CuGenDBv2

Gene ID	PI0013019
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2, 6-diaminopimelate ligase
Genome location	chr11:29511287..29513350
RNA-Seq Expression	PI0013019
Synteny	PI0013019
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6605258.1 hypothetical protein SDJN03_02575, partial [Cucurbita argyrosperma subsp. sororia]

3.4e-70

83.71

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Query:  MSDREDTDSDAPEEFTAEQGVLQDEEIRKVQKESKARVVREGKERRRLWAEKKTPRQSKKGEIVEDLAELPREDDQISKLGTLPSNIVQLLVDREKQVFS
        MSD  DTDSDAPEEFTAEQG+ QDEEIRKVQKES ARVVREGKERRR WAEKKTPR SKKGE VED+AE PR +DQ+SKLG LPSN+VQLL +REKQVFS
Subjt:  MSDREDTDSDAPEEFTAEQGVLQDEEIRKVQKESKARVVREGKERRRLWAEKKTPRQSKKGEIVEDLAELPREDDQISKLGTLPSNIVQLLVDREKQVFS

Query:  SDPGDEKPAIKPKQKRKKTKSSGIETVLLSERTPSHCLQNSLEFLKKRKMNITRSSTVLDNPNQAFRLLSSSGLLTKK
        SDPGDEKPA K K KRKK+KSSGI+TVLL+ER PS CLQNSLEFLKKRKMNI RSS+VLDN NQA RLLSSSGLLTKK
Subjt:  SDPGDEKPAIKPKQKRKKTKSSGIETVLLSERTPSHCLQNSLEFLKKRKMNITRSSTVLDNPNQAFRLLSSSGLLTKK

KAG7035221.1 hypothetical protein SDJN02_02016, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.2e-70

84.27

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Query:  MSDREDTDSDAPEEFTAEQGVLQDEEIRKVQKESKARVVREGKERRRLWAEKKTPRQSKKGEIVEDLAELPREDDQISKLGTLPSNIVQLLVDREKQVFS
        MSD  DTDSDAPEEFTAEQG+ QDEEIRKVQKES ARVVREGKERRR WAEKKTPR SKKGE VED+AE PR +DQ+SKLG LPSN+VQLL +REKQVFS
Subjt:  MSDREDTDSDAPEEFTAEQGVLQDEEIRKVQKESKARVVREGKERRRLWAEKKTPRQSKKGEIVEDLAELPREDDQISKLGTLPSNIVQLLVDREKQVFS

Query:  SDPGDEKPAIKPKQKRKKTKSSGIETVLLSERTPSHCLQNSLEFLKKRKMNITRSSTVLDNPNQAFRLLSSSGLLTKK
        SDPGDEKPA K K KRKK+KSSGIETVLL+ER PS CLQNSLEFLKKRKMNI RSS+VLDN NQA RLLSSSGLLTKK
Subjt:  SDPGDEKPAIKPKQKRKKTKSSGIETVLLSERTPSHCLQNSLEFLKKRKMNITRSSTVLDNPNQAFRLLSSSGLLTKK

XP_004148046.1 uncharacterized protein LOC101208336 [Cucumis sativus]

3.7e-80

93.26

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Query:  MSDREDTDSDAPEEFTAEQGVLQDEEIRKVQKESKARVVREGKERRRLWAEKKTPRQSKKGEIVEDLAELPREDDQISKLGTLPSNIVQLLVDREKQVFS
        MSDRE+TDSDAPEEFTAEQGV QDEEIRKVQKESKARV+REGKERRRLWAEKKTPR SKKGEIVEDLAE PR DD+ISKLGTLPSNIVQLLVDREKQVFS
Subjt:  MSDREDTDSDAPEEFTAEQGVLQDEEIRKVQKESKARVVREGKERRRLWAEKKTPRQSKKGEIVEDLAELPREDDQISKLGTLPSNIVQLLVDREKQVFS

Query:  SDPGDEKPAIKPKQKRKKTKSSGIETVLLSERTPSHCLQNSLEFLKKRKMNITRSSTVLDNPNQAFRLLSSSGLLTKK
        SD GDEKPAIKPKQKRKKTKSSGIETVLL+ERTPSHCLQNSLEFLKKRKMN+ RSSTVL NPNQAFRLLSSSGLLTKK
Subjt:  SDPGDEKPAIKPKQKRKKTKSSGIETVLLSERTPSHCLQNSLEFLKKRKMNITRSSTVLDNPNQAFRLLSSSGLLTKK

XP_008457855.1 PREDICTED: uncharacterized protein LOC103497440 [Cucumis melo]

3.4e-78

91.62

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Query:  MSDREDTDSDAPEEFTAEQGVLQDEEIRKVQKESKARVVREGKERRRLWAEKKTPRQSKKGEIVEDLAELPREDDQISKLGTLPSNIVQLLVDREKQVFS
        MSDRE+TDSDAPEEFTAEQGV QDEEIRKVQ ESKARV+REGKERRRLWAEKKTPR SKKGEIVEDLAE PR DD++SKLGTLPSN+VQLLVDREKQVFS
Subjt:  MSDREDTDSDAPEEFTAEQGVLQDEEIRKVQKESKARVVREGKERRRLWAEKKTPRQSKKGEIVEDLAELPREDDQISKLGTLPSNIVQLLVDREKQVFS

Query:  SDPGDEKPAIKPKQKRKKTK-SSGIETVLLSERTPSHCLQNSLEFLKKRKMNITRSSTVLDNPNQAFRLLSSSGLLTKK
        SD GDEKPAIKPKQKRKKTK SSGIETVLLSERTPSHCLQNSLEFLKKRKMN+ RSSTVL+NPNQAFRLLSSSGLLTKK
Subjt:  SDPGDEKPAIKPKQKRKKTK-SSGIETVLLSERTPSHCLQNSLEFLKKRKMNITRSSTVLDNPNQAFRLLSSSGLLTKK

XP_038901892.1 uncharacterized protein LOC120088571 [Benincasa hispida]

1.2e-75

91.06

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Query:  MSDREDTDSDAPEEFTAEQGVLQDEEIRKVQKESKARVVREGKERRRLWAEKKTPRQSKKGEIVEDLAELPRE-DDQISKLGTLPSNIVQLLVDREKQVF
        MSDREDTDSDAPEEFTAEQGV QDEEIRKVQKESKARVVREGKERRRLWAEKKTPR SKKGE VEDLAE PR+  DQISKLG LPSNIVQLLVDREKQVF
Subjt:  MSDREDTDSDAPEEFTAEQGVLQDEEIRKVQKESKARVVREGKERRRLWAEKKTPRQSKKGEIVEDLAELPRE-DDQISKLGTLPSNIVQLLVDREKQVF

Query:  SSDPGDEKPAIKPKQKRKKTKSSGIETVLLSERTPSHCLQNSLEFLKKRKMNITRSSTVLDNPNQAFRLLSSSGLLTKK
        SSDP DEKPAIKPK KRKKTKSSGIETVLLSERTPS CL NSLEFLKKRKMNITRSS+VLDNPNQA RLLS+SGLL KK
Subjt:  SSDPGDEKPAIKPKQKRKKTKSSGIETVLLSERTPSHCLQNSLEFLKKRKMNITRSSTVLDNPNQAFRLLSSSGLLTKK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LM07 Uncharacterized protein

1.8e-80

93.26

Show/hide

Query:  MSDREDTDSDAPEEFTAEQGVLQDEEIRKVQKESKARVVREGKERRRLWAEKKTPRQSKKGEIVEDLAELPREDDQISKLGTLPSNIVQLLVDREKQVFS
        MSDRE+TDSDAPEEFTAEQGV QDEEIRKVQKESKARV+REGKERRRLWAEKKTPR SKKGEIVEDLAE PR DD+ISKLGTLPSNIVQLLVDREKQVFS
Subjt:  MSDREDTDSDAPEEFTAEQGVLQDEEIRKVQKESKARVVREGKERRRLWAEKKTPRQSKKGEIVEDLAELPREDDQISKLGTLPSNIVQLLVDREKQVFS

Query:  SDPGDEKPAIKPKQKRKKTKSSGIETVLLSERTPSHCLQNSLEFLKKRKMNITRSSTVLDNPNQAFRLLSSSGLLTKK
        SD GDEKPAIKPKQKRKKTKSSGIETVLL+ERTPSHCLQNSLEFLKKRKMN+ RSSTVL NPNQAFRLLSSSGLLTKK
Subjt:  SDPGDEKPAIKPKQKRKKTKSSGIETVLLSERTPSHCLQNSLEFLKKRKMNITRSSTVLDNPNQAFRLLSSSGLLTKK

A0A1S3C749 uncharacterized protein LOC103497440

1.7e-78

91.62

Show/hide

Query:  MSDREDTDSDAPEEFTAEQGVLQDEEIRKVQKESKARVVREGKERRRLWAEKKTPRQSKKGEIVEDLAELPREDDQISKLGTLPSNIVQLLVDREKQVFS
        MSDRE+TDSDAPEEFTAEQGV QDEEIRKVQ ESKARV+REGKERRRLWAEKKTPR SKKGEIVEDLAE PR DD++SKLGTLPSN+VQLLVDREKQVFS
Subjt:  MSDREDTDSDAPEEFTAEQGVLQDEEIRKVQKESKARVVREGKERRRLWAEKKTPRQSKKGEIVEDLAELPREDDQISKLGTLPSNIVQLLVDREKQVFS

Query:  SDPGDEKPAIKPKQKRKKTK-SSGIETVLLSERTPSHCLQNSLEFLKKRKMNITRSSTVLDNPNQAFRLLSSSGLLTKK
        SD GDEKPAIKPKQKRKKTK SSGIETVLLSERTPSHCLQNSLEFLKKRKMN+ RSSTVL+NPNQAFRLLSSSGLLTKK
Subjt:  SDPGDEKPAIKPKQKRKKTK-SSGIETVLLSERTPSHCLQNSLEFLKKRKMNITRSSTVLDNPNQAFRLLSSSGLLTKK

A0A5A7TWK6 Uncharacterized protein

1.7e-78

91.62

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Query:  MSDREDTDSDAPEEFTAEQGVLQDEEIRKVQKESKARVVREGKERRRLWAEKKTPRQSKKGEIVEDLAELPREDDQISKLGTLPSNIVQLLVDREKQVFS
        MSDRE+TDSDAPEEFTAEQGV QDEEIRKVQ ESKARV+REGKERRRLWAEKKTPR SKKGEIVEDLAE PR DD++SKLGTLPSN+VQLLVDREKQVFS
Subjt:  MSDREDTDSDAPEEFTAEQGVLQDEEIRKVQKESKARVVREGKERRRLWAEKKTPRQSKKGEIVEDLAELPREDDQISKLGTLPSNIVQLLVDREKQVFS

Query:  SDPGDEKPAIKPKQKRKKTK-SSGIETVLLSERTPSHCLQNSLEFLKKRKMNITRSSTVLDNPNQAFRLLSSSGLLTKK
        SD GDEKPAIKPKQKRKKTK SSGIETVLLSERTPSHCLQNSLEFLKKRKMN+ RSSTVL+NPNQAFRLLSSSGLLTKK
Subjt:  SDPGDEKPAIKPKQKRKKTK-SSGIETVLLSERTPSHCLQNSLEFLKKRKMNITRSSTVLDNPNQAFRLLSSSGLLTKK

A0A6J1DXW1 uncharacterized protein LOC111025162

1.1e-69

83.05

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Query:  MSDREDTDSDAPEEFTAEQGVLQDEEIRKVQKESKARVVREGKERRRLWAEKKTPRQSKKGEIVEDLAELPREDDQISKLGTLPSNIVQLLVDREKQVFS
        MSD EDTDSDAPEEFTAEQG+ QD+EI KVQ ESKARVVREGKERRRLWAEKKTPR SKKGE VED+AE+P   DQ SKLG LPSN+VQLL DREKQVFS
Subjt:  MSDREDTDSDAPEEFTAEQGVLQDEEIRKVQKESKARVVREGKERRRLWAEKKTPRQSKKGEIVEDLAELPREDDQISKLGTLPSNIVQLLVDREKQVFS

Query:  SDPGDEKPAIKPKQKRKKTKSSGIETVLLSERTPSHCLQNSLEFLKKRKMNITRSSTVLDNPNQAFRLLSSSGLLTK
        SDPGDEKPA KPK KRKKTKSSGIETV+L++R P+ CLQNS+EFLKKRKMNI RSS+VLDNPNQA R LSSSGLLTK
Subjt:  SDPGDEKPAIKPKQKRKKTKSSGIETVLLSERTPSHCLQNSLEFLKKRKMNITRSSTVLDNPNQAFRLLSSSGLLTK

A0A6J1G7P4 uncharacterized protein LOC111451498

3.7e-70

83.71

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Query:  MSDREDTDSDAPEEFTAEQGVLQDEEIRKVQKESKARVVREGKERRRLWAEKKTPRQSKKGEIVEDLAELPREDDQISKLGTLPSNIVQLLVDREKQVFS
        MSD  DTDSDAPEEFTAEQG+ QDEEIRKVQKES ARVVREGKERRR WAEKKTPR SKK E VED+AE PR +DQ+SKLG LPSN+VQLL +REKQVFS
Subjt:  MSDREDTDSDAPEEFTAEQGVLQDEEIRKVQKESKARVVREGKERRRLWAEKKTPRQSKKGEIVEDLAELPREDDQISKLGTLPSNIVQLLVDREKQVFS

Query:  SDPGDEKPAIKPKQKRKKTKSSGIETVLLSERTPSHCLQNSLEFLKKRKMNITRSSTVLDNPNQAFRLLSSSGLLTKK
        SDPGDEKPA K K KRKK+KSSGIETVLL+ER PS CLQNSLEFLKKRKMNI RSS+VLDN NQA RLLSSSGLLTKK
Subjt:  SDPGDEKPAIKPKQKRKKTKSSGIETVLLSERTPSHCLQNSLEFLKKRKMNITRSSTVLDNPNQAFRLLSSSGLLTKK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G37090.1 unknown protein

6.3e-30

45.9

Show/hide

Query:  MSDRE--DTDSDAPEEFTAEQGVLQDEEIRKVQKESKARVVREGKERRRLWAEKKTPRQSKKGEIVEDLA--ELPREDDQ-ISKLGTLPSNIVQLLVDRE
        MSD +  D+DSDAPEE T EQ  L++E + K+Q+E+K RV RE KERR+L AE+ T R+S+K EI+ED+   E P E+ + ++  G L  +I+  L +RE
Subjt:  MSDRE--DTDSDAPEEFTAEQGVLQDEEIRKVQKESKARVVREGKERRRLWAEKKTPRQSKKGEIVEDLA--ELPREDDQ-ISKLGTLPSNIVQLLVDRE

Query:  KQVFSSDPGDEKPAIKPKQKRKKTKSSGIETVLLSERTPSHCLQNSLEFLKKRKMNITRSSTVLDNPNQAFRLLSSSGLLTKK
        KQ   SD  +E+  I    ++KK KSSGIETV+  E  P  CL+  L+FLK R+  + RSS+V+ N  QA RL + + L  K+
Subjt:  KQVFSSDPGDEKPAIKPKQKRKKTKSSGIETVLLSERTPSHCLQNSLEFLKKRKMNITRSSTVLDNPNQAFRLLSSSGLLTKK

AT4G37090.2 unknown protein

1.6e-28

45.9

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Query:  MSDRE--DTDSDAPEEFTAEQGVLQDEEIRKVQKESKARVVREGKERRRLWAEKKTPRQSKKGEIVEDLA--ELPREDDQ-ISKLGTLPSNIVQLLVDRE
        MSD +  D+DSDAPEE T EQ  L++E + K+Q+E+K RV RE KERR+L AE+ T R+S+K EI+ED+   E P E+ + ++  G L  +I+  L +RE
Subjt:  MSDRE--DTDSDAPEEFTAEQGVLQDEEIRKVQKESKARVVREGKERRRLWAEKKTPRQSKKGEIVEDLA--ELPREDDQ-ISKLGTLPSNIVQLLVDRE

Query:  KQVFSSDPGDEKPAIKPKQKRKKTKSSGIETVLLSERTPSHCLQNSLEFLKKRKMNITRSSTVLDNPNQAFRLLSSSGLLTKK
        KQ   SD  +E+  I    ++KK KSSGIETV+  E  P  CL+  L+FLK R+  + RSS+V+ N  QA RL + + L  K+
Subjt:  KQVFSSDPGDEKPAIKPKQKRKKTKSSGIETVLLSERTPSHCLQNSLEFLKKRKMNITRSSTVLDNPNQAFRLLSSSGLLTKK

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTCGGACAGAGAAGATACCGATTCGGACGCTCCCGAGGAGTTCACCGCCGAGCAGGGAGTACTACAGGATGAAGAGATTAGAAAAGTTCAAAAAGAAAGTAAGGCTAG
GGTTGTTCGTGAAGGAAAAGAACGACGTAGACTATGGGCTGAAAAGAAAACACCACGCCAATCAAAAAAGGGTGAAATCGTTGAAGATTTAGCAGAACTCCCTAGAGAGG
ACGATCAAATTAGCAAGTTGGGAACGCTTCCTAGTAATATAGTCCAACTGCTTGTAGACCGCGAGAAACAAGTTTTCTCATCAGATCCAGGCGACGAAAAGCCTGCAATT
AAACCAAAACAAAAGAGGAAGAAAACCAAAAGCTCCGGGATTGAAACGGTTCTTTTAAGCGAAAGAACACCATCTCATTGTTTACAGAACTCCTTGGAATTTTTGAAGAA
AAGAAAGATGAATATTACAAGATCATCAACAGTTCTCGACAATCCTAACCAAGCGTTCCGACTACTTTCTTCATCTGGCTTACTAACGAAGAAATAG

mRNA sequence

Show/hide mRNA sequence

ATTTGTTTCTTCAAATCTTTTCACGGAAACCCTAAAAGAAGAGTTGGGTTTTAATGTCGGACAGAGAAGATACCGATTCGGACGCTCCCGAGGAGTTCACCGCCGAGCAG
GGAGTACTACAGGATGAAGAGATTAGAAAAGTTCAAAAAGAAAGTAAGGCTAGGGTTGTTCGTGAAGGAAAAGAACGACGTAGACTATGGGCTGAAAAGAAAACACCACG
CCAATCAAAAAAGGGTGAAATCGTTGAAGATTTAGCAGAACTCCCTAGAGAGGACGATCAAATTAGCAAGTTGGGAACGCTTCCTAGTAATATAGTCCAACTGCTTGTAG
ACCGCGAGAAACAAGTTTTCTCATCAGATCCAGGCGACGAAAAGCCTGCAATTAAACCAAAACAAAAGAGGAAGAAAACCAAAAGCTCCGGGATTGAAACGGTTCTTTTA
AGCGAAAGAACACCATCTCATTGTTTACAGAACTCCTTGGAATTTTTGAAGAAAAGAAAGATGAATATTACAAGATCATCAACAGTTCTCGACAATCCTAACCAAGCGTT
CCGACTACTTTCTTCATCTGGCTTACTAACGAAGAAATAGCATTTTTGTTCCATAGTTTATTTATTGCATCTCTTTTAGCTTTGACAAGACAATGTATAATTGTATTCGA
GAATTGGTTGGCGAGGGCTACAAAGGTTGTTGAGTTCTTATAATGAATCATACCATAGTAGAAATTGAAAATGGTGAGAGCATTGATGTTGGTAAATTAATGATATTCAT
TATGTTGGTTCGATTA

Protein sequence

Show/hide protein sequence

MSDREDTDSDAPEEFTAEQGVLQDEEIRKVQKESKARVVREGKERRRLWAEKKTPRQSKKGEIVEDLAELPREDDQISKLGTLPSNIVQLLVDREKQVFSSDPGDEKPAI
KPKQKRKKTKSSGIETVLLSERTPSHCLQNSLEFLKKRKMNITRSSTVLDNPNQAFRLLSSSGLLTKK

PI0013019 (gene) of Melon (PI 482460) v1 genome