; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0013018 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013018
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionCHCH domain-containing protein
Genome locationchr03:2848868..2853801
RNA-Seq ExpressionPI0013018
SyntenyPI0013018
Gene Ontology termsGO:0007005 - mitochondrion organization (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005739 - mitochondrion (cellular component)
InterPro domainsIPR009069 - Cysteine alpha-hairpin motif superfamily
IPR010625 - CHCH


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065106.1 coiled-coil-helix-coiled-coil-helix domain-containing protein 10 [Cucumis melo var. makuwa]1.6e-6293.79Show/hide
Query:  MPRRSSGGRSAPRPAPRAPLRNPPAPASSAPPPAPVQGGGGGGSLLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSASPVASNSGG
        MPRRSSGGRSAPRPA RAP RNPPAP +SAPPPAPVQ GGGGGS+LGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSA  VASNSGG
Subjt:  MPRRSSGGRSAPRPAPRAPLRNPPAPASSAPPPAPVQGGGGGGSLLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSASPVASNSGG

Query:  SDACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
        SDAC VQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
Subjt:  SDACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA

XP_008444901.1 PREDICTED: uncharacterized protein C6C3.02c-like [Cucumis melo]3.7e-6293.1Show/hide
Query:  MPRRSSGGRSAPRPAPRAPLRNPPAPASSAPPPAPVQGGGGGGSLLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSASPVASNSGG
        MPRRSSGGRSAPRPA RAP RNPPAP +SAPPPAPVQ GGGGGS+LGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSA  VA+NSGG
Subjt:  MPRRSSGGRSAPRPAPRAPLRNPPAPASSAPPPAPVQGGGGGGSLLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSASPVASNSGG

Query:  SDACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
        SDAC VQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
Subjt:  SDACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA

XP_011649682.1 hemiasterlin resistant protein 1 [Cucumis sativus]3.3e-6394.48Show/hide
Query:  MPRRSSGGRSAPRPAPRAPLRNPPAPASSAPPPAPVQGGGGGGSLLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSASPVASNSGG
        MPRRSSGGRSA RPAPRAPLRNPPAPAS APPPAPVQ GGGGGS+LGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHET+DSSASSA  VASNSGG
Subjt:  MPRRSSGGRSAPRPAPRAPLRNPPAPASSAPPPAPVQGGGGGGSLLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSASPVASNSGG

Query:  SDACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
        SDAC VQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
Subjt:  SDACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA

XP_022962551.1 coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial [Cucurbita moschata]2.5e-5889.04Show/hide
Query:  MPRRSSGGRSAPRPAPRAPLRNPPAPASSAPPPAPVQGGGGGGSLLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSASP-VASNSG
        MPRRSSGGRSA RPAPRAP RN PAPA SAPPPAPVQ GGGGGS+LGGLGATIAQGMAFGTGSAVAHRAVDAVMGPR IQHET+DSS  S++P VASN G
Subjt:  MPRRSSGGRSAPRPAPRAPLRNPPAPASSAPPPAPVQGGGGGGSLLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSASP-VASNSG

Query:  GSDACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
        GSDAC VQSKSFQDCLNHYGSDISKCQFYLDMLQECR+SSGSVLGA
Subjt:  GSDACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA

XP_038886373.1 coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial-like [Benincasa hispida]4.3e-6394.48Show/hide
Query:  MPRRSSGGRSAPRPAPRAPLRNPPAPASSAPPPAPVQGGGGGGSLLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSASPVASNSGG
        MPRRSSGGRSA RPAPRAPLRNPPAPASSAPPPAPVQ GGGGGS+LGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSS SSA  VA+N GG
Subjt:  MPRRSSGGRSAPRPAPRAPLRNPPAPASSAPPPAPVQGGGGGGSLLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSASPVASNSGG

Query:  SDACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
        SDACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
Subjt:  SDACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA

TrEMBL top hitse value%identityAlignment
A0A0A0LNY2 CHCH domain-containing protein1.6e-6394.48Show/hide
Query:  MPRRSSGGRSAPRPAPRAPLRNPPAPASSAPPPAPVQGGGGGGSLLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSASPVASNSGG
        MPRRSSGGRSA RPAPRAPLRNPPAPAS APPPAPVQ GGGGGS+LGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHET+DSSASSA  VASNSGG
Subjt:  MPRRSSGGRSAPRPAPRAPLRNPPAPASSAPPPAPVQGGGGGGSLLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSASPVASNSGG

Query:  SDACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
        SDAC VQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
Subjt:  SDACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA

A0A1S3BAZ1 uncharacterized protein C6C3.02c-like1.8e-6293.1Show/hide
Query:  MPRRSSGGRSAPRPAPRAPLRNPPAPASSAPPPAPVQGGGGGGSLLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSASPVASNSGG
        MPRRSSGGRSAPRPA RAP RNPPAP +SAPPPAPVQ GGGGGS+LGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSA  VA+NSGG
Subjt:  MPRRSSGGRSAPRPAPRAPLRNPPAPASSAPPPAPVQGGGGGGSLLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSASPVASNSGG

Query:  SDACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
        SDAC VQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
Subjt:  SDACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA

A0A5A7VFK2 Coiled-coil-helix-coiled-coil-helix domain-containing protein 108.0e-6393.79Show/hide
Query:  MPRRSSGGRSAPRPAPRAPLRNPPAPASSAPPPAPVQGGGGGGSLLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSASPVASNSGG
        MPRRSSGGRSAPRPA RAP RNPPAP +SAPPPAPVQ GGGGGS+LGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSA  VASNSGG
Subjt:  MPRRSSGGRSAPRPAPRAPLRNPPAPASSAPPPAPVQGGGGGGSLLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSASPVASNSGG

Query:  SDACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
        SDAC VQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
Subjt:  SDACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA

A0A6J1HDK4 coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial1.2e-5889.04Show/hide
Query:  MPRRSSGGRSAPRPAPRAPLRNPPAPASSAPPPAPVQGGGGGGSLLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSASP-VASNSG
        MPRRSSGGRSA RPAPRAP RN PAPA SAPPPAPVQ GGGGGS+LGGLGATIAQGMAFGTGSAVAHRAVDAVMGPR IQHET+DSS  S++P VASN G
Subjt:  MPRRSSGGRSAPRPAPRAPLRNPPAPASSAPPPAPVQGGGGGGSLLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSASP-VASNSG

Query:  GSDACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
        GSDAC VQSKSFQDCLNHYGSDISKCQFYLDMLQECR+SSGSVLGA
Subjt:  GSDACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA

A0A6J1K966 coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial-like3.5e-5888.36Show/hide
Query:  MPRRSSGGRSAPRPAPRAPLRNPPAPASSAPPPAPVQGGGGGGSLLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSASP-VASNSG
        MPRRSSGGRSA RPAPRAP RN PAPA+SAPPPAPVQ GGGGGS+LGGLGATIAQGMAFGTGSAVAHRAVDAVMGPR IQHET+DSS  S++P VA N G
Subjt:  MPRRSSGGRSAPRPAPRAPLRNPPAPASSAPPPAPVQGGGGGGSLLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSASP-VASNSG

Query:  GSDACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
        GSDAC VQSKSFQDCLNHYGSDISKCQFYLDMLQECR+SSGSVLGA
Subjt:  GSDACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G09570.1 Cox19-like CHCH family protein7.7e-3455.48Show/hide
Query:  MPRRSSGGRSAPRPAPRAPLRNPPAPA-SSAPPPAPVQGGGGGGSLLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSASPVASNSG
        MPR SSGGRS+ RP+  A  R+PP  + + APPPA  Q    GGS LG +GA+I +G+A+GTG+A  HR VD+VMGPRT +HET+ S   SA+   +   
Subjt:  MPRRSSGGRSAPRPAPRAPLRNPPAPA-SSAPPPAPVQGGGGGGSLLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSASPVASNSG

Query:  GSDACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
           AC + SK+FQDC+NH+GSDISKCQFY+DML EC+++SGSV+ A
Subjt:  GSDACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA

AT5G64400.1 CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625)6.3e-4464.14Show/hide
Query:  MPRRSSGGRSAPRPAPRAPLRNPPAPASSAPPPAPVQGGGGGGSLLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSASPVASNSGG
        M RRSSGGRSAPRP P A     P P   APPPAP Q  GGGG +  G+G+TIAQGMAFGTGSAVAHRAVD+VMGPRTIQHE ++++++SA+P A ++  
Subjt:  MPRRSSGGRSAPRPAPRAPLRNPPAPASSAPPPAPVQGGGGGGSLLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSASPVASNSGG

Query:  SDACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
        S  C + +K+FQDC+  YGS+ISKCQFY+DML ECR++SGSV+GA
Subjt:  SDACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA

AT5G64400.2 BEST Arabidopsis thaliana protein match is: Cox19-like CHCH family protein (TAIR:AT5G09570.1)1.1e-2761.95Show/hide
Query:  MPRRSSGGRSAPRPAPRAPLRNPPAPASSAPPPAPVQGGGGGGSLLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSASPVASNSGG
        M RRSSGGRSAPRP P A     P P   APPPAP Q  GGGG +  G+G+TIAQGMAFGTGSAVAHRAVD+VMGPRTIQHE ++++++SA+P A ++  
Subjt:  MPRRSSGGRSAPRPAPRAPLRNPPAPASSAPPPAPVQGGGGGGSLLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSASPVASNSGG

Query:  SDACTVQSKSFQD
        S  C + +K+FQD
Subjt:  SDACTVQSKSFQD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCGTCGTAGCTCCGGTGGACGATCTGCTCCCCGTCCCGCCCCTCGCGCTCCTCTTCGCAATCCACCGGCGCCAGCTAGTTCCGCTCCTCCACCTGCACCTGTACA
AGGTGGTGGTGGTGGTGGTTCATTGCTTGGAGGTCTTGGTGCCACTATTGCTCAAGGTATGGCCTTTGGTACCGGAAGTGCAGTGGCTCACAGGGCTGTTGATGCCGTAA
TGGGTCCTCGAACCATCCAGCATGAGACCATTGATTCATCAGCTTCCTCAGCATCTCCGGTAGCAAGCAATTCTGGTGGTTCTGATGCTTGTACTGTTCAGTCAAAGTCC
TTTCAAGATTGCCTGAACCACTACGGAAGTGACATCAGCAAGTGCCAATTCTACTTGGATATGTTGCAGGAATGCCGCAGGAGCTCAGGTTCTGTTTTGGGTGCTTAA
mRNA sequenceShow/hide mRNA sequence
GCAGTTGTGAAAACAGAAAAGAGGGGAAAGAACATTCGAGAATAGTTCGTTGGTCTCATCTAGGTTCGCTTGTGGTGCAAAAAGAGGAAAATAGAACCACGTGGCCATCT
CCAATTGGTAGATTACGTGATTTTTGTATTTGTCAACTCGCTGTTTAGAAAACTAAACGGAAACTCCTAGAATCTGGGTCCCTATATAAACCCCAATAAAGTGGAATTCG
ACCGCAAATTAGTAACCCTAAAATTTCAGATCTCATTACTGCAAGAGACATCTACCGCCATTCTTTTACTTTTCTTCTACGCAGTCGCCCTATCTTATAATCCTTAACCA
TGCCTCGTCGTAGCTCCGGTGGACGATCTGCTCCCCGTCCCGCCCCTCGCGCTCCTCTTCGCAATCCACCGGCGCCAGCTAGTTCCGCTCCTCCACCTGCACCTGTACAA
GGTGGTGGTGGTGGTGGTTCATTGCTTGGAGGTCTTGGTGCCACTATTGCTCAAGGTATGGCCTTTGGTACCGGAAGTGCAGTGGCTCACAGGGCTGTTGATGCCGTAAT
GGGTCCTCGAACCATCCAGCATGAGACCATTGATTCATCAGCTTCCTCAGCATCTCCGGTAGCAAGCAATTCTGGTGGTTCTGATGCTTGTACTGTTCAGTCAAAGTCCT
TTCAAGATTGCCTGAACCACTACGGAAGTGACATCAGCAAGTGCCAATTCTACTTGGATATGTTGCAGGAATGCCGCAGGAGCTCAGGTTCTGTTTTGGGTGCTTAAAAT
AATTGGTTTTTAGAACAATCATTTATTCACTCCTTTTCATTTGGATGTAACCGCAAGGAGCGGTGTCAAGTTTATTGTGTGTTTTGACAGTGTTTTCACTTTACGGCTAC
TTCTCTACAACTATAAAATGGTGTTTAATGATGAAACGCTTCATCATTTGGACTCAATTGTTATGGCTTTTGAGTTTTGGGTCTTCCCTTGAGAATTTAAAAATGATGTT
TGGATTTTTAAACATCTACTTGATGAATAATGCAAAAATTAACTGTATTGAATACAGTCGCACACATACAGAAGATCTAATATGCCTGTGTAATTGGCTTTTGTCTAATT
CAATATATTAGACAGCTATGTGTATTTTCTTTTTAAACGCTCAAATATTTCTATTTTATTAAGTTTAGGTTGATGTGAATTAGAACCCCCGAAAACCCCGAAACCGACGA
AATTTGAAGTTAAAGGTTAAAATGAATTAACGAATGCCCAAGTATTGAGGTTAAGTTGAAGAATTTAAAAATATAGGGTCGTTTGGGTGG
Protein sequenceShow/hide protein sequence
MPRRSSGGRSAPRPAPRAPLRNPPAPASSAPPPAPVQGGGGGGSLLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSASPVASNSGGSDACTVQSKS
FQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA