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PI0013070 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013070
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr02:14198278..14198871
RNA-Seq ExpressionPI0013070
SyntenyPI0013070
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043564.1 retrotransposon protein [Cucumis melo var. makuwa]4.1e-0567.74Show/hide
Query:  MKGPSCSDFGWNEEYQCIIVEWEIFDSWVKA
        M+GPSCS FGWNE++QCII E ++FD+WVK+
Subjt:  MKGPSCSDFGWNEEYQCIIVEWEIFDSWVKA

KAA0059919.1 retrotransposon protein [Cucumis melo var. makuwa]9.0e-0550Show/hide
Query:  MKGPSCSDFGWNEEYQCIIVEWEIFDSWVKAFYRLWEHVQRP
        ++GP+CSDFGWN+E +CII E E+FD+WV++     E + +P
Subjt:  MKGPSCSDFGWNEEYQCIIVEWEIFDSWVKAFYRLWEHVQRP

KAA0062747.1 retrotransposon protein [Cucumis melo var. makuwa]1.8e-0833.94Show/hide
Query:  MKGPSCSDFGWNEEYQCIIVEWEIFDSWVKA-------------FYRLWEHVQRPLLMSGLMCQTILMM----------VFPL-----------------
        M+GPSCS FGWNEE+QCII E ++FDSWVK+             +Y    +V      +G   +T + +            PL                 
Subjt:  MKGPSCSDFGWNEEYQCIIVEWEIFDSWVKA-------------FYRLWEHVQRPLLMSGLMCQTILMM----------VFPL-----------------

Query:  -----MLGTRA----------GDQVKEEMD-RVEARGNKVKLRAEVMKQLQDIPELRSRKRVKLM
             M G RA           +Q+K   D   E R  ++++RA+V+KQLQDIPELRS+ R KLM
Subjt:  -----MLGTRA----------GDQVKEEMD-RVEARGNKVKLRAEVMKQLQDIPELRSRKRVKLM

KGN66636.1 hypothetical protein Csa_007482 [Cucumis sativus]8.7e-2456.25Show/hide
Query:  MKGPSCSDFGWNEEYQCIIVEWEIFDSWVK------AFYRLWEHVQRPLLMSGLMCQTILMMVFPLMLGTRAGDQVKEEMDRVEARGN------------
        M+GPSCS FGWNEEYQCI+ E E+FDSWVK          + EH QR LLM   MCQTILM VFPL+      DQVKEE+  VE +GN            
Subjt:  MKGPSCSDFGWNEEYQCIIVEWEIFDSWVK------AFYRLWEHVQRPLLMSGLMCQTILMMVFPLMLGTRAGDQVKEEMDRVEARGN------------

Query:  -KVKLRAEVMKQLQDIPELRSRKRVKLM
         KV+L  EV+KQLQDIPEL++R RVKLM
Subjt:  -KVKLRAEVMKQLQDIPELRSRKRVKLM

XP_008441954.1 PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo]1.8e-0529.47Show/hide
Query:  MKGPSCSDFGWNEEYQCIIVEWEIFDSWVKA-------------FYRLWEHVQRPLLMSGLMCQT----------ILMMVFPL-----------------
        M+GPSCS FGWNEE+QCII E ++FDSW+K+             +Y    +V      +G   +T          +     PL                 
Subjt:  MKGPSCSDFGWNEEYQCIIVEWEIFDSWVKA-------------FYRLWEHVQRPLLMSGLMCQT----------ILMMVFPL-----------------

Query:  -----MLGTRAG-----------------------------------DQVKEEMD-RVEARGNKVKLRAEVMKQLQDIPELRSRKRVKLM
             M G RAG                                   +Q+K   D   E R  +V++RA+V+KQLQDIP+LRS+ R KLM
Subjt:  -----MLGTRAG-----------------------------------DQVKEEMD-RVEARGNKVKLRAEVMKQLQDIPELRSRKRVKLM

TrEMBL top hitse value%identityAlignment
A0A0A0M343 Uncharacterized protein4.2e-2456.25Show/hide
Query:  MKGPSCSDFGWNEEYQCIIVEWEIFDSWVK------AFYRLWEHVQRPLLMSGLMCQTILMMVFPLMLGTRAGDQVKEEMDRVEARGN------------
        M+GPSCS FGWNEEYQCI+ E E+FDSWVK          + EH QR LLM   MCQTILM VFPL+      DQVKEE+  VE +GN            
Subjt:  MKGPSCSDFGWNEEYQCIIVEWEIFDSWVK------AFYRLWEHVQRPLLMSGLMCQTILMMVFPLMLGTRAGDQVKEEMDRVEARGN------------

Query:  -KVKLRAEVMKQLQDIPELRSRKRVKLM
         KV+L  EV+KQLQDIPEL++R RVKLM
Subjt:  -KVKLRAEVMKQLQDIPELRSRKRVKLM

A0A1S3B4L3 uncharacterized protein LOC1034859538.8e-0629.47Show/hide
Query:  MKGPSCSDFGWNEEYQCIIVEWEIFDSWVKA-------------FYRLWEHVQRPLLMSGLMCQT----------ILMMVFPL-----------------
        M+GPSCS FGWNEE+QCII E ++FDSW+K+             +Y    +V      +G   +T          +     PL                 
Subjt:  MKGPSCSDFGWNEEYQCIIVEWEIFDSWVKA-------------FYRLWEHVQRPLLMSGLMCQT----------ILMMVFPL-----------------

Query:  -----MLGTRAG-----------------------------------DQVKEEMD-RVEARGNKVKLRAEVMKQLQDIPELRSRKRVKLM
             M G RAG                                   +Q+K   D   E R  +V++RA+V+KQLQDIP+LRS+ R KLM
Subjt:  -----MLGTRAG-----------------------------------DQVKEEMD-RVEARGNKVKLRAEVMKQLQDIPELRSRKRVKLM

A0A5A7TJS2 Retrotransposon protein2.0e-0567.74Show/hide
Query:  MKGPSCSDFGWNEEYQCIIVEWEIFDSWVKA
        M+GPSCS FGWNE++QCII E ++FD+WVK+
Subjt:  MKGPSCSDFGWNEEYQCIIVEWEIFDSWVKA

A0A5A7U0H7 Retrotransposon protein8.8e-0629.47Show/hide
Query:  MKGPSCSDFGWNEEYQCIIVEWEIFDSWVKA-------------FYRLWEHVQRPLLMSGLMCQT----------ILMMVFPL-----------------
        M+GPSCS FGWNEE+QCII E ++FDSW+K+             +Y    +V      +G   +T          +     PL                 
Subjt:  MKGPSCSDFGWNEEYQCIIVEWEIFDSWVKA-------------FYRLWEHVQRPLLMSGLMCQT----------ILMMVFPL-----------------

Query:  -----MLGTRAG-----------------------------------DQVKEEMD-RVEARGNKVKLRAEVMKQLQDIPELRSRKRVKLM
             M G RAG                                   +Q+K   D   E R  +V++RA+V+KQLQDIP+LRS+ R KLM
Subjt:  -----MLGTRAG-----------------------------------DQVKEEMD-RVEARGNKVKLRAEVMKQLQDIPELRSRKRVKLM

A0A5D3DG22 Retrotransposon protein8.5e-0933.94Show/hide
Query:  MKGPSCSDFGWNEEYQCIIVEWEIFDSWVKA-------------FYRLWEHVQRPLLMSGLMCQTILMM----------VFPL-----------------
        M+GPSCS FGWNEE+QCII E ++FDSWVK+             +Y    +V      +G   +T + +            PL                 
Subjt:  MKGPSCSDFGWNEEYQCIIVEWEIFDSWVKA-------------FYRLWEHVQRPLLMSGLMCQTILMM----------VFPL-----------------

Query:  -----MLGTRA----------GDQVKEEMD-RVEARGNKVKLRAEVMKQLQDIPELRSRKRVKLM
             M G RA           +Q+K   D   E R  ++++RA+V+KQLQDIPELRS+ R KLM
Subjt:  -----MLGTRA----------GDQVKEEMD-RVEARGNKVKLRAEVMKQLQDIPELRSRKRVKLM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGGGCCATCGTGTAGCGACTTTGGATGGAACGAAGAATATCAATGCATCATCGTAGAATGGGAGATATTCGATAGTTGGGTCAAGGCCTTCTATAGGCTATGGGA
GCACGTTCAGAGACCTTTACTGATGTCAGGTCTAATGTGCCAAACCATTTTAATGATGGTGTTCCCCTTGATGTTAGGAACACGTGCAGGTGATCAAGTGAAGGAAGAAA
TGGATCGAGTGGAAGCAAGAGGAAACAAGGTCAAATTGCGTGCAGAAGTCATGAAACAGCTACAAGATATCCCTGAACTACGGAGCCGAAAGAGGGTAAAGCTTATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGGGCCATCGTGTAGCGACTTTGGATGGAACGAAGAATATCAATGCATCATCGTAGAATGGGAGATATTCGATAGTTGGGTCAAGGCCTTCTATAGGCTATGGGA
GCACGTTCAGAGACCTTTACTGATGTCAGGTCTAATGTGCCAAACCATTTTAATGATGGTGTTCCCCTTGATGTTAGGAACACGTGCAGGTGATCAAGTGAAGGAAGAAA
TGGATCGAGTGGAAGCAAGAGGAAACAAGGTCAAATTGCGTGCAGAAGTCATGAAACAGCTACAAGATATCCCTGAACTACGGAGCCGAAAGAGGGTAAAGCTTATGTGA
Protein sequenceShow/hide protein sequence
MKGPSCSDFGWNEEYQCIIVEWEIFDSWVKAFYRLWEHVQRPLLMSGLMCQTILMMVFPLMLGTRAGDQVKEEMDRVEARGNKVKLRAEVMKQLQDIPELRSRKRVKLM