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PI0013046 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013046
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr12:17287650..17288288
RNA-Seq ExpressionPI0013046
SyntenyPI0013046
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAU18007.1 hypothetical protein TSUD_51170 [Trifolium subterraneum]1.0e-1354.88Show/hide
Query:  DKTWYLDTRESNHMCGVKSI-----------------TKVEVKEKGNIFIRLKNGEHQLVSNIYYMSNMKSNILSLSQLLEK
        D  WYLD+  SNHMCG +S+                 +KV VK KGN+ IRLKNG+HQ +SN+YY+ NMKSNILSL QLLEK
Subjt:  DKTWYLDTRESNHMCGVKSI-----------------TKVEVKEKGNIFIRLKNGEHQLVSNIYYMSNMKSNILSLSQLLEK

GAU31151.1 hypothetical protein TSUD_315750 [Trifolium subterraneum]1.0e-1354.88Show/hide
Query:  DKTWYLDTRESNHMCGVKSI-----------------TKVEVKEKGNIFIRLKNGEHQLVSNIYYMSNMKSNILSLSQLLEK
        D  WYLD+  SNHMCG +S+                 +KV VK KGN+ IR KNG+HQ +SN+YY+SNMKSNILSL QLLEK
Subjt:  DKTWYLDTRESNHMCGVKSI-----------------TKVEVKEKGNIFIRLKNGEHQLVSNIYYMSNMKSNILSLSQLLEK

GAU34810.1 hypothetical protein TSUD_394360 [Trifolium subterraneum]1.0e-1354.88Show/hide
Query:  DKTWYLDTRESNHMCGVKSI-----------------TKVEVKEKGNIFIRLKNGEHQLVSNIYYMSNMKSNILSLSQLLEK
        D  WYLD+  SNHMCG +S+                 +KV VK KGN+ IRLKNG+HQ +SN+YY+ NMKSNILSL QLLEK
Subjt:  DKTWYLDTRESNHMCGVKSI-----------------TKVEVKEKGNIFIRLKNGEHQLVSNIYYMSNMKSNILSLSQLLEK

KAA0040440.1 lectin receptor kinase [Cucumis melo var. makuwa]1.1e-1541.36Show/hide
Query:  VEELVPIIEVYKDENMVD-EEEDKDEDVVGGPMKTIKITTKEDRKTQRKVVDKTTQDQETLNVIIVKSLVIMHPNVELLETVDKWSKDKTWYLDTRESNH
        VEELVPII+  KD N+V+ E+E++D+DV+GG MKT  IT KED +TQ+KVVDK TQDQE     ++ +            T  +W+KD TWYLDT  +N+
Subjt:  VEELVPIIEVYKDENMVD-EEEDKDEDVVGGPMKTIKITTKEDRKTQRKVVDKTTQDQETLNVIIVKSLVIMHPNVELLETVDKWSKDKTWYLDTRESNH

Query:  MCGVKSI-----------------TKVEVKEKG---NIFIRLKNG---EHQLVSNIYYMSNM
        MCGV+S+                 +KVEVK +       ++LKN    EH  V  +  +S++
Subjt:  MCGVKSI-----------------TKVEVKEKG---NIFIRLKNG---EHQLVSNIYYMSNM

KAG7548500.1 Zinc finger CCHC-type [Arabidopsis suecica]7.7e-1452.33Show/hide
Query:  KWSKDKTWYLDTRESNHMCGVKSI-----------------TKVEVKEKGNIFIRLKNGEHQLVSNIYYMSNMKSNILSLSQLLEK
        ++ ++  WYLD+  SNHMCG KSI                 +K+EVK KGNI IRLKNG+HQ +SN+YY+ +MK+NILSL QLLEK
Subjt:  KWSKDKTWYLDTRESNHMCGVKSI-----------------TKVEVKEKGNIFIRLKNGEHQLVSNIYYMSNMKSNILSLSQLLEK

TrEMBL top hitse value%identityAlignment
A0A2Z6M8Q0 Uncharacterized protein4.9e-1454.88Show/hide
Query:  DKTWYLDTRESNHMCGVKSI-----------------TKVEVKEKGNIFIRLKNGEHQLVSNIYYMSNMKSNILSLSQLLEK
        D  WYLD+  SNHMCG +S+                 +KV VK KGN+ IRLKNG+HQ +SN+YY+ NMKSNILSL QLLEK
Subjt:  DKTWYLDTRESNHMCGVKSI-----------------TKVEVKEKGNIFIRLKNGEHQLVSNIYYMSNMKSNILSLSQLLEK

A0A2Z6MH94 CCHC-type domain-containing protein4.9e-1454.88Show/hide
Query:  DKTWYLDTRESNHMCGVKSI-----------------TKVEVKEKGNIFIRLKNGEHQLVSNIYYMSNMKSNILSLSQLLEK
        D  WYLD+  SNHMCG +S+                 +KV VK KGN+ IR KNG+HQ +SN+YY+SNMKSNILSL QLLEK
Subjt:  DKTWYLDTRESNHMCGVKSI-----------------TKVEVKEKGNIFIRLKNGEHQLVSNIYYMSNMKSNILSLSQLLEK

A0A2Z6MI82 CCHC-type domain-containing protein4.9e-1454.88Show/hide
Query:  DKTWYLDTRESNHMCGVKSI-----------------TKVEVKEKGNIFIRLKNGEHQLVSNIYYMSNMKSNILSLSQLLEK
        D  WYLD+  SNHMCG +S+                 +KV VK KGN+ IRLKNG+HQ +SN+YY+ NMKSNILSL QLLEK
Subjt:  DKTWYLDTRESNHMCGVKSI-----------------TKVEVKEKGNIFIRLKNGEHQLVSNIYYMSNMKSNILSLSQLLEK

A0A2Z6NEL1 Integrase catalytic domain-containing protein4.9e-1454.88Show/hide
Query:  DKTWYLDTRESNHMCGVKSI-----------------TKVEVKEKGNIFIRLKNGEHQLVSNIYYMSNMKSNILSLSQLLEK
        D  WYLD+  SNHMCG +S+                 +KV VK KGN+ IRLKNG+HQ +SN+YY+ NMKSNILSL QLLEK
Subjt:  DKTWYLDTRESNHMCGVKSI-----------------TKVEVKEKGNIFIRLKNGEHQLVSNIYYMSNMKSNILSLSQLLEK

A0A5D3DZJ9 Lectin receptor kinase5.2e-1641.36Show/hide
Query:  VEELVPIIEVYKDENMVD-EEEDKDEDVVGGPMKTIKITTKEDRKTQRKVVDKTTQDQETLNVIIVKSLVIMHPNVELLETVDKWSKDKTWYLDTRESNH
        VEELVPII+  KD N+V+ E+E++D+DV+GG MKT  IT KED +TQ+KVVDK TQDQE     ++ +            T  +W+KD TWYLDT  +N+
Subjt:  VEELVPIIEVYKDENMVD-EEEDKDEDVVGGPMKTIKITTKEDRKTQRKVVDKTTQDQETLNVIIVKSLVIMHPNVELLETVDKWSKDKTWYLDTRESNH

Query:  MCGVKSI-----------------TKVEVKEKG---NIFIRLKNG---EHQLVSNIYYMSNM
        MCGV+S+                 +KVEVK +       ++LKN    EH  V  +  +S++
Subjt:  MCGVKSI-----------------TKVEVKEKG---NIFIRLKNG---EHQLVSNIYYMSNM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAAAGAAAAATAAGAAGGAAGGAATTGAGGATCAATTGCTCAAGTTACGAGTTGATTCTACTAGTGGAGGAGTTAGTCCCAATAATAGAAGTGTACAAGGACGA
GAACATGGTGGACGAAGAAGAGGACAAGGACGAGGATGTGGTTGGAGGCCCAATGAAGACAATAAAAATAACTACCAAAGAGGATCGGAAAACTCAACGAAAGGTTGTGG
ACAAGACAACTCAAGATCAAGAAACATTAAATGTTATAATTGTTAAAAGTTTGGTCATTATGCATCCGAATGTAGAGCTTCTAGAAACAGTAGACAAATGGAGCAAAGAT
AAAACATGGTACCTAGACACTAGGGAAAGCAACCATATGTGTGGAGTAAAAAGCATCACCAAGGTAGAAGTAAAAGAAAAAGGTAATATTTTCATCCGATTAAAGAATGG
TGAGCACCAACTTGTTTCAAATATCTATTATATGTCAAATATGAAGAGTAATATCTTGAGTCTGAGCCAACTCTTAGAAAAAAGGTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAAAGAAAAATAAGAAGGAAGGAATTGAGGATCAATTGCTCAAGTTACGAGTTGATTCTACTAGTGGAGGAGTTAGTCCCAATAATAGAAGTGTACAAGGACGA
GAACATGGTGGACGAAGAAGAGGACAAGGACGAGGATGTGGTTGGAGGCCCAATGAAGACAATAAAAATAACTACCAAAGAGGATCGGAAAACTCAACGAAAGGTTGTGG
ACAAGACAACTCAAGATCAAGAAACATTAAATGTTATAATTGTTAAAAGTTTGGTCATTATGCATCCGAATGTAGAGCTTCTAGAAACAGTAGACAAATGGAGCAAAGAT
AAAACATGGTACCTAGACACTAGGGAAAGCAACCATATGTGTGGAGTAAAAAGCATCACCAAGGTAGAAGTAAAAGAAAAAGGTAATATTTTCATCCGATTAAAGAATGG
TGAGCACCAACTTGTTTCAAATATCTATTATATGTCAAATATGAAGAGTAATATCTTGAGTCTGAGCCAACTCTTAGAAAAAAGGTTATGA
Protein sequenceShow/hide protein sequence
MKKRKIRRKELRINCSSYELILLVEELVPIIEVYKDENMVDEEEDKDEDVVGGPMKTIKITTKEDRKTQRKVVDKTTQDQETLNVIIVKSLVIMHPNVELLETVDKWSKD
KTWYLDTRESNHMCGVKSITKVEVKEKGNIFIRLKNGEHQLVSNIYYMSNMKSNILSLSQLLEKRL