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PI0013058 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013058
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptiontranscription factor IIIA-like
Genome locationchr08:22706067..22708623
RNA-Seq ExpressionPI0013058
SyntenyPI0013058
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR013087 - Zinc finger C2H2-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573793.1 Sigma factor binding protein 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.5e-0773.33Show/hide
Query:  MESGNPKDDEDVKAKGNKSNICQDCGADLKKLAYLKQHMQSHSFE
        MESG  KDD D KAK  KSNIC +CGA  KK AYLKQHMQSHS E
Subjt:  MESGNPKDDEDVKAKGNKSNICQDCGADLKKLAYLKQHMQSHSFE
XP_022945877.1 transcription factor IIIA-like [Cucurbita moschata]1.5e-0773.33Show/hide
Query:  MESGNPKDDEDVKAKGNKSNICQDCGADLKKLAYLKQHMQSHSFE
        MESG  KDD D KAK  KSNIC +CGA  KK AYLKQHMQSHS E
Subjt:  MESGNPKDDEDVKAKGNKSNICQDCGADLKKLAYLKQHMQSHSFE
XP_022966871.1 transcription factor IIIA-like [Cucurbita maxima]8.8e-0873.33Show/hide
Query:  MESGNPKDDEDVKAKGNKSNICQDCGADLKKLAYLKQHMQSHSFE
        MESG  KDD D KAK  KSNIC +CGA  KK AYLKQHMQSHS E
Subjt:  MESGNPKDDEDVKAKGNKSNICQDCGADLKKLAYLKQHMQSHSFE
XP_023542929.1 transcription factor IIIA-like [Cucurbita pepo subsp. pepo]4.4e-0771.11Show/hide
Query:  MESGNPKDDEDVKAKGNKSNICQDCGADLKKLAYLKQHMQSHSFE
        MESG  KDD D  AK  KSNIC +CGA  KK AYLKQHMQSHS E
Subjt:  MESGNPKDDEDVKAKGNKSNICQDCGADLKKLAYLKQHMQSHSFE
XP_038905330.1 transcription factor IIIA-like [Benincasa hispida]2.0e-1284.44Show/hide
Query:  MESGNPKDDEDVKAKGNKSNICQDCGADLKKLAYLKQHMQSHSFE
        MESG PKDD D KAKG KSNICQDCG D KK AYLKQHMQSHSFE
Subjt:  MESGNPKDDEDVKAKGNKSNICQDCGADLKKLAYLKQHMQSHSFE
TrEMBL top hitse value%identityAlignment
A0A0A0KV54 Uncharacterized protein2.3e-0663.83Show/hide
Query:  RWMESGNPKDDEDVKAKGNKSNICQDCGADLKKLAYLKQHMQSHSFE
        R ME G   DD D K K  K NICQ CGA  +K AYLKQHMQSHS E
Subjt:  RWMESGNPKDDEDVKAKGNKSNICQDCGADLKKLAYLKQHMQSHSFE
A0A6J1G248 transcription factor IIIA-like7.3e-0873.33Show/hide
Query:  MESGNPKDDEDVKAKGNKSNICQDCGADLKKLAYLKQHMQSHSFE
        MESG  KDD D KAK  KSNIC +CGA  KK AYLKQHMQSHS E
Subjt:  MESGNPKDDEDVKAKGNKSNICQDCGADLKKLAYLKQHMQSHSFE
A0A6J1H0A5 transcription factor IIIA isoform X11.5e-0566.67Show/hide
Query:  MESGNPKDDEDVKAKGNKSNICQDCGADLKKLAYLKQHMQSHSFE
        MESG   D  D K    KSNICQ+CGA+ KK AYLKQHMQSHS E
Subjt:  MESGNPKDDEDVKAKGNKSNICQDCGADLKKLAYLKQHMQSHSFE
A0A6J1HQH9 transcription factor IIIA-like4.3e-0873.33Show/hide
Query:  MESGNPKDDEDVKAKGNKSNICQDCGADLKKLAYLKQHMQSHSFE
        MESG  KDD D KAK  KSNIC +CGA  KK AYLKQHMQSHS E
Subjt:  MESGNPKDDEDVKAKGNKSNICQDCGADLKKLAYLKQHMQSHSFE
A0A6J1JLR2 transcription factor IIIA isoform X11.1e-0664.44Show/hide
Query:  MESGNPKDDEDVKAKGNKSNICQDCGADLKKLAYLKQHMQSHSFE
        MESG   D+   + K  KSNICQ+CGA+ KK AYLKQHMQSHS E
Subjt:  MESGNPKDDEDVKAKGNKSNICQDCGADLKKLAYLKQHMQSHSFE
SwissProt top hitse value%identityAlignment
Q84MZ4 Transcription factor IIIA1.9e-0551.06Show/hide
Query:  MESGNPKDDE--DVKAKGNKSNICQDCGADLKKLAYLKQHMQSHSFE
        ME    +DDE  +V  + + ++ CQ+CGA+ KK A+LKQHMQSHS E
Subjt:  MESGNPKDDE--DVKAKGNKSNICQDCGADLKKLAYLKQHMQSHSFE
Arabidopsis top hitse value%identityAlignment
AT1G72050.2 transcription factor IIIA1.4e-0651.06Show/hide
Query:  MESGNPKDDE--DVKAKGNKSNICQDCGADLKKLAYLKQHMQSHSFE
        ME    +DDE  +V  + + ++ CQ+CGA+ KK A+LKQHMQSHS E
Subjt:  MESGNPKDDE--DVKAKGNKSNICQDCGADLKKLAYLKQHMQSHSFE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTAATCAAACAAATCAATCAATGAATTTAAACACAGAACACTACACAAACCCTCGGTTTCTTTTCTTCGATTTTGGAAAGCGCTGGATGGAGAGTGGAAACCCGAA
AGACGATGAAGATGTTAAGGCAAAAGGGAACAAATCCAATATTTGCCAGGATTGTGGTGCTGATTTAAAAAAACTTGCTTACTTGAAGCAACACATGCAAAGCCATTCCT
TCGAGACTGGCAGTCAATTTTCATTGGCGGCTCTTCGACTTTGGCCATCAATTTTACGGTCCAATCTTTTTCTTCCATCGAAGGCGATTAGTTTTGCAGGAACAAATCCA
TAA
mRNA sequenceShow/hide mRNA sequence
GAGACATTCGAACCTCAAGACTTCGAGATTTGTAGAAATAGTTTGCCTTCTTCCCCAAGAAGAAGAACCCTTCTGGTAAAAGGTAGAAAATCTTCGTTTCAAACGATAGT
ACGGCTTCGGGATAATACCCTAATCTGTCTAATAACTACTTTAGTACGTTCACAAACTCCTAACATCAATTTACTCTCAGCTAACTTCGATTCTTTGTAAAACCAAAATC
AAAATCAAAATCACGATCAAGATGCGTAATCAAACAAATCAATCAATGAATTTAAACACAGAACACTACACAAACCCTCGGTTTCTTTTCTTCGATTTTGGAAAGCGCTG
GATGGAGAGTGGAAACCCGAAAGACGATGAAGATGTTAAGGCAAAAGGGAACAAATCCAATATTTGCCAGGATTGTGGTGCTGATTTAAAAAAACTTGCTTACTTGAAGC
AACACATGCAAAGCCATTCCTTCGAGACTGGCAGTCAATTTTCATTGGCGGCTCTTCGACTTTGGCCATCAATTTTACGGTCCAATCTTTTTCTTCCATCGAAGGCGATT
AGTTTTGCAGGAACAAATCCATAAATGTATTAACATAATGTGATCTGATCCTGGATATCTCAGCGTGAAGCATTGGATTCCACAACAAGAACTCCAAAATGCACGAGGTT
GCATTTTCTTTCTTGATTGGATCAGTATCAGGTTGGGAGACCTCCTGAGAAGCTCCTTCAAGTGGGCCTCAGTCGCGCTACTATAATTTGAGATGGTTGTCAATCCAGTT
ATAGAAGAAAGGATTATTTGACACGCCACCTTCTCCAGCACCAAGGAATAACATTCAAGTGTCCAATTGAGAGTTGTAGCCGTGATTTGCATATCTATCTAGTGTAAATA
GACACTTGAAAGAATTCCATGATGATAATGCTCCTCCTGAAGTTGAATGTCAGAAACAGTTTGTTTGTCCAGAGGATGGATGTGGAAAGGTGTTTATATGCATCTCGACT
GCCAAAGCATGAAGATTCTCGTGTTAAGCTGTACTCAATAGAGGCACATTGAACTGCACCGGGTTGCATGAAAACATGCACCAACAAGCAATGCCTTACGGCTCATAGAC
AGTCCTGCCACAAGTACATATCTTGTGAGATTTGTGGGAAAAGAAAATTGAGAAAGAACATGAAACAGCATTTATGACAAAAGCACGAGAGCGAAGGTCTGCAAAAGACA
GTTCAATGCACGCATGAGAGCTGTTGTGTAAGGTCTTTTCATCAGTAAGTAGCACAGACTTTGCAAATGCGTTTATGAGTGAAACTACTTTTAGCTGAGCTATAGGGCTT
CCCAATTATTAATGTCTTTATTTGATATGTTCCCTTGTTTATAATGTCTCAGATTTCAAATCTCCGCCAAAATATGAAAGTTAAGCACTTGGGTCAAAAACCTTTTGCTT
GTGGCTTTTCTGGTTGGAGCATGAGATTTGGCTACAAGCATGTTAGGGACAATCAAGAGAAAAATGGCCACCATGTTTTACACTAACATAAGTTTGCATTTAGAAAACTT
TATATATTTATGTACATTTGACCTTTAAAAAGATTATTTAAGGTGCTTGTTACTCTGGTAATCAGGGGGATTTTGAAGTAGCTGATCAACAATCCCGCTCAAAGCCAAGG
GGAGGACGAACAAGAAAATGTCCAACTGTCGAAATGCTTATATGGAAGCAGGTTACCCTCGCAGCATGGGATTTCACTATGGATGAAGGGTTCTAAGGCTTTTTTGTGAG
TACTCAAACCTCTAACCTCTTTTGGTTGTGGACACATGCCTTATGAAGCTTGTTTGCTGACACTCTACTAGTAAGAAGTGGCCCCCTTTGTTAAAAATCCATGTTCATTA
CAAATATTTGGTGGCTAACCAATGTATAGAATGATAGAATCCGTATGTATAATTATACCCCAACGGAGAACGAAGAGAACAATGACAAACACTTAAGAGATGTGTTATCG
TCTAGTGTGTTTAGTTTTTTC
Protein sequenceShow/hide protein sequence
MRNQTNQSMNLNTEHYTNPRFLFFDFGKRWMESGNPKDDEDVKAKGNKSNICQDCGADLKKLAYLKQHMQSHSFETGSQFSLAALRLWPSILRSNLFLPSKAISFAGTNP