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PI0013024 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013024
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr06:18696964..18697810
RNA-Seq ExpressionPI0013024
SyntenyPI0013024
Gene Ontology termsGO:0001510 - RNA methylation (biological process)
GO:0034470 - ncRNA processing (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038163.1 retrotransposon protein [Cucumis melo var. makuwa]7.0e-1953.27Show/hide
Query:  CGVCGLVGHPN-----DKCPDLIEDVNVI-RKDRATGGRCKISLDIGLQVTTKYMEEGDMDINIKDFDIPNPHGLEPTSGKDMPSTPTSRAHGAKSSKPN
        C + GL  HPN     +K      D+ ++  +DRATGGRCK  +++GLQ TT+  E+ DMDIN++DFDIPNPHGLEP SG+DM STPTS  H A+SS+ +
Subjt:  CGVCGLVGHPN-----DKCPDLIEDVNVI-RKDRATGGRCKISLDIGLQVTTKYMEEGDMDINIKDFDIPNPHGLEPTSGKDMPSTPTSRAHGAKSSKPN

Query:  QKRQAYS
        +KR++YS
Subjt:  QKRQAYS
KAA0067273.1 retrotransposon protein [Cucumis melo var. makuwa]1.1e-1956Show/hide
Query:  GHPN-----DKCPDLIEDVNVI-RKDRATGGRCKISLDIGLQVTTKYMEEGDMDINIKDFDIPNPHGLEPTSGKDMPSTPTSRAHGAKSSKPNQKRQAYS
        GHPN     +K      D+ ++  +DRATGGRCK  +++GLQ+  +  EE DMDIN++DFDIPNPHGLEP SG+DM STPTS AH   SSKP++KR++YS
Subjt:  GHPN-----DKCPDLIEDVNVI-RKDRATGGRCKISLDIGLQVTTKYMEEGDMDINIKDFDIPNPHGLEPTSGKDMPSTPTSRAHGAKSSKPNQKRQAYS
TYK07921.1 hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa]4.1e-1956Show/hide
Query:  GHPN-----DKCPDLIEDVNVI-RKDRATGGRCKISLDIGLQVTTKYMEEGDMDINIKDFDIPNPHGLEPTSGKDMPSTPTSRAHGAKSSKPNQKRQAYS
        GHPN     +K      D+ V+  +DRATGGRCK  +++  Q T +  EE DMDIN++DFDIPNPHGLEP SG+DMPSTPTS  H A SS+P++KR++YS
Subjt:  GHPN-----DKCPDLIEDVNVI-RKDRATGGRCKISLDIGLQVTTKYMEEGDMDINIKDFDIPNPHGLEPTSGKDMPSTPTSRAHGAKSSKPNQKRQAYS
TYK10886.1 retrotransposon protein [Cucumis melo var. makuwa]1.6e-1854Show/hide
Query:  GHPN-----DKCPDLIEDVNVI-RKDRATGGRCKISLDIGLQVTTKYMEEGDMDINIKDFDIPNPHGLEPTSGKDMPSTPTSRAHGAKSSKPNQKRQAYS
        GHPN     +K      D+ ++  +DRATGGRCK  +++GLQ+  +  EE DMDIN++DFDIPNPHGLEP SG+DM STPTS A+   SS+P++KR++YS
Subjt:  GHPN-----DKCPDLIEDVNVI-RKDRATGGRCKISLDIGLQVTTKYMEEGDMDINIKDFDIPNPHGLEPTSGKDMPSTPTSRAHGAKSSKPNQKRQAYS
XP_008460440.1 PREDICTED: uncharacterized protein LOC103499248 [Cucumis melo]1.1e-1956Show/hide
Query:  GHPN-----DKCPDLIEDVNVI-RKDRATGGRCKISLDIGLQVTTKYMEEGDMDINIKDFDIPNPHGLEPTSGKDMPSTPTSRAHGAKSSKPNQKRQAYS
        GHPN     +K      D+ ++  +DRATGGRCK  +++GLQ+  +  EE DMDIN++DFDIPNPHGLEP SG+DM STPTS AH   SSKP++KR++YS
Subjt:  GHPN-----DKCPDLIEDVNVI-RKDRATGGRCKISLDIGLQVTTKYMEEGDMDINIKDFDIPNPHGLEPTSGKDMPSTPTSRAHGAKSSKPNQKRQAYS
TrEMBL top hitse value%identityAlignment
A0A1S3CC17 uncharacterized protein LOC1034992485.3e-2056Show/hide
Query:  GHPN-----DKCPDLIEDVNVI-RKDRATGGRCKISLDIGLQVTTKYMEEGDMDINIKDFDIPNPHGLEPTSGKDMPSTPTSRAHGAKSSKPNQKRQAYS
        GHPN     +K      D+ ++  +DRATGGRCK  +++GLQ+  +  EE DMDIN++DFDIPNPHGLEP SG+DM STPTS AH   SSKP++KR++YS
Subjt:  GHPN-----DKCPDLIEDVNVI-RKDRATGGRCKISLDIGLQVTTKYMEEGDMDINIKDFDIPNPHGLEPTSGKDMPSTPTSRAHGAKSSKPNQKRQAYS
A0A5A7T590 Retrotransposon protein3.4e-1953.27Show/hide
Query:  CGVCGLVGHPN-----DKCPDLIEDVNVI-RKDRATGGRCKISLDIGLQVTTKYMEEGDMDINIKDFDIPNPHGLEPTSGKDMPSTPTSRAHGAKSSKPN
        C + GL  HPN     +K      D+ ++  +DRATGGRCK  +++GLQ TT+  E+ DMDIN++DFDIPNPHGLEP SG+DM STPTS  H A+SS+ +
Subjt:  CGVCGLVGHPN-----DKCPDLIEDVNVI-RKDRATGGRCKISLDIGLQVTTKYMEEGDMDINIKDFDIPNPHGLEPTSGKDMPSTPTSRAHGAKSSKPN

Query:  QKRQAYS
        +KR++YS
Subjt:  QKRQAYS
A0A5A7VGQ0 Retrotransposon protein5.3e-2056Show/hide
Query:  GHPN-----DKCPDLIEDVNVI-RKDRATGGRCKISLDIGLQVTTKYMEEGDMDINIKDFDIPNPHGLEPTSGKDMPSTPTSRAHGAKSSKPNQKRQAYS
        GHPN     +K      D+ ++  +DRATGGRCK  +++GLQ+  +  EE DMDIN++DFDIPNPHGLEP SG+DM STPTS AH   SSKP++KR++YS
Subjt:  GHPN-----DKCPDLIEDVNVI-RKDRATGGRCKISLDIGLQVTTKYMEEGDMDINIKDFDIPNPHGLEPTSGKDMPSTPTSRAHGAKSSKPNQKRQAYS
A0A5D3C7T4 Uncharacterized protein2.0e-1956Show/hide
Query:  GHPN-----DKCPDLIEDVNVI-RKDRATGGRCKISLDIGLQVTTKYMEEGDMDINIKDFDIPNPHGLEPTSGKDMPSTPTSRAHGAKSSKPNQKRQAYS
        GHPN     +K      D+ V+  +DRATGGRCK  +++  Q T +  EE DMDIN++DFDIPNPHGLEP SG+DMPSTPTS  H A SS+P++KR++YS
Subjt:  GHPN-----DKCPDLIEDVNVI-RKDRATGGRCKISLDIGLQVTTKYMEEGDMDINIKDFDIPNPHGLEPTSGKDMPSTPTSRAHGAKSSKPNQKRQAYS
A0A5D3CKC1 Retrotransposon protein7.6e-1954Show/hide
Query:  GHPN-----DKCPDLIEDVNVI-RKDRATGGRCKISLDIGLQVTTKYMEEGDMDINIKDFDIPNPHGLEPTSGKDMPSTPTSRAHGAKSSKPNQKRQAYS
        GHPN     +K      D+ ++  +DRATGGRCK  +++GLQ+  +  EE DMDIN++DFDIPNPHGLEP SG+DM STPTS A+   SS+P++KR++YS
Subjt:  GHPN-----DKCPDLIEDVNVI-RKDRATGGRCKISLDIGLQVTTKYMEEGDMDINIKDFDIPNPHGLEPTSGKDMPSTPTSRAHGAKSSKPNQKRQAYS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTACTCTTCTTACTTCTTTTATGGAAGGTGGTCCTCTCAAAGTAACCAAGTGTGGAGTTTGTGGCTTGGTTGGACATCCCAATGATAAATGCCCCGACTTGATCGA
GGATGTGAATGTCATTCGTAAGGATAGAGCTACTGGTGGTAGATGTAAGATATCTCTTGACATAGGATTACAAGTTACTACAAAATATATGGAGGAAGGTGACATGGACA
TTAATATAAAAGATTTTGATATACCAAATCCACATGGACTTGAGCCTACATCAGGGAAGGACATGCCATCTACTCCTACAAGCAGGGCACATGGTGCAAAATCGTCCAAA
CCAAATCAGAAAAGGCAGGCATATTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGACTACTCTTCTTACTTCTTTTATGGAAGGTGGTCCTCTCAAAGTAACCAAGTGTGGAGTTTGTGGCTTGGTTGGACATCCCAATGATAAATGCCCCGACTTGATCGA
GGATGTGAATGTCATTCGTAAGGATAGAGCTACTGGTGGTAGATGTAAGATATCTCTTGACATAGGATTACAAGTTACTACAAAATATATGGAGGAAGGTGACATGGACA
TTAATATAAAAGATTTTGATATACCAAATCCACATGGACTTGAGCCTACATCAGGGAAGGACATGCCATCTACTCCTACAAGCAGGGCACATGGTGCAAAATCGTCCAAA
CCAAATCAGAAAAGGCAGGCATATTCATGA
Protein sequenceShow/hide protein sequence
MTTLLTSFMEGGPLKVTKCGVCGLVGHPNDKCPDLIEDVNVIRKDRATGGRCKISLDIGLQVTTKYMEEGDMDINIKDFDIPNPHGLEPTSGKDMPSTPTSRAHGAKSSK
PNQKRQAYS