CuGenDBv2

Gene ID	PI0013022
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Rhamnogalacturonan endolyase
Genome location	chr03:2823001..2831275
RNA-Seq Expression	PI0013022
Synteny	PI0013022
Gene Ontology terms	GO:0005975 - carbohydrate metabolic process (biological process) GO:0005576 - extracellular region (cellular component) GO:0030246 - carbohydrate binding (molecular function) GO:0102210 - rhamnogalacturonan endolyase activity (molecular function)
InterPro domains	IPR008979 - Galactose-binding-like domain superfamily IPR010325 - Rhamnogalacturonate lyase IPR011013 - Galactose mutarotase-like domain superfamily IPR013784 - Carbohydrate-binding-like fold IPR014718 - Glycoside hydrolase-type carbohydrate-binding IPR029411 - Rhamnogalacturonan lyase, domain III IPR029413 - Rhamnogalacturonan lyase, domain II

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0065109.1 putative rhamnogalacturonate lyase B isoform X1 [Cucumis melo var. makuwa]

0.0e+00

94.78

Show/hide

Query:  MPPRGVQLSITERQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNVLEVLNDESNRGYWDLVWSSSSSTTGLFDVIKATGFEVIVENEEQVELSFTRTWDLS
        MPP GVQL ITERQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNVLEVLNDE+NRGYWDLVWSSSSS+TGLFDVIKATGF+VIVENEEQVELSFTRTWDLS
Subjt:  MPPRGVQLSITERQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNVLEVLNDESNRGYWDLVWSSSSSTTGLFDVIKATGFEVIVENEEQVELSFTRTWDLS

Query:  LEGKLVPLEIDKRFIMLRGSSGFYSYAIYQHPEEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRYMPLPDDRSPPRGRALAYPEAVLLVDPIEPEFQGE
        LEGKLVPLEIDKRFIMLRGSSGFYSYAIYQH EEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRYMPLPDDRSPPRGRALAYPEAV L+DPIEPE QGE
Subjt:  LEGKLVPLEIDKRFIMLRGSSGFYSYAIYQHPEEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRYMPLPDDRSPPRGRALAYPEAVLLVDPIEPEFQGE

Query:  VDDKYQYSCDNKDSGVHGWISTDPAVGFWLISPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSFDAL
        VDDKYQYSCDNKDSGVHGWISTDP VGFWLISPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSFDAL
Subjt:  VDDKYQYSCDNKDSGVHGWISTDPAVGFWLISPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSFDAL

Query:  QLWEDAKAQAVIEVQSWPYSFPASGDFPKSNQRGSINGRLLIKDSYVNEDLMPADGAFVGLAPPGDVGSWQRESKGYQFWSRADESGNFFIDGVRPGDYN
        QLWEDAKAQA IEVQSWPYSFPAS DFP+SNQRGSI+G+LL+KDSYV+EDL+PA GAFVGLAPPGDVGSWQRESKGYQFWSRADESGNFFIDG RPGDYN
Subjt:  QLWEDAKAQAVIEVQSWPYSFPASGDFPKSNQRGSINGRLLIKDSYVNEDLMPADGAFVGLAPPGDVGSWQRESKGYQFWSRADESGNFFIDGVRPGDYN

Query:  LYAWVPGYIGDYRYDALINLTEGSEMDMGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSELYPDSDLVYTVGL
        LYAWVPG+IGDYRYDALINL EGSE+DMGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNY+NKLYLNHPDKFRQYGLWERYSEL+PDSDLVY VG+
Subjt:  LYAWVPGYIGDYRYDALINLTEGSEMDMGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSELYPDSDLVYTVGL

Query:  SDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDNVDNQATYKLRVALASASLAELQ
        SDYTKDWFFAQVPR +ENGTYKGTTWQVKFELDNVDNQATYKLRVALASASLAELQ
Subjt:  SDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDNVDNQATYKLRVALASASLAELQ

XP_004152608.2 probable rhamnogalacturonate lyase B isoform X1 [Cucumis sativus]

0.0e+00

96.58

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Query:  MPPRGVQLSITERQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNVLEVLNDESNRGYWDLVWSSSSSTTGLFDVIKATGFEVIVENEEQVELSFTRTWDLS
        MPP GVQL ITERQVTMDNGIVQVTLSNPDGIVTGIRY GVDNVLEVLNDESNRGYWDLVWSSSSSTTGLFDVIKATGFEVIVENEEQVELSFTRTWDLS
Subjt:  MPPRGVQLSITERQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNVLEVLNDESNRGYWDLVWSSSSSTTGLFDVIKATGFEVIVENEEQVELSFTRTWDLS

Query:  LEGKLVPLEIDKRFIMLRGSSGFYSYAIYQHPEEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRYMPLPDDRSPPRGRALAYPEAVLLVDPIEPEFQGE
        LEGKLVPLEIDKRFIMLRGSSGFYSYAIYQH EEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRYMPLPDDRSPPRGRALAYPEAVLLVDPIEPE QGE
Subjt:  LEGKLVPLEIDKRFIMLRGSSGFYSYAIYQHPEEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRYMPLPDDRSPPRGRALAYPEAVLLVDPIEPEFQGE

Query:  VDDKYQYSCDNKDSGVHGWISTDPAVGFWLISPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSFDAL
        VDDKYQYSCDNKDSGVHGWISTDPAVGFWLISPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSFDAL
Subjt:  VDDKYQYSCDNKDSGVHGWISTDPAVGFWLISPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSFDAL

Query:  QLWEDAKAQAVIEVQSWPYSFPASGDFPKSNQRGSINGRLLIKDSYVNEDLMPADGAFVGLAPPGDVGSWQRESKGYQFWSRADESGNFFIDGVRPGDYN
        QLWEDAKAQAVIEVQSWPYSFPAS DFP+SNQR SI+G+LL+KDSYVNEDL+PADGAFVGLAPPGDVGSWQRESKGYQFWSRADESGNF IDGVRPGDYN
Subjt:  QLWEDAKAQAVIEVQSWPYSFPASGDFPKSNQRGSINGRLLIKDSYVNEDLMPADGAFVGLAPPGDVGSWQRESKGYQFWSRADESGNFFIDGVRPGDYN

Query:  LYAWVPGYIGDYRYDALINLTEGSEMDMGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSELYPDSDLVYTVGL
        LYAWVPG+IGDYRYDALINLTEGSE+DMGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSEL+PDSDLVYTVG+
Subjt:  LYAWVPGYIGDYRYDALINLTEGSEMDMGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSELYPDSDLVYTVGL

Query:  SDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDNVDNQATYKLRVALASASLAELQ
        SDYTKDWFFAQVPRKMENGTYKGTTWQVKFELD+VDNQATYKLRVALAS SLAELQ
Subjt:  SDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDNVDNQATYKLRVALASASLAELQ

XP_008444895.1 PREDICTED: probable rhamnogalacturonate lyase B isoform X1 [Cucumis melo]

0.0e+00

94.96

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Query:  MPPRGVQLSITERQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNVLEVLNDESNRGYWDLVWSSSSSTTGLFDVIKATGFEVIVENEEQVELSFTRTWDLS
        MPP GVQL ITERQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNVLEVLNDE+NRGYWDLVWSSSSS+TGLFDVIKATGF+VIVENEEQVELSFTRTWDLS
Subjt:  MPPRGVQLSITERQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNVLEVLNDESNRGYWDLVWSSSSSTTGLFDVIKATGFEVIVENEEQVELSFTRTWDLS

Query:  LEGKLVPLEIDKRFIMLRGSSGFYSYAIYQHPEEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRYMPLPDDRSPPRGRALAYPEAVLLVDPIEPEFQGE
        LEGKLVPLEIDKRFIMLRGSSGFYSYAIYQH EEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRYMPLPDDRSPPRGRALAYPEAV L+DPIEPE QGE
Subjt:  LEGKLVPLEIDKRFIMLRGSSGFYSYAIYQHPEEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRYMPLPDDRSPPRGRALAYPEAVLLVDPIEPEFQGE

Query:  VDDKYQYSCDNKDSGVHGWISTDPAVGFWLISPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSFDAL
        VDDKYQYSCDNKDSGVHGWISTDP VGFWLISPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSFDAL
Subjt:  VDDKYQYSCDNKDSGVHGWISTDPAVGFWLISPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSFDAL

Query:  QLWEDAKAQAVIEVQSWPYSFPASGDFPKSNQRGSINGRLLIKDSYVNEDLMPADGAFVGLAPPGDVGSWQRESKGYQFWSRADESGNFFIDGVRPGDYN
        QLWEDAKAQA +EVQSWPYSFPAS DFP+SNQRGSI+G+LL+KDSYV+EDL+PA GAFVGLAPPGDVGSWQRESKGYQFWSRADESGNFFIDGVRPGDYN
Subjt:  QLWEDAKAQAVIEVQSWPYSFPASGDFPKSNQRGSINGRLLIKDSYVNEDLMPADGAFVGLAPPGDVGSWQRESKGYQFWSRADESGNFFIDGVRPGDYN

Query:  LYAWVPGYIGDYRYDALINLTEGSEMDMGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSELYPDSDLVYTVGL
        LYAWVPG+IGDYRYDALINL EGSE+DMGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNY+NKLYLNHPDKFRQYGLWERYSEL+PDSDLVY VG+
Subjt:  LYAWVPGYIGDYRYDALINLTEGSEMDMGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSELYPDSDLVYTVGL

Query:  SDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDNVDNQATYKLRVALASASLAELQ
        SDYTKDWFFAQVPRK+ENGTYKGTTWQVKFELDNVDNQATYKLRVALASASLAELQ
Subjt:  SDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDNVDNQATYKLRVALASASLAELQ

XP_023537007.1 probable rhamnogalacturonate lyase B isoform X1 [Cucurbita pepo subsp. pepo]

4.0e-306

89.57

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Query:  MPPRGVQLSITERQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNVLEVLNDESNRGYWDLVWSSSSSTTGLFDVIKATGFEVIVENEEQVELSFTRTWDLS
        MPP GVQLSI E QVTMDNGIVQVTLSNPDGIVTGIRYNGVDN+LEVLNDESNRGYWDLVW+ S+S TG FDVIKAT FEVIVENE+QVELSFTR WDLS
Subjt:  MPPRGVQLSITERQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNVLEVLNDESNRGYWDLVWSSSSSTTGLFDVIKATGFEVIVENEEQVELSFTRTWDLS

Query:  LEGKLVPLEIDKRFIMLRGSSGFYSYAIYQHPEEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRYMPLPDDRSPPRGRALAYPEAVLLVDPIEPEFQGE
        LEGKLVPLEIDKRFIMLRGSSGFYSYAIYQH +EWPGFNLGETRLAFKLRKD+FHYMAMADNRQR MPLPDDRSPPRGRALAYPEAVLLVDPIE E QGE
Subjt:  LEGKLVPLEIDKRFIMLRGSSGFYSYAIYQHPEEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRYMPLPDDRSPPRGRALAYPEAVLLVDPIEPEFQGE

Query:  VDDKYQYSCDNKDSGVHGWISTDPAVGFWLISPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSFDAL
        VDDKYQYSCDNKDSGVHGWISTDP +GFWLI+PSNE RSGGPVKQNLTSHVGPTTLAVFISAHY GEDLVPKIGAGEAWKKVFGPVFIYLNSTYDS DAL
Subjt:  VDDKYQYSCDNKDSGVHGWISTDPAVGFWLISPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSFDAL

Query:  QLWEDAKAQAVIEVQSWPYSFPASGDFPKSNQRGSINGRLLIKDSYVNEDLMPADGAFVGLAPPGDVGSWQRESKGYQFWSRADESGNFFIDGVRPGDYN
        QLWED K+QA IEVQSWPYSFPAS DFPKSNQRG+I+GRLL+KDSYV+ED +PA+GAFVGLAPPGDVGSWQRESKGYQFWSRADE G F ID VRPGDYN
Subjt:  QLWEDAKAQAVIEVQSWPYSFPASGDFPKSNQRGSINGRLLIKDSYVNEDLMPADGAFVGLAPPGDVGSWQRESKGYQFWSRADESGNFFIDGVRPGDYN

Query:  LYAWVPGYIGDYRYDALINLTEGSEMDMGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSELYPDSDLVYTVGL
        LYAWVPG+IGDYRYD++IN+TEGS++D+ +I YEPPR GATLWEIG+PDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSELYPD+DLVYTVG+
Subjt:  LYAWVPGYIGDYRYDALINLTEGSEMDMGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSELYPDSDLVYTVGL

Query:  SDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDNVDNQATYKLRVALASASLAELQ
        SDYTKDWFFAQV RK ENGT+KGTTWQVKFELDNVD+QATY+LRVALASASLAELQ
Subjt:  SDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDNVDNQATYKLRVALASASLAELQ

XP_038886212.1 probable rhamnogalacturonate lyase B isoform X1 [Benincasa hispida]

0.0e+00

92.09

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Query:  MPPRGVQLSITERQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNVLEVLNDESNRGYWDLVWSSSSSTTGLFDVIKATGFEVIVENEEQVELSFTRTWDLS
        MPP GVQL ITERQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNVLEVLNDESNRGYWDLVW+SS+STTGLFDVIK+TGFEVIVENE+QVELSFTR+WDLS
Subjt:  MPPRGVQLSITERQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNVLEVLNDESNRGYWDLVWSSSSSTTGLFDVIKATGFEVIVENEEQVELSFTRTWDLS

Query:  LEGKLVPLEIDKRFIMLRGSSGFYSYAIYQHPEEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRYMPLPDDRSPPRGRALAYPEAVLLVDPIEPEFQGE
        LEGKLVPLEIDKRFIMLRGSSGFYSYAIYQH +EWPGFNLGETRLAFKLRKDKFHYMAMADNRQRYMPLPDDRSPPRGRALAYPEAVLLVDPIEPE  GE
Subjt:  LEGKLVPLEIDKRFIMLRGSSGFYSYAIYQHPEEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRYMPLPDDRSPPRGRALAYPEAVLLVDPIEPEFQGE

Query:  VDDKYQYSCDNKDSGVHGWISTDPAVGFWLISPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSFDAL
        VDDKYQYSCDNKDSGVHGWISTDPAVGFWLI+PSNEFRSGGPVKQNLTSHVGPTTLAVFISAHY GEDLVPKIGA E WKKVFGPVFIYLNSTYDS DAL
Subjt:  VDDKYQYSCDNKDSGVHGWISTDPAVGFWLISPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSFDAL

Query:  QLWEDAKAQAVIEVQSWPYSFPASGDFPKSNQRGSINGRLLIKDSYVNEDLMPADGAFVGLAPPGDVGSWQRESKGYQFWSRADESGNFFIDGVRPGDYN
        QLWEDAKAQA IEVQSWPYSFPAS DFPK NQRGSI+GRLL++DSYV+ DL+PA+GAFVGLAPPGDVGSWQRESKGYQFWSRADESG F IDGVRP DYN
Subjt:  QLWEDAKAQAVIEVQSWPYSFPASGDFPKSNQRGSINGRLLIKDSYVNEDLMPADGAFVGLAPPGDVGSWQRESKGYQFWSRADESGNFFIDGVRPGDYN

Query:  LYAWVPGYIGDYRYDALINLTEGSEMDMGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSELYPDSDLVYTVGL
        L+AWVPG+IGDYRYDALI +TEG E+DM DITYEPPRQGAT+WEIGIPDRSAAEFYVP+PNPNYVNKLYLNHPDKFRQYGLWERYSELYPD+DLVYTVG+
Subjt:  LYAWVPGYIGDYRYDALINLTEGSEMDMGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSELYPDSDLVYTVGL

Query:  SDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDNVDNQATYKLRVALASASLAELQ
        SDYTKDWFFAQV RK ENGTYKGTTWQVKFELDNVDN+ATYKLR+ALASASLAELQ
Subjt:  SDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDNVDNQATYKLRVALASASLAELQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LPL0 Rhamnogalacturonan endolyase

0.0e+00

96.58

Show/hide

Query:  MPPRGVQLSITERQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNVLEVLNDESNRGYWDLVWSSSSSTTGLFDVIKATGFEVIVENEEQVELSFTRTWDLS
        MPP GVQL ITERQVTMDNGIVQVTLSNPDGIVTGIRY GVDNVLEVLNDESNRGYWDLVWSSSSSTTGLFDVIKATGFEVIVENEEQVELSFTRTWDLS
Subjt:  MPPRGVQLSITERQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNVLEVLNDESNRGYWDLVWSSSSSTTGLFDVIKATGFEVIVENEEQVELSFTRTWDLS

Query:  LEGKLVPLEIDKRFIMLRGSSGFYSYAIYQHPEEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRYMPLPDDRSPPRGRALAYPEAVLLVDPIEPEFQGE
        LEGKLVPLEIDKRFIMLRGSSGFYSYAIYQH EEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRYMPLPDDRSPPRGRALAYPEAVLLVDPIEPE QGE
Subjt:  LEGKLVPLEIDKRFIMLRGSSGFYSYAIYQHPEEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRYMPLPDDRSPPRGRALAYPEAVLLVDPIEPEFQGE

Query:  VDDKYQYSCDNKDSGVHGWISTDPAVGFWLISPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSFDAL
        VDDKYQYSCDNKDSGVHGWISTDPAVGFWLISPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSFDAL
Subjt:  VDDKYQYSCDNKDSGVHGWISTDPAVGFWLISPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSFDAL

Query:  QLWEDAKAQAVIEVQSWPYSFPASGDFPKSNQRGSINGRLLIKDSYVNEDLMPADGAFVGLAPPGDVGSWQRESKGYQFWSRADESGNFFIDGVRPGDYN
        QLWEDAKAQAVIEVQSWPYSFPAS DFP+SNQR SI+G+LL+KDSYVNEDL+PADGAFVGLAPPGDVGSWQRESKGYQFWSRADESGNF IDGVRPGDYN
Subjt:  QLWEDAKAQAVIEVQSWPYSFPASGDFPKSNQRGSINGRLLIKDSYVNEDLMPADGAFVGLAPPGDVGSWQRESKGYQFWSRADESGNFFIDGVRPGDYN

Query:  LYAWVPGYIGDYRYDALINLTEGSEMDMGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSELYPDSDLVYTVGL
        LYAWVPG+IGDYRYDALINLTEGSE+DMGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSEL+PDSDLVYTVG+
Subjt:  LYAWVPGYIGDYRYDALINLTEGSEMDMGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSELYPDSDLVYTVGL

Query:  SDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDNVDNQATYKLRVALASASLAELQ
        SDYTKDWFFAQVPRKMENGTYKGTTWQVKFELD+VDNQATYKLRVALAS SLAELQ
Subjt:  SDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDNVDNQATYKLRVALASASLAELQ

A0A1S3BCA7 Rhamnogalacturonan endolyase

0.0e+00

94.96

Show/hide

Query:  MPPRGVQLSITERQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNVLEVLNDESNRGYWDLVWSSSSSTTGLFDVIKATGFEVIVENEEQVELSFTRTWDLS
        MPP GVQL ITERQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNVLEVLNDE+NRGYWDLVWSSSSS+TGLFDVIKATGF+VIVENEEQVELSFTRTWDLS
Subjt:  MPPRGVQLSITERQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNVLEVLNDESNRGYWDLVWSSSSSTTGLFDVIKATGFEVIVENEEQVELSFTRTWDLS

Query:  LEGKLVPLEIDKRFIMLRGSSGFYSYAIYQHPEEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRYMPLPDDRSPPRGRALAYPEAVLLVDPIEPEFQGE
        LEGKLVPLEIDKRFIMLRGSSGFYSYAIYQH EEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRYMPLPDDRSPPRGRALAYPEAV L+DPIEPE QGE
Subjt:  LEGKLVPLEIDKRFIMLRGSSGFYSYAIYQHPEEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRYMPLPDDRSPPRGRALAYPEAVLLVDPIEPEFQGE

Query:  VDDKYQYSCDNKDSGVHGWISTDPAVGFWLISPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSFDAL
        VDDKYQYSCDNKDSGVHGWISTDP VGFWLISPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSFDAL
Subjt:  VDDKYQYSCDNKDSGVHGWISTDPAVGFWLISPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSFDAL

Query:  QLWEDAKAQAVIEVQSWPYSFPASGDFPKSNQRGSINGRLLIKDSYVNEDLMPADGAFVGLAPPGDVGSWQRESKGYQFWSRADESGNFFIDGVRPGDYN
        QLWEDAKAQA +EVQSWPYSFPAS DFP+SNQRGSI+G+LL+KDSYV+EDL+PA GAFVGLAPPGDVGSWQRESKGYQFWSRADESGNFFIDGVRPGDYN
Subjt:  QLWEDAKAQAVIEVQSWPYSFPASGDFPKSNQRGSINGRLLIKDSYVNEDLMPADGAFVGLAPPGDVGSWQRESKGYQFWSRADESGNFFIDGVRPGDYN

Query:  LYAWVPGYIGDYRYDALINLTEGSEMDMGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSELYPDSDLVYTVGL
        LYAWVPG+IGDYRYDALINL EGSE+DMGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNY+NKLYLNHPDKFRQYGLWERYSEL+PDSDLVY VG+
Subjt:  LYAWVPGYIGDYRYDALINLTEGSEMDMGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSELYPDSDLVYTVGL

Query:  SDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDNVDNQATYKLRVALASASLAELQ
        SDYTKDWFFAQVPRK+ENGTYKGTTWQVKFELDNVDNQATYKLRVALASASLAELQ
Subjt:  SDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDNVDNQATYKLRVALASASLAELQ

A0A5A7VI09 Rhamnogalacturonan endolyase

0.0e+00

94.78

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Query:  MPPRGVQLSITERQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNVLEVLNDESNRGYWDLVWSSSSSTTGLFDVIKATGFEVIVENEEQVELSFTRTWDLS
        MPP GVQL ITERQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNVLEVLNDE+NRGYWDLVWSSSSS+TGLFDVIKATGF+VIVENEEQVELSFTRTWDLS
Subjt:  MPPRGVQLSITERQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNVLEVLNDESNRGYWDLVWSSSSSTTGLFDVIKATGFEVIVENEEQVELSFTRTWDLS

Query:  LEGKLVPLEIDKRFIMLRGSSGFYSYAIYQHPEEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRYMPLPDDRSPPRGRALAYPEAVLLVDPIEPEFQGE
        LEGKLVPLEIDKRFIMLRGSSGFYSYAIYQH EEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRYMPLPDDRSPPRGRALAYPEAV L+DPIEPE QGE
Subjt:  LEGKLVPLEIDKRFIMLRGSSGFYSYAIYQHPEEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRYMPLPDDRSPPRGRALAYPEAVLLVDPIEPEFQGE

Query:  VDDKYQYSCDNKDSGVHGWISTDPAVGFWLISPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSFDAL
        VDDKYQYSCDNKDSGVHGWISTDP VGFWLISPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSFDAL
Subjt:  VDDKYQYSCDNKDSGVHGWISTDPAVGFWLISPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSFDAL

Query:  QLWEDAKAQAVIEVQSWPYSFPASGDFPKSNQRGSINGRLLIKDSYVNEDLMPADGAFVGLAPPGDVGSWQRESKGYQFWSRADESGNFFIDGVRPGDYN
        QLWEDAKAQA IEVQSWPYSFPAS DFP+SNQRGSI+G+LL+KDSYV+EDL+PA GAFVGLAPPGDVGSWQRESKGYQFWSRADESGNFFIDG RPGDYN
Subjt:  QLWEDAKAQAVIEVQSWPYSFPASGDFPKSNQRGSINGRLLIKDSYVNEDLMPADGAFVGLAPPGDVGSWQRESKGYQFWSRADESGNFFIDGVRPGDYN

Query:  LYAWVPGYIGDYRYDALINLTEGSEMDMGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSELYPDSDLVYTVGL
        LYAWVPG+IGDYRYDALINL EGSE+DMGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNY+NKLYLNHPDKFRQYGLWERYSEL+PDSDLVY VG+
Subjt:  LYAWVPGYIGDYRYDALINLTEGSEMDMGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSELYPDSDLVYTVGL

Query:  SDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDNVDNQATYKLRVALASASLAELQ
        SDYTKDWFFAQVPR +ENGTYKGTTWQVKFELDNVDNQATYKLRVALASASLAELQ
Subjt:  SDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDNVDNQATYKLRVALASASLAELQ

A0A6J1BSU2 Rhamnogalacturonan endolyase

2.0e-303

88.13

Show/hide

Query:  MPPRGVQLSITERQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNVLEVLNDESNRGYWDLVWSSSSSTTGLFDVIKATGFEVIVENEEQVELSFTRTWDLS
        MPP GVQL +TERQV MDNGIVQVT SNPDGIV GIRYNGVDN+LE+LNDE NRGYWDLVWS S+STTG FDVIKAT FEVIVENE+QVELSFTR WDLS
Subjt:  MPPRGVQLSITERQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNVLEVLNDESNRGYWDLVWSSSSSTTGLFDVIKATGFEVIVENEEQVELSFTRTWDLS

Query:  LEGKLVPLEIDKRFIMLRGSSGFYSYAIYQHPEEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRYMPLPDDRSPPRGRALAYPEAVLLVDPIEPEFQGE
        LEGKLVPLEIDKRF+MLRGSSGFYSYAIYQH +EWPGFNLGETRLAFKLRKDKFHYMAMADNRQR MPLPDDRSPPRGRALAYPEAVLLVDP+EPE QGE
Subjt:  LEGKLVPLEIDKRFIMLRGSSGFYSYAIYQHPEEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRYMPLPDDRSPPRGRALAYPEAVLLVDPIEPEFQGE

Query:  VDDKYQYSCDNKDSGVHGWISTDPAVGFWLISPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSFDAL
        VDDKYQYSCDNKDS VHGWISTDP VGFWLI+PSNEFRSGGPVKQNLTSHVGPTTLAVFISAHY GEDLVPKIGAGEAWKKVFGPVFIYLNSTYDS DA+
Subjt:  VDDKYQYSCDNKDSGVHGWISTDPAVGFWLISPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSFDAL

Query:  QLWEDAKAQAVIEVQSWPYSFPASGDFPKSNQRGSINGRLLIKDSYVNEDLMPADGAFVGLAPPGDVGSWQRESKGYQFWSRADESGNFFIDGVRPGDYN
        QLWEDAKAQ  IEVQSWPYSFPAS DFPKSNQRG+I GRLL+KD YV+ED +PA+GAFVGLAPPGDVGSWQRESKGYQFWSRADESG F I+GVR GDYN
Subjt:  QLWEDAKAQAVIEVQSWPYSFPASGDFPKSNQRGSINGRLLIKDSYVNEDLMPADGAFVGLAPPGDVGSWQRESKGYQFWSRADESGNFFIDGVRPGDYN

Query:  LYAWVPGYIGDYRYDALINLTEGSEMDMGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSELYPDSDLVYTVGL
        LYAWVPG+IGDYR D+LIN++EGSE+D+GDI YE PR+GAT+WEIGIPDRSAAEFYVPDPNP YVNKLYLNHPDKFRQYGLWERY+ELYPD+DLVYT+G+
Subjt:  LYAWVPGYIGDYRYDALINLTEGSEMDMGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSELYPDSDLVYTVGL

Query:  SDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDNVDNQATYKLRVALASASLAELQ
        SDYTKDWFFAQV RK ENGT+KGTTWQVKF+LDNVD + TYKLR+ALASASLAELQ
Subjt:  SDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDNVDNQATYKLRVALASASLAELQ

A0A6J1KMB3 Rhamnogalacturonan endolyase

4.8e-305

89.03

Show/hide

Query:  MPPRGVQLSITERQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNVLEVLNDESNRGYWDLVWSSSSSTTGLFDVIKATGFEVIVENEEQVELSFTRTWDLS
        MPP GVQLSI+E QVTMDNGIVQVTLSNPDGIVTGIRYNGVDN+LEVLNDESNRGYWDLVW+ S+S TG FDVIKAT FEVIVENE+QVELSFTR WDLS
Subjt:  MPPRGVQLSITERQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNVLEVLNDESNRGYWDLVWSSSSSTTGLFDVIKATGFEVIVENEEQVELSFTRTWDLS

Query:  LEGKLVPLEIDKRFIMLRGSSGFYSYAIYQHPEEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRYMPLPDDRSPPRGRALAYPEAVLLVDPIEPEFQGE
        LEGKLVPLEIDKRFIMLRGSSGFYSYAIYQH +EWPGFNLGETRLAFKLRKDKFHYMAMADNRQR MPLPDDRSPPRGRALAYPEAVLLVDPIE E QGE
Subjt:  LEGKLVPLEIDKRFIMLRGSSGFYSYAIYQHPEEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRYMPLPDDRSPPRGRALAYPEAVLLVDPIEPEFQGE

Query:  VDDKYQYSCDNKDSGVHGWISTDPAVGFWLISPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSFDAL
        VDDKYQYSCDNKDSGVHGWISTDP +GFWLI+PSNE RSGGPVKQNLTSHVGPT+LAVFISAHY GEDLVPKIGAGEAWKKVFGPVFIYLNSTYD  DA 
Subjt:  VDDKYQYSCDNKDSGVHGWISTDPAVGFWLISPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSFDAL

Query:  QLWEDAKAQAVIEVQSWPYSFPASGDFPKSNQRGSINGRLLIKDSYVNEDLMPADGAFVGLAPPGDVGSWQRESKGYQFWSRADESGNFFIDGVRPGDYN
        QLWED K+QA IEVQSWPYSFPAS DFPKSNQRG+I+GRLL+KDSYV+ED +PA+GAFVGLAPPGDVGSWQRESKGYQFWSRADE G FFID VRPGDYN
Subjt:  QLWEDAKAQAVIEVQSWPYSFPASGDFPKSNQRGSINGRLLIKDSYVNEDLMPADGAFVGLAPPGDVGSWQRESKGYQFWSRADESGNFFIDGVRPGDYN

Query:  LYAWVPGYIGDYRYDALINLTEGSEMDMGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSELYPDSDLVYTVGL
        LYAWVPG+IGDYRYD++IN+ EGS++D+ +I YEPPR GATLWEIG+PDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSELYPD+DLVYTVG+
Subjt:  LYAWVPGYIGDYRYDALINLTEGSEMDMGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSELYPDSDLVYTVGL

Query:  SDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDNVDNQATYKLRVALASASLAELQ
        SDYTKDWFFAQV RK ENGT+KGTTWQVKFELDNVD+QATYKLRVALASAS+ ELQ
Subjt:  SDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDNVDNQATYKLRVALASASLAELQ

SwissProt top hits

e value

%identity

Alignment

A5ABH4 Probable rhamnogalacturonate lyase B

1.0e-22

25.11

Show/hide

Query:  GSSGFYSYAIYQHPEEWPGF--NLGETRLAFKLRKDKFHYMAMADNRQRYMPLPDDRSPPRGRALAYPEAVLLVDPIEPEFQGEVD--DKYQYSCDNKDS
        G +G ++++   +  E   +  NL E R  F+   + + +++ ++   +  PLP  ++      +          P +  +    D   KY +S   +D+
Subjt:  GSSGFYSYAIYQHPEEWPGF--NLGETRLAFKLRKDKFHYMAMADNRQRYMPLPDDRSPPRGRALAYPEAVLLVDPIEPEFQGEVD--DKYQYSCDNKDS

Query:  GVHGW-----ISTDPAVGFWLISPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSFDALQ-LWEDAKA
         VHG       S     G WL+  + +   GGP+  +LT  V        +S H+ GE   P I  G  + + FGP + + N    S  +LQ L  DA+ 
Subjt:  GVHGW-----ISTDPAVGFWLISPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSFDALQ-LWEDAKA

Query:  QAVIEVQSWPYSFPAS-----GDFPKSNQRGSINGRL-LIKDSYVNEDLMPADGAFVGLAPPGDVGSWQRESKGYQFWSRADESGNFFIDGVRPGDYNLY
         A     SW   F  S       +  S+QRGS+ G++ L K +     ++  DG +               S  YQ+W+  D+SG+F +D V+ G Y L 
Subjt:  QAVIEVQSWPYSFPAS-----GDFPKSNQRGSINGRL-LIKDSYVNEDLMPADGAFVGLAPPGDVGSWQRESKGYQFWSRADESGNFFIDGVRPGDYNLY

Query:  AWVPGYIGDYRYDALINLTEGSEMDMGDITYEPPRQGATLWEIGIPDRSAAEF---YVPDPNPNYVNKLYLNHPDKFRQYGLWERYSELYPDSDLVYTVG
         +  G  GD+  D  + +  G +  + + T+E    G  +W +G PD+S+ EF      DP         L+ P+    +G ++  S+ +PD  + YT+G
Subjt:  AWVPGYIGDYRYDALINLTEGSEMDMGDITYEPPRQGATLWEIGIPDRSAAEF---YVPDPNPNYVNKLYLNHPDKFRQYGLWERYSELYPDSDLVYTVG

Query:  LSDYTKD-----W-FFAQVPRKMENGTYKGTTWQVKFEL--DNVDNQATYKLRVALASASLA
         SD   D     W  F   P            W + F L  D++  ++   L + LA A  A
Subjt:  LSDYTKD-----W-FFAQVPRKMENGTYKGTTWQVKFEL--DNVDNQATYKLRVALASASLA

Q2U5P7 Probable rhamnogalacturonate lyase C

1.0e-14

23.67

Show/hide

Query:  RFIMLRG-SSGFYSYA-IYQHPEEWPGF-NLGETRLAFKLRKDKFHYMAMADNRQRYMPLPDDRSPPRGRALAYPEAVLLVDPIEPEFQGEVDDKYQYSC
        ++  LRG  +G ++++ +    E  P   +LGE R  F+   D + + + +D      PL  +       A  Y   V   DP   ++  +   KY  + 
Subjt:  RFIMLRG-SSGFYSYA-IYQHPEEWPGF-NLGETRLAFKLRKDKFHYMAMADNRQRYMPLPDDRSPPRGRALAYPEAVLLVDPIEPEFQGEVDDKYQYSC

Query:  DNKDSGVHGWISTDPA------VGFWLISPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSFDALQLW
          ++  VHG  S   +       G WL+  + E   GGP+  +L   V        +S H+      P       + + +GP F Y N          L 
Subjt:  DNKDSGVHGWISTDPA------VGFWLISPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSFDALQLW

Query:  EDAKAQAVIEVQSWPYSFPAS--GDFPKSNQRGSINGRLLIKDSYVNEDLMPADGAFVGLAPPG-DVGSWQRESKGYQFWSRADESGNFFIDGVRPGDYN
         DA   A  E  +  Y   A    +F  S  R +  G++ +           A    + L+  G D       ++  Q+W+  D+SG+F I  V  G Y 
Subjt:  EDAKAQAVIEVQSWPYSFPAS--GDFPKSNQRGSINGRLLIKDSYVNEDLMPADGAFVGLAPPG-DVGSWQRESKGYQFWSRADESGNFFIDGVRPGDYN

Query:  LYAWVPGYIGDYRYDALINLTEGSEMDMGDITYEPPRQGATLWEIGIPDRSAAEF---YVPDPNPNYVNKLYLNHPDKFRQYGLWERYSELYP---DSDL
        +  +     G +  D  + + +    D    T++    G  +W IGIPD+S+ E+   Y PD +           P++ R Y  W +Y   YP      +
Subjt:  LYAWVPGYIGDYRYDALINLTEGSEMDMGDITYEPPRQGATLWEIGIPDRSAAEF---YVPDPNPNYVNKLYLNHPDKFRQYGLWERYSELYP---DSDL

Query:  VYTVGLSDYTKD-----W-FFAQVPRKMENGTY--KGTTWQVKFEL--DNVDNQATYKLRVALASASLA
         + VG SD ++D     W FF      +    Y      W V F+L  D + N  T    V +A A  A
Subjt:  VYTVGLSDYTKD-----W-FFAQVPRKMENGTY--KGTTWQVKFEL--DNVDNQATYKLRVALASASLA

Arabidopsis top hits

e value

%identity

Alignment

AT1G09880.1 Rhamnogalacturonate lyase family protein

3.7e-217

62.89

Show/hide

Query:  MDNGIVQVTLSNPDGIVTGIRYNGVDNVLE-VLNDESNRGYWDLVWS----SSSSTTGLFDVIKATGFEVIVENEEQVELSFTRTWDLSLEGKLVPLEID
        M+N  +Q+TLSNP+G VTGI+YNG+DNVL    N E +RGYWD+VW+     +  T G  D I+AT  EVI +N+E++ELSFTRTW+ S     VP+ ID
Subjt:  MDNGIVQVTLSNPDGIVTGIRYNGVDNVLE-VLNDESNRGYWDLVWS----SSSSTTGLFDVIKATGFEVIVENEEQVELSFTRTWDLSLEGKLVPLEID

Query:  KRFIMLRGSSGFYSYAIYQHPEEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRYMPLPDDRSPPRGRALAYPEAVLLVDPIEPEFQGEVDDKYQYSCDN
        KRF+ML+ SSGFYSYAI++  + WP   L   RL FKL K KFHYMA++D+RQRYMP+PDDR PPRG+ LAYPEAV L+DPIEPEF+GEVDDKY+YS ++
Subjt:  KRFIMLRGSSGFYSYAIYQHPEEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRYMPLPDDRSPPRGRALAYPEAVLLVDPIEPEFQGEVDDKYQYSCDN

Query:  KDSGVHGWISTDPAVGFWLISPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSFDALQLWEDAKAQAV
        KD  VHGWIST+ +VGFW I+PSNEFRS GP+KQ L SHVGPT LAVF S HY G DL+     GEAWKKVFGPVFIYLNS     D L LW +AK Q  
Subjt:  KDSGVHGWISTDPAVGFWLISPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSFDALQLWEDAKAQAV

Query:  IEVQSWPYSFPASGDFPKSNQRGSINGRLLIKDSYVNEDLMPADGAFVGLAPPGDVGSWQRESKGYQFWSRADESGNFFIDGVRPGDYNLYAWVPGYIGD
        IE + WPY+F AS DFP S+QRGS++GRLL++D +++ + +PA+G++VGLA PGDVGSWQRE KGYQFWS+ADE+G+F I+ VR G YNLYA+ PG+IGD
Subjt:  IEVQSWPYSFPASGDFPKSNQRGSINGRLLIKDSYVNEDLMPADGAFVGLAPPGDVGSWQRESKGYQFWSRADESGNFFIDGVRPGDYNLYAWVPGYIGD

Query:  YRYDALINLTEGSEMDMGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSELYPDSDLVYTVGLSDYTKDWFFAQ
        Y  D + +++ GS++ +GD+ YEPPR G+TLWEIG+PDRSAAEFY+PDPNP++VNKLYLNH DK+RQYGLWERYSELYPD D+VY V + DY+K+WFF Q
Subjt:  YRYDALINLTEGSEMDMGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSELYPDSDLVYTVGLSDYTKDWFFAQ

Query:  VPRKMENGTYKGTTWQVKFELDNVDNQAT--YKLRVALASASLAELQ
        V RK  NG YKGTTWQ++F+ D+     T  +KLR+ALA++++AELQ
Subjt:  VPRKMENGTYKGTTWQVKFELDNVDNQAT--YKLRVALASASLAELQ

AT1G09890.1 Rhamnogalacturonate lyase family protein

1.2e-244

70.85

Show/hide

Query:  MDNGIVQVTLSNPDGIVTGIRYNGVDNVLEVLNDESNRGYWDLVWSSSSSTTGLFDVIKATGFEVIVENEEQVELSFTRTWDLSLEGKLVPLEIDKRFIM
        MDNGI +VTLS PDGIVTGI YNG+DN+LEVLN+E NRGYWDLVW   S T G FDVIK + FEVIV+NEEQ+ELSFTR WD S EGK VPL IDKRF+M
Subjt:  MDNGIVQVTLSNPDGIVTGIRYNGVDNVLEVLNDESNRGYWDLVWSSSSSTTGLFDVIKATGFEVIVENEEQVELSFTRTWDLSLEGKLVPLEIDKRFIM

Query:  LRGSSGFYSYAIYQHPEEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRYMPLPDDRSPPRGRALAYPEAVLLVDPIEPEFQGEVDDKYQYSCDNKDSGV
        L GSSGFY+YAIY+H +EWP F+L ETR+AFKLRK+KFHYMA+ D+RQR+MPLPDDR P RG+ALAYPEAVLLV+P+E +F+GEVDDKYQYSC+NKD  V
Subjt:  LRGSSGFYSYAIYQHPEEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRYMPLPDDRSPPRGRALAYPEAVLLVDPIEPEFQGEVDDKYQYSCDNKDSGV

Query:  HGWISTD-PAVGFWLISPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEAWKKVFGPVFIYLN-STYDSFDALQLWEDAKAQAVIEV
        HGWI T+ P+VGFWLI+PS+E+R+GGP KQNLTSHVGPT LAVFISAHY GEDLVPK   GEAWKKVFGPVF+YLN ST D  D L LW+DAK+Q  +E 
Subjt:  HGWISTD-PAVGFWLISPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEAWKKVFGPVFIYLN-STYDSFDALQLWEDAKAQAVIEV

Query:  QSWPYSFPASGDFPKSNQRGSINGRLLIKDSYVNEDLMPADGAFVGLAPPGDVGSWQRESKGYQFWSRADESGNFFIDGVRPGDYNLYAWVPGYIGDYRY
        +SWPYSFPAS D+ K+ QRG++ GRLL++D YV++D + A+  +VGLA PG  GSWQRE K YQFW+R DE G F+I G+RPG YNLYAW+PG+IGDY+Y
Subjt:  QSWPYSFPASGDFPKSNQRGSINGRLLIKDSYVNEDLMPADGAFVGLAPPGDVGSWQRESKGYQFWSRADESGNFFIDGVRPGDYNLYAWVPGYIGDYRY

Query:  DALINLTEGSEMDMGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSELYPDSDLVYTVGLSDYTKDWFFAQVPR
        D +I +T G  + + D+ Y+PPR GATLWEIG PDRSAAEFYVPDPNP Y+N LY NHPD+FRQYGLWERY+ELYPD DLVY VG SDY KDWF+AQV R
Subjt:  DALINLTEGSEMDMGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSELYPDSDLVYTVGLSDYTKDWFFAQVPR

Query:  KMENGTYKGTTWQVKFELDNVDNQATYKLRVALASASLAELQ
        K +N TY+GTTWQ+KFEL N+D   +Y LRVA+ASA+ +ELQ
Subjt:  KMENGTYKGTTWQVKFELDNVDNQATYKLRVALASASLAELQ

AT1G09910.1 Rhamnogalacturonate lyase family protein

5.9e-231

65.65

Show/hide

Query:  MPPRGVQLSITERQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNVLEVLNDESNRGYWDLVWSSSSSTTGLFDVIKATGFEVIVENEEQVELSFTRTWDLS
        M   GV L + +R V MDNGI+QVTLS P GI+TGI YNG+DNVLEV N E+NRGYWDL W+      G+FDVI    F VIVE EEQVE+SF RTWD S
Subjt:  MPPRGVQLSITERQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNVLEVLNDESNRGYWDLVWSSSSSTTGLFDVIKATGFEVIVENEEQVELSFTRTWDLS

Query:  LEGKLVPLEIDKRFIMLRGSSGFYSYAIYQHPEEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRYMPLPDDRSPPRGRALAYPEAVLLVDPIEPEFQGE
        LEGK +PL IDKRFIMLRGSSG YSY IY+H ++WPGF LGETR+AFKLRKDKFHYMA+AD+R+R MP PDD    R + L Y EA LL  P +P  QGE
Subjt:  LEGKLVPLEIDKRFIMLRGSSGFYSYAIYQHPEEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRYMPLPDDRSPPRGRALAYPEAVLLVDPIEPEFQGE

Query:  VDDKYQYSCDNKDSGVHGWISTDPAVGFWLISPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSFDAL
        VDDKYQYSC+NKD  VHGWIS DP VGFW I+PSNEFRSGGP+KQNLTSHVGPTTLAVF S HYAG+ ++P+   GE WKKV+GPVFIYLNST +  D L
Subjt:  VDDKYQYSCDNKDSGVHGWISTDPAVGFWLISPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSFDAL

Query:  QLWEDAKAQAVIEVQSWPYSFPASGDFPKSNQRGSINGRLLIKDSYVNEDLMPADGAFVGLAPPGDVGSWQRESKGYQFWSRADESGNFFIDGVRPGDYN
         LW+DAK + + EV+ WPYSF AS D+PKS +RG+  GRLLI+D ++N DL+ A GA+VGLAPPGD GSWQ E KGYQFW+ ADE+G F I  VRPG+YN
Subjt:  QLWEDAKAQAVIEVQSWPYSFPASGDFPKSNQRGSINGRLLIKDSYVNEDLMPADGAFVGLAPPGDVGSWQRESKGYQFWSRADESGNFFIDGVRPGDYN

Query:  LYAWVPGYIGDYRYDALINLTEGSEMDMGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSELYPDSDLVYTVGL
        LYAWVP +IGDY    ++ +T G  ++MGDI YEPPR G TLWEIGIPDR A+EF++PDP+P  VN++ ++H D+FRQYGLW++Y+++YP+ DLVYTVG+
Subjt:  LYAWVPGYIGDYRYDALINLTEGSEMDMGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSELYPDSDLVYTVGL

Query:  SDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDNVDNQATYKLRVALASASLAELQ
        SDY +DWFFA VPRK +   ++GTTWQ+ F L+N+D +A YKLRVA+ASA+LAELQ
Subjt:  SDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDNVDNQATYKLRVALASASLAELQ

AT2G22620.1 Rhamnogalacturonate lyase family protein

4.5e-191

55.73

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Query:  MPPRGVQL-SITERQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNVLEVLNDESNRGYWDLVWSSSSSTTGLFDVIKATGFEVIVENEEQVELSFTRTWDL
        +P   VQL  +    V +DNGIVQVT SNP+G++TGI+Y+G+DNVL+   D+  RGYWD+VW          D ++ T FE+I +NEEQ+E+SFTRTW +
Subjt:  MPPRGVQL-SITERQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNVLEVLNDESNRGYWDLVWSSSSSTTGLFDVIKATGFEVIVENEEQVELSFTRTWDL

Query:  SLEGKLVPLEIDKRFIMLRGSSGFYSYAIYQHPEEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRYMPLPDDRSPPRGRALAYPEAVLLVDPIEPEFQG
        S  G LVPL +DKR+I+  G SG Y Y I +  E WP  ++ + R+ FKL   KF +MA++D+RQR MP   DR     ++LAY EAVLL +P  P F+G
Subjt:  SLEGKLVPLEIDKRFIMLRGSSGFYSYAIYQHPEEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRYMPLPDDRSPPRGRALAYPEAVLLVDPIEPEFQG

Query:  EVDDKYQYSCDNKDSGVHGWISTDPAVGFWLISPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSFDA
        EVDDKY YS ++KD+ VHGWIS+DP VGFW+I+PS+EFR GGP+KQ+LTSH GP TL++F S HYAG+++      GE WKKVFGPV  YLNS       
Subjt:  EVDDKYQYSCDNKDSGVHGWISTDPAVGFWLISPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSFDA

Query:  LQLWEDAKAQAVIEVQSWPYSFPASGDFPKSNQRGSINGRLLIKDSYVNEDLMPADGAFVGLAPPGDVGSWQRESKGYQFWSRADESGNFFIDGVRPGDY
        L+LW DAK Q   EV+SWPY F  S D+P  +QRG++ G+ LIKDSYV+   +    AFVGLAP G+ GSWQ ESKGYQFW++AD  G F I+ VR G+Y
Subjt:  LQLWEDAKAQAVIEVQSWPYSFPASGDFPKSNQRGSINGRLLIKDSYVNEDLMPADGAFVGLAPPGDVGSWQRESKGYQFWSRADESGNFFIDGVRPGDY

Query:  NLYAWVPGYIGDYRYDALINLTEGSEMDMGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNH-PDKFRQYGLWERYSELYPDSDLVYTV
        +LYAW  G+IGDY+Y+  I +T GSEM++G + YEPPR G TLWEIG+PDR+A EFY+PDP P  +NKLY+N   D+FRQYGLW+RY++LYP +DLVYT+
Subjt:  NLYAWVPGYIGDYRYDALINLTEGSEMDMGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNH-PDKFRQYGLWERYSELYPDSDLVYTV

Query:  GLSDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDNVDNQATYKLRVALASASLAELQ
        G+SDY  DWFFA V R + N TY+ TTWQ+ F L NV+    Y LR+ALASA+ +ELQ
Subjt:  GLSDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDNVDNQATYKLRVALASASLAELQ

AT4G24430.1 Rhamnogalacturonate lyase family protein

7.9e-228

65.16

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Query:  VQLSITERQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNVLEVLNDESNRGYWDLVWSSSSS--TTGLFDVIKATGFEVIVENEEQVELSFTRTWDLSLEG
        VQL + E  V M NG V+VT+S PDG VTGI Y GVDN+LE  N++ NRGYWDLVWS   +  TTG  + IK T FEV+VENEE VE+SF+R WD SL+ 
Subjt:  VQLSITERQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNVLEVLNDESNRGYWDLVWSSSSS--TTGLFDVIKATGFEVIVENEEQVELSFTRTWDLSLEG

Query:  KLVPLEIDKRFIMLRGSSGFYSYAIYQHPEEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRYMPLPDDRSPPRGRALAYPEAVLLVDPIEPEFQGEVDD
         + P+ +DKRFIM +  +GFYSYAI++H  EWP FNL +TR+ +KLRKDKF YMA+ADNRQR MPLP+DR   RGR LAYPEAVLLV P+E EF+GEVDD
Subjt:  KLVPLEIDKRFIMLRGSSGFYSYAIYQHPEEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRYMPLPDDRSPPRGRALAYPEAVLLVDPIEPEFQGEVDD

Query:  KYQYSCDNKDSGVHGWISTDPAVGFWLISPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEAWKKVFGPVFIYLNSTYD-SFDALQL
        KY+YS +NKD  VHGWIS +  +G W I PSNEFRSGG  KQNLTSHVGP +LA+F+SAHYAGED+V K+ AG++WKKVFGPVF YLN   D + D L L
Subjt:  KYQYSCDNKDSGVHGWISTDPAVGFWLISPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEAWKKVFGPVFIYLNSTYD-SFDALQL

Query:  WEDAKAQAVIEVQSWPYSFPASGDFPKSNQRGSINGRLLIKDSYVNEDLMPADGAFVGLAPPGDVGSWQRESKGYQFWSRADESGNFFIDGVRPGDYNLY
        W+DAK Q + EVQSWPY FPAS DFP S++RG I+GRLL+ D ++++D +PA+GAFVGLAPPG+VGSWQ ESKGYQFW+ AD  G F I+ +R G+YNL 
Subjt:  WEDAKAQAVIEVQSWPYSFPASGDFPKSNQRGSINGRLLIKDSYVNEDLMPADGAFVGLAPPGDVGSWQRESKGYQFWSRADESGNFFIDGVRPGDYNLY

Query:  AWVPGYIGDYRYDALINLTEGSEMDMGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSELYPDSDLVYTVGLSD
         +V G+IGDY+Y+ LIN+T G ++D+G+I YEPPR G T+WEIGIPDRSAAEF+VPDPNP Y+NKLY+ HPD+FRQYGLWERY+ELYP  DLV+T+G+SD
Subjt:  AWVPGYIGDYRYDALINLTEGSEMDMGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSELYPDSDLVYTVGLSD

Query:  YTKDWFFAQVPRKMENGTYKGTTWQVKFELDNVDNQATYKLRVALASASLAELQ
        Y KDWFFA V RKM + TY+ TTWQ+KF+L+NV    TYK+R+ALA+A++AELQ
Subjt:  YTKDWFFAQVPRKMENGTYKGTTWQVKFELDNVDNQATYKLRVALASASLAELQ

Sequences

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CDS sequence

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ATGCCGCCACGGGGTGTGCAGCTCTCTATTACAGAACGTCAGGTGACAATGGATAATGGCATAGTCCAAGTCACGTTATCAAACCCAGATGGTATAGTAACTGGAATTCG
ATACAATGGAGTTGACAACGTGCTTGAAGTCCTAAACGATGAATCTAACCGAGGGTACTGGGACCTCGTGTGGAGCTCATCATCGTCCACAACTGGATTGTTTGATGTGA
TAAAGGCTACAGGTTTCGAGGTCATAGTGGAAAATGAAGAACAAGTGGAGCTCTCCTTTACAAGAACATGGGATCTGTCTCTCGAGGGAAAGCTTGTGCCTTTAGAGATT
GATAAAAGGTTTATAATGCTCCGGGGTTCGTCTGGGTTCTACTCTTACGCTATTTACCAACACCCGGAAGAATGGCCCGGTTTCAACCTTGGTGAAACTAGACTCGCCTT
CAAACTCAGAAAAGACAAGTTCCACTATATGGCCATGGCAGACAACAGACAGAGGTACATGCCGCTTCCAGATGACCGTTCTCCGCCGAGAGGTCGAGCCCTGGCATATC
CAGAGGCCGTCCTGCTCGTCGACCCTATCGAACCTGAGTTCCAGGGAGAGGTGGATGACAAGTATCAGTACTCATGCGACAACAAAGACAGCGGCGTCCATGGATGGATA
TCCACCGATCCGGCAGTCGGATTCTGGCTAATCTCGCCCAGCAATGAGTTCCGGTCCGGTGGACCCGTTAAACAGAACCTAACTTCACACGTCGGCCCAACCACCCTAGC
TGTTTTTATAAGCGCACATTACGCGGGTGAGGATCTGGTGCCGAAAATCGGAGCCGGCGAGGCGTGGAAGAAAGTTTTCGGTCCTGTGTTCATCTATCTCAACTCCACTT
ATGATTCCTTCGACGCACTTCAGCTCTGGGAAGATGCCAAAGCACAGGCAGTAATCGAAGTCCAAAGTTGGCCCTACAGCTTCCCTGCTTCGGGCGATTTTCCAAAGTCA
AATCAACGTGGTAGTATCAATGGTAGACTATTAATCAAAGATAGCTACGTCAATGAAGACTTGATGCCGGCAGACGGTGCGTTTGTTGGCCTGGCTCCACCAGGGGACGT
AGGATCATGGCAACGAGAGAGCAAGGGTTATCAATTTTGGAGCAGAGCAGATGAAAGTGGAAATTTTTTCATCGATGGCGTGAGGCCGGGCGACTACAATCTGTATGCAT
GGGTCCCCGGTTATATAGGAGATTATCGTTATGATGCTCTCATCAACCTTACAGAAGGCAGTGAGATGGACATGGGAGACATAACATATGAACCTCCGAGACAAGGGGCC
ACACTATGGGAAATAGGAATCCCAGATCGCTCCGCAGCAGAGTTCTATGTTCCAGATCCAAATCCCAACTACGTCAATAAGCTCTACCTTAACCATCCTGATAAGTTTCG
GCAGTATGGCCTATGGGAAAGATACAGTGAATTGTATCCCGACTCAGATTTGGTATATACCGTTGGCCTTAGTGACTACACCAAGGATTGGTTCTTTGCTCAGGTCCCCA
GGAAGATGGAAAATGGAACATACAAGGGAACGACATGGCAAGTGAAGTTCGAGCTAGACAATGTGGACAACCAAGCAACTTACAAGCTTCGGGTTGCATTGGCCTCCGCT
TCTCTCGCAGAATTGCAGTTTGACTCTCAACGACTTTAA

mRNA sequence

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Protein sequence

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MPPRGVQLSITERQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNVLEVLNDESNRGYWDLVWSSSSSTTGLFDVIKATGFEVIVENEEQVELSFTRTWDLSLEGKLVPLEI
DKRFIMLRGSSGFYSYAIYQHPEEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRYMPLPDDRSPPRGRALAYPEAVLLVDPIEPEFQGEVDDKYQYSCDNKDSGVHGWI
STDPAVGFWLISPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSFDALQLWEDAKAQAVIEVQSWPYSFPASGDFPKS
NQRGSINGRLLIKDSYVNEDLMPADGAFVGLAPPGDVGSWQRESKGYQFWSRADESGNFFIDGVRPGDYNLYAWVPGYIGDYRYDALINLTEGSEMDMGDITYEPPRQGA
TLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSELYPDSDLVYTVGLSDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDNVDNQATYKLRVALASA
SLAELQFDSQRL

PI0013022 (gene) of Melon (PI 482460) v1 genome