; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0013067 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013067
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr05:12884735..12886388
RNA-Seq ExpressionPI0013067
SyntenyPI0013067
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039097.1 uncharacterized protein E6C27_scaffold84G001970 [Cucumis melo var. makuwa]1.5e-3166.37Show/hide
Query:  VEVPDVVRFLETQIQEISEKVDAIDAITDRLDGLPISELLTRVDTLEAKAARTEDFRAALDVVRNEIADVSTRVNLTMQAMANQAPAGGAMQVNRVKILE
        VEV D +RFLE++++E+ EK DAIDA+  R+ GLPI ELL RVDTLE     +EDF A LDVVRNEI DV+TR+N TM+AM N APAGGA+ V++VKIL+
Subjt:  VEVPDVVRFLETQIQEISEKVDAIDAITDRLDGLPISELLTRVDTLEAKAARTEDFRAALDVVRNEIADVSTRVNLTMQAMANQAPAGGAMQVNRVKILE

Query:  PKPFCGARDAKTL
        PKPFCGARDAK L
Subjt:  PKPFCGARDAKTL

KAA0046343.1 uncharacterized protein E6C27_scaffold149G00520 [Cucumis melo var. makuwa]5.8e-3147.75Show/hide
Query:  QPLHQVEVPDVVRFLETQIQEISEKVDAIDAITDRLDGLPISELLTRVDTLEAKAART--------------------------------------EDFR
        Q L+  EVPD +RFLE++++EI+EK D ID +  R++GLPI ELL RV+TLE    RT                                      EDFR
Subjt:  QPLHQVEVPDVVRFLETQIQEISEKVDAIDAITDRLDGLPISELLTRVDTLEAKAART--------------------------------------EDFR

Query:  AALDVVRNEIADVSTRVNLTMQAMANQAPAGGAMQVNRVKILEPKPFCGARDAKTLATTYLISNNTSGPQTQLQKKRK
        A LDVVRNEIADV+ R+N+T++A+ANQAPAGGA+ V RVKILEPKPFCG    +   T +L  ++TS PQT L KK K
Subjt:  AALDVVRNEIADVSTRVNLTMQAMANQAPAGGAMQVNRVKILEPKPFCGARDAKTLATTYLISNNTSGPQTQLQKKRK

KAA0047380.1 uncharacterized protein E6C27_scaffold754G00350 [Cucumis melo var. makuwa]1.3e-3049.44Show/hide
Query:  QPLHQVEVPDVVRFLETQIQEISEKVDAIDAITDRLDGLPISELLTRVDTLE--AKAART--------------------------------------ED
        Q L+ VEVPD +R+LE+++ EISEK D IDA+   ++ LPI ELL RVD LE    A RT                                      ED
Subjt:  QPLHQVEVPDVVRFLETQIQEISEKVDAIDAITDRLDGLPISELLTRVDTLE--AKAART--------------------------------------ED

Query:  FRAALDVVRNEIADVSTRVNLTMQAMANQAPAGGAMQVNRVKILEPKPFCGARDAKTLATTYLISNNTSGPQTQLQKKRK
        FR  LDVVRNEIADV+ R++LTM+AMANQAPAGGA+ VN+VK++EPKPFCG RDAK LA T+   N+TS  QT   KK K
Subjt:  FRAALDVVRNEIADVSTRVNLTMQAMANQAPAGGAMQVNRVKILEPKPFCGARDAKTLATTYLISNNTSGPQTQLQKKRK

KAA0066681.1 uncharacterized protein E6C27_scaffold271G00090 [Cucumis melo var. makuwa]9.9e-3149.42Show/hide
Query:  LHQVEVPDVVRFLETQIQEISEKVDAIDAITDRLDGLPISELLTRVDTLEAKAART--------------------------------------EDFRAA
        L+ VEVPD +RFLE++++EI+EK D IDA+  R++GLPI ELL RVDTLE    RT                                      EDFRA 
Subjt:  LHQVEVPDVVRFLETQIQEISEKVDAIDAITDRLDGLPISELLTRVDTLEAKAART--------------------------------------EDFRAA

Query:  LDVVRNEIADVSTRVNLTMQAMANQAPAGGAMQVNRVKILEPKPFCGARDAKTLAT------TYLISNNTSG
        LDV+RNEIA V+ R++LTM+AMANQAPAGGA+ V+RVKILEPKPFCG RDAK L         Y  + NT G
Subjt:  LDVVRNEIADVSTRVNLTMQAMANQAPAGGAMQVNRVKILEPKPFCGARDAKTLAT------TYLISNNTSG

TYK23878.1 uncharacterized protein E5676_scaffold419G00550 [Cucumis melo var. makuwa]4.5e-3156.33Show/hide
Query:  QPLHQVEVPDVVRFLETQIQEISEKVDAIDAITDRLDGLPISELLTRVDTLEAKAART--------------------------------------EDFR
        Q L+ VEVPD V FLET  QE SEK+DAIDA+TDRLDGLPI ELLTR+DTLE K  RT                                      EDF 
Subjt:  QPLHQVEVPDVVRFLETQIQEISEKVDAIDAITDRLDGLPISELLTRVDTLEAKAART--------------------------------------EDFR

Query:  AALDVVRNEIADVSTRVNLTMQ--AMANQAPAGGAMQVNRVKILEPKPFCGARDAKTL
        AAL+VVRNEIA+VSTRVNLTM    MANQAPA GA+ V+R+KI EP PFCG RDAK L
Subjt:  AALDVVRNEIADVSTRVNLTMQ--AMANQAPAGGAMQVNRVKILEPKPFCGARDAKTL

TrEMBL top hitse value%identityAlignment
A0A5A7TBY4 Uncharacterized protein7.4e-3266.37Show/hide
Query:  VEVPDVVRFLETQIQEISEKVDAIDAITDRLDGLPISELLTRVDTLEAKAARTEDFRAALDVVRNEIADVSTRVNLTMQAMANQAPAGGAMQVNRVKILE
        VEV D +RFLE++++E+ EK DAIDA+  R+ GLPI ELL RVDTLE     +EDF A LDVVRNEI DV+TR+N TM+AM N APAGGA+ V++VKIL+
Subjt:  VEVPDVVRFLETQIQEISEKVDAIDAITDRLDGLPISELLTRVDTLEAKAARTEDFRAALDVVRNEIADVSTRVNLTMQAMANQAPAGGAMQVNRVKILE

Query:  PKPFCGARDAKTL
        PKPFCGARDAK L
Subjt:  PKPFCGARDAKTL

A0A5D3CQ56 Uncharacterized protein6.3e-3149.44Show/hide
Query:  QPLHQVEVPDVVRFLETQIQEISEKVDAIDAITDRLDGLPISELLTRVDTLE--AKAART--------------------------------------ED
        Q L+ VEVPD +R+LE+++ EISEK D IDA+   ++ LPI ELL RVD LE    A RT                                      ED
Subjt:  QPLHQVEVPDVVRFLETQIQEISEKVDAIDAITDRLDGLPISELLTRVDTLE--AKAART--------------------------------------ED

Query:  FRAALDVVRNEIADVSTRVNLTMQAMANQAPAGGAMQVNRVKILEPKPFCGARDAKTLATTYLISNNTSGPQTQLQKKRK
        FR  LDVVRNEIADV+ R++LTM+AMANQAPAGGA+ VN+VK++EPKPFCG RDAK LA T+   N+TS  QT   KK K
Subjt:  FRAALDVVRNEIADVSTRVNLTMQAMANQAPAGGAMQVNRVKILEPKPFCGARDAKTLATTYLISNNTSGPQTQLQKKRK

A0A5D3DK41 Uncharacterized protein2.2e-3156.33Show/hide
Query:  QPLHQVEVPDVVRFLETQIQEISEKVDAIDAITDRLDGLPISELLTRVDTLEAKAART--------------------------------------EDFR
        Q L+ VEVPD V FLET  QE SEK+DAIDA+TDRLDGLPI ELLTR+DTLE K  RT                                      EDF 
Subjt:  QPLHQVEVPDVVRFLETQIQEISEKVDAIDAITDRLDGLPISELLTRVDTLEAKAART--------------------------------------EDFR

Query:  AALDVVRNEIADVSTRVNLTMQ--AMANQAPAGGAMQVNRVKILEPKPFCGARDAKTL
        AAL+VVRNEIA+VSTRVNLTM    MANQAPA GA+ V+R+KI EP PFCG RDAK L
Subjt:  AALDVVRNEIADVSTRVNLTMQ--AMANQAPAGGAMQVNRVKILEPKPFCGARDAKTL

A0A5D3DVV7 Retrotrans_gag domain-containing protein4.8e-3149.42Show/hide
Query:  LHQVEVPDVVRFLETQIQEISEKVDAIDAITDRLDGLPISELLTRVDTLEAKAART--------------------------------------EDFRAA
        L+ VEVPD +RFLE++++EI+EK D IDA+  R++GLPI ELL RVDTLE    RT                                      EDFRA 
Subjt:  LHQVEVPDVVRFLETQIQEISEKVDAIDAITDRLDGLPISELLTRVDTLEAKAART--------------------------------------EDFRAA

Query:  LDVVRNEIADVSTRVNLTMQAMANQAPAGGAMQVNRVKILEPKPFCGARDAKTLAT------TYLISNNTSG
        LDV+RNEIA V+ R++LTM+AMANQAPAGGA+ V+RVKILEPKPFCG RDAK L         Y  + NT G
Subjt:  LDVVRNEIADVSTRVNLTMQAMANQAPAGGAMQVNRVKILEPKPFCGARDAKTLAT------TYLISNNTSG

A0A5D3E355 Uncharacterized protein2.8e-3147.75Show/hide
Query:  QPLHQVEVPDVVRFLETQIQEISEKVDAIDAITDRLDGLPISELLTRVDTLEAKAART--------------------------------------EDFR
        Q L+  EVPD +RFLE++++EI+EK D ID +  R++GLPI ELL RV+TLE    RT                                      EDFR
Subjt:  QPLHQVEVPDVVRFLETQIQEISEKVDAIDAITDRLDGLPISELLTRVDTLEAKAART--------------------------------------EDFR

Query:  AALDVVRNEIADVSTRVNLTMQAMANQAPAGGAMQVNRVKILEPKPFCGARDAKTLATTYLISNNTSGPQTQLQKKRK
        A LDVVRNEIADV+ R+N+T++A+ANQAPAGGA+ V RVKILEPKPFCG    +   T +L  ++TS PQT L KK K
Subjt:  AALDVVRNEIADVSTRVNLTMQAMANQAPAGGAMQVNRVKILEPKPFCGARDAKTLATTYLISNNTSGPQTQLQKKRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCCACTTCTTCTCGCTCGAGATGGAGAATCAAAGATCATTAACGAGATTCTTTCTATAAGCTTTGCTACTGAAACAGAGAAGTCAGTTGCCTCCTTCGAGCACCA
AGGACCTTCAAGCTGCGGGGCTGGGGTCGAATTGATGTACCCACATATTCAACCTCTACATCAAGTGGAAGTTCCGGACGTCGTCCGCTTCTTGGAAACCCAAATTCAAG
AAATTTCCGAGAAAGTCGACGCTATTGATGCGATAACCGATCGCCTCGATGGATTACCTATAAGTGAGCTGTTGACAAGAGTTGACACTCTAGAGGCAAAAGCTGCAAGA
ACTGAGGATTTTCGTGCTGCTCTTGACGTCGTCAGGAATGAGATCGCTGACGTGAGCACGAGGGTGAACCTCACGATGCAAGCCATGGCAAACCAAGCTCCAGCTGGAGG
AGCAATGCAAGTTAACAGAGTGAAGATCCTCGAACCCAAACCCTTCTGTGGGGCAAGGGATGCAAAAACCTTGGCGACTACATATTTGATCTCAAACAATACTTCTGGGC
CACAAACACAGTTACAGAAGAAGCGAAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTCCACTTCTTCTCGCTCGAGATGGAGAATCAAAGATCATTAACGAGATTCTTTCTATAAGCTTTGCTACTGAAACAGAGAAGTCAGTTGCCTCCTTCGAGCACCA
AGGACCTTCAAGCTGCGGGGCTGGGGTCGAATTGATGTACCCACATATTCAACCTCTACATCAAGTGGAAGTTCCGGACGTCGTCCGCTTCTTGGAAACCCAAATTCAAG
AAATTTCCGAGAAAGTCGACGCTATTGATGCGATAACCGATCGCCTCGATGGATTACCTATAAGTGAGCTGTTGACAAGAGTTGACACTCTAGAGGCAAAAGCTGCAAGA
ACTGAGGATTTTCGTGCTGCTCTTGACGTCGTCAGGAATGAGATCGCTGACGTGAGCACGAGGGTGAACCTCACGATGCAAGCCATGGCAAACCAAGCTCCAGCTGGAGG
AGCAATGCAAGTTAACAGAGTGAAGATCCTCGAACCCAAACCCTTCTGTGGGGCAAGGGATGCAAAAACCTTGGCGACTACATATTTGATCTCAAACAATACTTCTGGGC
CACAAACACAGTTACAGAAGAAGCGAAAGTGA
Protein sequenceShow/hide protein sequence
MLPLLLARDGESKIINEILSISFATETEKSVASFEHQGPSSCGAGVELMYPHIQPLHQVEVPDVVRFLETQIQEISEKVDAIDAITDRLDGLPISELLTRVDTLEAKAAR
TEDFRAALDVVRNEIADVSTRVNLTMQAMANQAPAGGAMQVNRVKILEPKPFCGARDAKTLATTYLISNNTSGPQTQLQKKRK