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PI0013061 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013061
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description50S ribosomal protein L7/L12
Genome locationchr10:17744008..17746885
RNA-Seq ExpressionPI0013061
SyntenyPI0013061
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0006508 - proteolysis (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsIPR000206 - Ribosomal protein L7/L12
IPR013823 - Ribosomal protein L7/L12, C-terminal
IPR014719 - Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034198.1 50S ribosomal protein L7/L12 [Cucumis melo var. makuwa]3.9e-4689.26Show/hide
Query:  MSVARSVRHSPKDLDILSCSQFQWMAWTWVLK---EGAAAGSSKAEEKKEKTAFDVKLEKFDGASKIKVIKEVNSFTNLGLKEAKDLVEKVPAILKQGVT
        MSVARSVRHS KDLDILS SQFQWMAWT V K    GAAAGSSKAEEK+EKTAFDVKLEKFD ASKIKVIKEV SFTNLGLKEAKDLVEKVPAILKQGVT
Subjt:  MSVARSVRHSPKDLDILSCSQFQWMAWTWVLK---EGAAAGSSKAEEKKEKTAFDVKLEKFDGASKIKVIKEVNSFTNLGLKEAKDLVEKVPAILKQGVT

Query:  KEEATDIIEKIKAAGGIAVME
        KEEA DIIEKIKAAGG+AVME
Subjt:  KEEATDIIEKIKAAGGIAVME

XP_008450561.1 PREDICTED: 50S ribosomal protein L7/L12 [Cucumis melo]3.9e-3090.59Show/hide
Query:  GAAAGSSKAEEKKEKTAFDVKLEKFDGASKIKVIKEVNSFTNLGLKEAKDLVEKVPAILKQGVTKEEATDIIEKIKAAGGIAVME
        GAAAGSS  EEKKEKTAFDVKLEKFD ASKIKVIKEV +FTNLGLKEAKDLVEKVPAILKQGVTKEEA  IIEKIKAAGG+AVME
Subjt:  GAAAGSSKAEEKKEKTAFDVKLEKFDGASKIKVIKEVNSFTNLGLKEAKDLVEKVPAILKQGVTKEEATDIIEKIKAAGGIAVME

XP_011651634.1 uncharacterized protein LOC101206962 [Cucumis sativus]3.9e-3090.59Show/hide
Query:  GAAAGSSKAEEKKEKTAFDVKLEKFDGASKIKVIKEVNSFTNLGLKEAKDLVEKVPAILKQGVTKEEATDIIEKIKAAGGIAVME
        GAAAGSS  EEKKEKTAFDVKLEKFD ASKIKVIKEV +FTNLGLKEAKDLVEKVPAILKQGVTKEEA  IIEKIKAAGG+AVME
Subjt:  GAAAGSSKAEEKKEKTAFDVKLEKFDGASKIKVIKEVNSFTNLGLKEAKDLVEKVPAILKQGVTKEEATDIIEKIKAAGGIAVME

XP_022155073.1 uncharacterized protein LOC111022207 [Momordica charantia]4.7e-3191.76Show/hide
Query:  GAAAGSSKAEEKKEKTAFDVKLEKFDGASKIKVIKEVNSFTNLGLKEAKDLVEKVPAILKQGVTKEEATDIIEKIKAAGGIAVME
        GA AGSSK EEKKEKTAFDVKLEKFD A+KIKVIKEV SFTNLGLKEAKDLVEKVPAILKQGVTKEEA DIIEKIKAAGG+AVME
Subjt:  GAAAGSSKAEEKKEKTAFDVKLEKFDGASKIKVIKEVNSFTNLGLKEAKDLVEKVPAILKQGVTKEEATDIIEKIKAAGGIAVME

XP_038905834.1 50S ribosomal protein L7/L12 [Benincasa hispida]2.1e-3192.94Show/hide
Query:  GAAAGSSKAEEKKEKTAFDVKLEKFDGASKIKVIKEVNSFTNLGLKEAKDLVEKVPAILKQGVTKEEATDIIEKIKAAGGIAVME
        GA AGSSK EEKKEKTAFDVKLEKFD ASKIKVIKEV SFTNLGLKEAKDLVEKVPAILKQGVTKEEA DIIEKIKAAGG+AVME
Subjt:  GAAAGSSKAEEKKEKTAFDVKLEKFDGASKIKVIKEVNSFTNLGLKEAKDLVEKVPAILKQGVTKEEATDIIEKIKAAGGIAVME

TrEMBL top hitse value%identityAlignment
A0A0A0L907 Ribosomal_L12 domain-containing protein1.9e-3090.59Show/hide
Query:  GAAAGSSKAEEKKEKTAFDVKLEKFDGASKIKVIKEVNSFTNLGLKEAKDLVEKVPAILKQGVTKEEATDIIEKIKAAGGIAVME
        GAAAGSS  EEKKEKTAFDVKLEKFD ASKIKVIKEV +FTNLGLKEAKDLVEKVPAILKQGVTKEEA  IIEKIKAAGG+AVME
Subjt:  GAAAGSSKAEEKKEKTAFDVKLEKFDGASKIKVIKEVNSFTNLGLKEAKDLVEKVPAILKQGVTKEEATDIIEKIKAAGGIAVME

A0A1S3BPI3 50S ribosomal protein L7/L121.9e-3090.59Show/hide
Query:  GAAAGSSKAEEKKEKTAFDVKLEKFDGASKIKVIKEVNSFTNLGLKEAKDLVEKVPAILKQGVTKEEATDIIEKIKAAGGIAVME
        GAAAGSS  EEKKEKTAFDVKLEKFD ASKIKVIKEV +FTNLGLKEAKDLVEKVPAILKQGVTKEEA  IIEKIKAAGG+AVME
Subjt:  GAAAGSSKAEEKKEKTAFDVKLEKFDGASKIKVIKEVNSFTNLGLKEAKDLVEKVPAILKQGVTKEEATDIIEKIKAAGGIAVME

A0A5A7SU77 50S ribosomal protein L7/L121.9e-4689.26Show/hide
Query:  MSVARSVRHSPKDLDILSCSQFQWMAWTWVLK---EGAAAGSSKAEEKKEKTAFDVKLEKFDGASKIKVIKEVNSFTNLGLKEAKDLVEKVPAILKQGVT
        MSVARSVRHS KDLDILS SQFQWMAWT V K    GAAAGSSKAEEK+EKTAFDVKLEKFD ASKIKVIKEV SFTNLGLKEAKDLVEKVPAILKQGVT
Subjt:  MSVARSVRHSPKDLDILSCSQFQWMAWTWVLK---EGAAAGSSKAEEKKEKTAFDVKLEKFDGASKIKVIKEVNSFTNLGLKEAKDLVEKVPAILKQGVT

Query:  KEEATDIIEKIKAAGGIAVME
        KEEA DIIEKIKAAGG+AVME
Subjt:  KEEATDIIEKIKAAGGIAVME

A0A5A7U2A3 50S ribosomal protein L7/L121.9e-3090.59Show/hide
Query:  GAAAGSSKAEEKKEKTAFDVKLEKFDGASKIKVIKEVNSFTNLGLKEAKDLVEKVPAILKQGVTKEEATDIIEKIKAAGGIAVME
        GAAAGSS  EEKKEKTAFDVKLEKFD ASKIKVIKEV +FTNLGLKEAKDLVEKVPAILKQGVTKEEA  IIEKIKAAGG+AVME
Subjt:  GAAAGSSKAEEKKEKTAFDVKLEKFDGASKIKVIKEVNSFTNLGLKEAKDLVEKVPAILKQGVTKEEATDIIEKIKAAGGIAVME

A0A6J1DM08 uncharacterized protein LOC1110222072.3e-3191.76Show/hide
Query:  GAAAGSSKAEEKKEKTAFDVKLEKFDGASKIKVIKEVNSFTNLGLKEAKDLVEKVPAILKQGVTKEEATDIIEKIKAAGGIAVME
        GA AGSSK EEKKEKTAFDVKLEKFD A+KIKVIKEV SFTNLGLKEAKDLVEKVPAILKQGVTKEEA DIIEKIKAAGG+AVME
Subjt:  GAAAGSSKAEEKKEKTAFDVKLEKFDGASKIKVIKEVNSFTNLGLKEAKDLVEKVPAILKQGVTKEEATDIIEKIKAAGGIAVME

SwissProt top hitse value%identityAlignment
A2C031 50S ribosomal protein L7/L122.4e-1455Show/hide
Query:  GAAAGSSKAEEKKEKTAFDVKLEKFDGASKIKVIKEVNSFTNLGLKEAKDLVEKVPAILKQGVTKEEATDIIEKIKAAGG
        GAAAG   A+  +EKT F+V LE FD +SKIKV+KEV + T LGL EAK LVE  P  +K+G TKE+A  + + I+A GG
Subjt:  GAAAGSSKAEEKKEKTAFDVKLEKFDGASKIKVIKEVNSFTNLGLKEAKDLVEKVPAILKQGVTKEEATDIIEKIKAAGG

A5GWJ9 50S ribosomal protein L7/L123.5e-1356.25Show/hide
Query:  GAAAGSSKAEEKKEKTAFDVKLEKFDGASKIKVIKEVNSFTNLGLKEAKDLVEKVPAILKQGVTKEEATDIIEKIKAAGG
        GAAAG  +A E  EKT FDV LE FD A+KIKV+K V   T LGL +AK LVEK P  +K+GV K  A D+ + I+ AGG
Subjt:  GAAAGSSKAEEKKEKTAFDVKLEKFDGASKIKVIKEVNSFTNLGLKEAKDLVEKVPAILKQGVTKEEATDIIEKIKAAGG

P41189 50S ribosomal protein L7/L124.5e-1350.6Show/hide
Query:  AAAGSSKAEEKKEKTAFDVKLEKFDGASKIKVIKEVNSFTNLGLKEAKDLVEKVPAILKQGVTKEEATDIIEKIKAAGGIAVM
        A+A    A    EKT F+V LE FD   KI VIKEV + T LGLKEAKD VE  P  LK GV+K+EA ++ +K++AAG   ++
Subjt:  AAAGSSKAEEKKEKTAFDVKLEKFDGASKIKVIKEVNSFTNLGLKEAKDLVEKVPAILKQGVTKEEATDIIEKIKAAGGIAVM

Q2K9M5 50S ribosomal protein L7/L124.5e-1356.1Show/hide
Query:  GAAAGSSKAEEKKEKTAFDVKLEKFDGASKIKVIKEVNSFTNLGLKEAKDLVEKVPAILKQGVTKEEATDIIEKIKAAGGIA
        G AAG + A  ++EKT FDV L    GA+KI VIKEV + T LGLKEAKDLVE  P  +K+GV+K EA DI +K++ AG  A
Subjt:  GAAAGSSKAEEKKEKTAFDVKLEKFDGASKIKVIKEVNSFTNLGLKEAKDLVEKVPAILKQGVTKEEATDIIEKIKAAGGIA

Q46HH2 50S ribosomal protein L7/L127.0e-1453.75Show/hide
Query:  GAAAGSSKAEEKKEKTAFDVKLEKFDGASKIKVIKEVNSFTNLGLKEAKDLVEKVPAILKQGVTKEEATDIIEKIKAAGG
        GAAAG   A+  +EKT F+V LE F+ +SKIKV+KEV + T LGL EAK LVE  P  +K+G TKE+A  + + I+A GG
Subjt:  GAAAGSSKAEEKKEKTAFDVKLEKFDGASKIKVIKEVNSFTNLGLKEAKDLVEKVPAILKQGVTKEEATDIIEKIKAAGG

Arabidopsis top hitse value%identityAlignment
AT3G06040.1 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein3.9e-2880.25Show/hide
Query:  GSSKAEEKKEKTAFDVKLEKFDGASKIKVIKEVNSFTNLGLKEAKDLVEKVPAILKQGVTKEEATDIIEKIKAAGGIAVME
        G+   EEKKEKTAFDVKLEKF+ + KIKVIKEV +FT+LGLKEAK+LVEKVPAILKQGVTKEEA +II KIKA GGIAVME
Subjt:  GSSKAEEKKEKTAFDVKLEKFDGASKIKVIKEVNSFTNLGLKEAKDLVEKVPAILKQGVTKEEATDIIEKIKAAGGIAVME

AT3G06040.2 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein3.9e-2880.25Show/hide
Query:  GSSKAEEKKEKTAFDVKLEKFDGASKIKVIKEVNSFTNLGLKEAKDLVEKVPAILKQGVTKEEATDIIEKIKAAGGIAVME
        G+   EEKKEKTAFDVKLEKF+ + KIKVIKEV +FT+LGLKEAK+LVEKVPAILKQGVTKEEA +II KIKA GGIAVME
Subjt:  GSSKAEEKKEKTAFDVKLEKFDGASKIKVIKEVNSFTNLGLKEAKDLVEKVPAILKQGVTKEEATDIIEKIKAAGGIAVME

AT3G06040.3 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein3.9e-2880.25Show/hide
Query:  GSSKAEEKKEKTAFDVKLEKFDGASKIKVIKEVNSFTNLGLKEAKDLVEKVPAILKQGVTKEEATDIIEKIKAAGGIAVME
        G+   EEKKEKTAFDVKLEKF+ + KIKVIKEV +FT+LGLKEAK+LVEKVPAILKQGVTKEEA +II KIKA GGIAVME
Subjt:  GSSKAEEKKEKTAFDVKLEKFDGASKIKVIKEVNSFTNLGLKEAKDLVEKVPAILKQGVTKEEATDIIEKIKAAGGIAVME

AT4G36420.1 Ribosomal protein L12 family protein1.0e-2061.9Show/hide
Query:  AAAGSSKAEEKKEKTAFDVKLEKFDGASKIKVIKEVNSFTNLGLKEAKDLVEKVPAILKQGVTKEEATDIIEKIKAAGGIAVME
        +A G  K ++K+ KTAFDV L+ +D  SKIKVIKEV + T LGLKEAKDLVEK P +LK+GV+KEEA  IIEK+KA G    ME
Subjt:  AAAGSSKAEEKKEKTAFDVKLEKFDGASKIKVIKEVNSFTNLGLKEAKDLVEKVPAILKQGVTKEEATDIIEKIKAAGGIAVME

AT4G37660.1 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein4.7e-2162.07Show/hide
Query:  GAAAGSSKAEEKK--EKTAFDVKLEKFDGASKIKVIKEVNSFTNLGLKEAKDLVEKVPAILKQGVTKEEATDIIEKIKAAGGIAVME
        G+   +S + E K  EKT FDVKLEKF+ ASKIKVIKE+ +FT+LGLKEAK LVEK P I+K G+TKEEA  I+EK+KA G I  +E
Subjt:  GAAAGSSKAEEKK--EKTAFDVKLEKFDGASKIKVIKEVNSFTNLGLKEAKDLVEKVPAILKQGVTKEEATDIIEKIKAAGGIAVME


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGTTGCCAGATCAGTCCGACACTCACCGAAAGACTTAGACATTCTAAGTTGCAGCCAATTTCAGTGGATGGCTTGGACATGGGTACTGAAGGAGGGGGCGGCTGC
AGGATCGTCCAAGGCAGAGGAGAAGAAAGAAAAAACCGCATTCGATGTGAAGTTAGAGAAGTTTGATGGTGCTTCAAAAATTAAGGTGATTAAAGAAGTAAATTCTTTCA
CTAATCTGGGTCTAAAGGAGGCAAAAGATTTGGTTGAGAAAGTGCCTGCAATTCTTAAACAAGGGGTGACCAAGGAAGAAGCAACTGACATCATTGAAAAAATCAAAGCT
GCTGGAGGAATTGCTGTGATGGAATAG
mRNA sequenceShow/hide mRNA sequence
GTAAAAATGAGTTTTTTTTTATATTTTAGGACAGTTTTGCAAATTTACCGTCAAACACCCGCCAACCCACGTTCCTCAGCCTTCCTCTCCGGCGACCCGCCAGCAACCAC
AGGCGTAAAGCAGCGACGAGTGGAAGAACGCCTAGCTCTGTACGGAGCATCGTTTCTACTTTGTTTAAGACTCCAACGTGAACAACAAGTTGTGCATCTAGTTTTCCACG
ACAGGGTGTCTTGCAGCAGCATTTTTGACTTGGGGGAGTAAGCTTTCGGCCGTTACCCACACTCTGATTGGCTTCAAATTCGTGTTCACATAACGTTTAAGGTATATTTG
CAAGTTCGGACGTTATAGGACACCAACCAGCAAGGATTGGAGCCTTTTTTGGTTTTTTGTTCCATGTTGCAATAATTCTCACTGACAATGAATTGAAGAAATAATGAAGC
TGGCTATGGTTGCAAGATCCCTTTGAGTCCATTCCACACCCACCAAAATAATTGGGTTGTCGCAGGTTCGCTTTTCTCAGCCAGATTTTACTCCCAGAGATCCAAATACC
AAGCCAAAACTATACAAATATCCACCATTTGATGATCCATATGGCCCTAAGCCTTCACCCTCAGATAAAATCATTGAACTTGCTGAAAGAATTGTAACACTGCCTCCCAA
TGAGCGTTGCCAGATCAGTCCGACACTCACCGAAAGACTTAGACATTCTAAGTTGCAGCCAATTTCAGTGGATGGCTTGGACATGGGTACTGAAGGAGGGGGCGGCTGCA
GGATCGTCCAAGGCAGAGGAGAAGAAAGAAAAAACCGCATTCGATGTGAAGTTAGAGAAGTTTGATGGTGCTTCAAAAATTAAGGTGATTAAAGAAGTAAATTCTTTCAC
TAATCTGGGTCTAAAGGAGGCAAAAGATTTGGTTGAGAAAGTGCCTGCAATTCTTAAACAAGGGGTGACCAAGGAAGAAGCAACTGACATCATTGAAAAAATCAAAGCTG
CTGGAGGAATTGCTGTGATGGAATAGTAAAATTTTGTTCTAAAGTTAGTATTGACTTTTTGTTTATATATATTTTTTCCAGCTGTGCAATTCCTAGCTTCAATCAATCAT
TGAATAGTGAATATTCTTCA
Protein sequenceShow/hide protein sequence
MSVARSVRHSPKDLDILSCSQFQWMAWTWVLKEGAAAGSSKAEEKKEKTAFDVKLEKFDGASKIKVIKEVNSFTNLGLKEAKDLVEKVPAILKQGVTKEEATDIIEKIKA
AGGIAVME