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PI0013042 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013042
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr10:16091059..16091265
RNA-Seq ExpressionPI0013042
SyntenyPI0013042
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_009140188.1 uncharacterized protein LOC103864181 [Brassica rapa]1.6e-1556.72Show/hide
Query:  LYAMSYLKLPKFLWDDVARAMTHFWWGSSMNCKKIHWVSWNRMCILKEFGGMGFWDLEGFNKALLAK
        L+AMS  KLPK +   ++ AM  FWWG+  + KKIHW+SW+++C+ KE+GG+GF DLE FN+ALLAK
Subjt:  LYAMSYLKLPKFLWDDVARAMTHFWWGSSMNCKKIHWVSWNRMCILKEFGGMGFWDLEGFNKALLAK
XP_013639569.1 PREDICTED: uncharacterized protein LOC106344806 [Brassica oleracea var. oleracea]2.4e-1658.21Show/hide
Query:  LYAMSYLKLPKFLWDDVARAMTHFWWGSSMNCKKIHWVSWNRMCILKEFGGMGFWDLEGFNKALLAK
        +YAMS  KLPK + D+++ AM +FWWGS  + KKIHW++W++ C+ K+ GGMGF DLE FN ALLAK
Subjt:  LYAMSYLKLPKFLWDDVARAMTHFWWGSSMNCKKIHWVSWNRMCILKEFGGMGFWDLEGFNKALLAK
XP_013699864.1 uncharacterized protein LOC106403595 [Brassica napus]4.6e-1556.72Show/hide
Query:  LYAMSYLKLPKFLWDDVARAMTHFWWGSSMNCKKIHWVSWNRMCILKEFGGMGFWDLEGFNKALLAK
        +Y MS  KLPK +  +++ AM  FWWGS  + KKIHW++W ++C+ KE GGMGF DLE FN+ALLAK
Subjt:  LYAMSYLKLPKFLWDDVARAMTHFWWGSSMNCKKIHWVSWNRMCILKEFGGMGFWDLEGFNKALLAK
XP_013704699.1 uncharacterized protein LOC106408472 [Brassica napus]4.6e-1555.22Show/hide
Query:  LYAMSYLKLPKFLWDDVARAMTHFWWGSSMNCKKIHWVSWNRMCILKEFGGMGFWDLEGFNKALLAK
        ++AMS  KLPK +  +++ AM +FWWGS  + +KIHW++W ++C+ KE GGMGF DLE FN+ALLAK
Subjt:  LYAMSYLKLPKFLWDDVARAMTHFWWGSSMNCKKIHWVSWNRMCILKEFGGMGFWDLEGFNKALLAK
XP_022131662.1 uncharacterized protein LOC111004787 [Momordica charantia]1.6e-1557.58Show/hide
Query:  YAMSYLKLPKFLWDDVARAMTHFWWGSSMNCKKIHWVSWNRMCILKEFGGMGFWDLEGFNKALLAK
        YAMS  +LPK   ++V++    FWWGSS + KK+HW+SW RMC+ KE GG+ F DLEGFN+AL+AK
Subjt:  YAMSYLKLPKFLWDDVARAMTHFWWGSSMNCKKIHWVSWNRMCILKEFGGMGFWDLEGFNKALLAK
TrEMBL top hitse value%identityAlignment
A0A1J3DQV4 Putative mitochondrial protein2.9e-1558.21Show/hide
Query:  LYAMSYLKLPKFLWDDVARAMTHFWWGSSMNCKKIHWVSWNRMCILKEFGGMGFWDLEGFNKALLAK
        +YAMS  +LPK +   + RAM  FWW S  N KKIHW+SW +MC+ K  GGMGF D+E FN+ALLAK
Subjt:  LYAMSYLKLPKFLWDDVARAMTHFWWGSSMNCKKIHWVSWNRMCILKEFGGMGFWDLEGFNKALLAK
A0A6J0LJJ3 uncharacterized protein LOC1088311023.8e-1555.22Show/hide
Query:  LYAMSYLKLPKFLWDDVARAMTHFWWGSSMNCKKIHWVSWNRMCILKEFGGMGFWDLEGFNKALLAK
        ++AMS  K+PK L D ++ AM  FWWG+  + KKIHW++W+++C+ KE GGMGF DL  FN+ALLAK
Subjt:  LYAMSYLKLPKFLWDDVARAMTHFWWGSSMNCKKIHWVSWNRMCILKEFGGMGFWDLEGFNKALLAK
A0A6J0LN06 uncharacterized protein LOC1088322698.5e-1552.24Show/hide
Query:  LYAMSYLKLPKFLWDDVARAMTHFWWGSSMNCKKIHWVSWNRMCILKEFGGMGFWDLEGFNKALLAK
        +++MS  KLPK +  +++ AM +FWWGS  + +KIHW+SW ++C+ K+ GGMGF +LE FN+ALLAK
Subjt:  LYAMSYLKLPKFLWDDVARAMTHFWWGSSMNCKKIHWVSWNRMCILKEFGGMGFWDLEGFNKALLAK
A0A6J0N7Y1 uncharacterized protein LOC1088510325.0e-1553.73Show/hide
Query:  LYAMSYLKLPKFLWDDVARAMTHFWWGSSMNCKKIHWVSWNRMCILKEFGGMGFWDLEGFNKALLAK
        +Y MS  +LPK +  ++A AM ++WWG+  + +KIHW+SW+++C+ KE GGMGF DLE FN+ALLAK
Subjt:  LYAMSYLKLPKFLWDDVARAMTHFWWGSSMNCKKIHWVSWNRMCILKEFGGMGFWDLEGFNKALLAK
A0A6J1BRN0 uncharacterized protein LOC1110047877.7e-1657.58Show/hide
Query:  YAMSYLKLPKFLWDDVARAMTHFWWGSSMNCKKIHWVSWNRMCILKEFGGMGFWDLEGFNKALLAK
        YAMS  +LPK   ++V++    FWWGSS + KK+HW+SW RMC+ KE GG+ F DLEGFN+AL+AK
Subjt:  YAMSYLKLPKFLWDDVARAMTHFWWGSSMNCKKIHWVSWNRMCILKEFGGMGFWDLEGFNKALLAK
SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657502.0e-0532.84Show/hide
Query:  LYAMSYLKLPKFLWDDVARAMTHFWWGSSMNCKKIHWVSWNRMCILKEFGGMGFWDLEGFNKALLAK
        +++MS + LP+ + + + +    F WGS+   KK H V W+++C  K+ GG+G    +  N+AL++K
Subjt:  LYAMSYLKLPKFLWDDVARAMTHFWWGSSMNCKKIHWVSWNRMCILKEFGGMGFWDLEGFNKALLAK
P93295 Uncharacterized mitochondrial protein AtMg003107.6e-1352.94Show/hide
Query:  LYAMSYLKLPKFLWDDVARAMTHFWWGSSMNCKKIHWVSWNRMCILKE-FGGMGFWDLEGFNKALLAK
        +YAMS  +L K L   +  AMT FWW S  N +KI WV+W ++C  KE  GG+GF DL  FN+ALLAK
Subjt:  LYAMSYLKLPKFLWDDVARAMTHFWWGSSMNCKKIHWVSWNRMCILKE-FGGMGFWDLEGFNKALLAK
Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein2.1e-1037.88Show/hide
Query:  YAMSYLKLPKFLWDDVARAMTHFWWGSSMNCKKIHWVSWNRMCILKEFGGMGFWDLEGFNKALLAK
        Y M+   LPK +   +   +  FWW +    K +HW +W+ +   K  GG+GF D+E FN ALL K
Subjt:  YAMSYLKLPKFLWDDVARAMTHFWWGSSMNCKKIHWVSWNRMCILKEFGGMGFWDLEGFNKALLAK
ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein5.4e-1452.94Show/hide
Query:  LYAMSYLKLPKFLWDDVARAMTHFWWGSSMNCKKIHWVSWNRMCILKE-FGGMGFWDLEGFNKALLAK
        +YAMS  +L K L   +  AMT FWW S  N +KI WV+W ++C  KE  GG+GF DL  FN+ALLAK
Subjt:  LYAMSYLKLPKFLWDDVARAMTHFWWGSSMNCKKIHWVSWNRMCILKE-FGGMGFWDLEGFNKALLAK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTTATGCTATGTCCTATCTCAAGCTTCCAAAGTTTCTTTGGGATGATGTGGCTAGAGCCATGACTCACTTTTGGTGGGGATCCTCCATGAATTGTAAGAAAATTCA
TTGGGTTAGCTGGAATCGGATGTGTATACTGAAGGAGTTTGGAGGGATGGGGTTTTGGGATTTGGAAGGTTTCAATAAAGCTTTGTTAGCTAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTTATGCTATGTCCTATCTCAAGCTTCCAAAGTTTCTTTGGGATGATGTGGCTAGAGCCATGACTCACTTTTGGTGGGGATCCTCCATGAATTGTAAGAAAATTCA
TTGGGTTAGCTGGAATCGGATGTGTATACTGAAGGAGTTTGGAGGGATGGGGTTTTGGGATTTGGAAGGTTTCAATAAAGCTTTGTTAGCTAAGTAA
Protein sequenceShow/hide protein sequence
MLYAMSYLKLPKFLWDDVARAMTHFWWGSSMNCKKIHWVSWNRMCILKEFGGMGFWDLEGFNKALLAK