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PI0013071 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013071
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionsmall EDRK-rich factor 2
Genome locationchr05:16441781..16442865
RNA-Seq ExpressionPI0013071
SyntenyPI0013071
Gene Ontology termsNA
InterPro domainsIPR007513 - Uncharacterised protein family SERF, N-terminal
IPR040211 - Small EDRK-rich factor 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033303.1 small EDRK-rich factor 2 [Cucumis melo var. makuwa]1.2e-2096.97Show/hide
Query:  RGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKPSTKK
        RGNQREKDRERAQARNGGKGK KDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGK STKK
Subjt:  RGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKPSTKK
TYK21602.1 small EDRK-rich factor 2 [Cucumis melo var. makuwa]1.2e-2096.97Show/hide
Query:  RGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKPSTKK
        RGNQREKDRERAQARNGGKGK KDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGK STKK
Subjt:  RGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKPSTKK
XP_004138960.1 small EDRK-rich factor 2 [Cucumis sativus]1.0e-2297.06Show/hide
Query:  MTRGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKPSTKK
        MTRGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEK AKKAAQA SGGNSSGGKPSTKK
Subjt:  MTRGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKPSTKK
XP_008457241.1 PREDICTED: small EDRK-rich factor 2 [Cucumis melo]5.1e-2297.06Show/hide
Query:  MTRGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKPSTKK
        MTRGNQREKDRERAQARNGGKGK KDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGK STKK
Subjt:  MTRGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKPSTKK
XP_038876165.1 small EDRK-rich factor 2 [Benincasa hispida]5.6e-2194.12Show/hide
Query:  MTRGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKPSTKK
        MTRGNQREKDRER+QARN GKGK KDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGK STKK
Subjt:  MTRGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKPSTKK
TrEMBL top hitse value%identityAlignment
A0A0A0LHU5 4F5 domain-containing protein4.9e-2397.06Show/hide
Query:  MTRGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKPSTKK
        MTRGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEK AKKAAQA SGGNSSGGKPSTKK
Subjt:  MTRGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKPSTKK
A0A1S3C551 small EDRK-rich factor 22.5e-2297.06Show/hide
Query:  MTRGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKPSTKK
        MTRGNQREKDRERAQARNGGKGK KDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGK STKK
Subjt:  MTRGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKPSTKK
A0A5A7SS85 Small EDRK-rich factor 26.0e-2196.97Show/hide
Query:  RGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKPSTKK
        RGNQREKDRERAQARNGGKGK KDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGK STKK
Subjt:  RGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKPSTKK
A0A5D3DDD9 Small EDRK-rich factor 26.0e-2196.97Show/hide
Query:  RGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKPSTKK
        RGNQREKDRERAQARNGGKGK KDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGK STKK
Subjt:  RGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKPSTKK
A0A6J1KZW7 small EDRK-rich factor 2-like3.9e-2092.65Show/hide
Query:  MTRGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKPSTKK
        MTRGNQREKDRERAQAR GGKGK KDDGLTPEQRRERDAKALQEKAAKKAAQAAS GNSSGGK S KK
Subjt:  MTRGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKPSTKK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G24100.1 Uncharacterised protein family SERF7.3e-1983.87Show/hide
Query:  MTRGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGG
        MTRG+QRE+DRERA AR GGKGKNKDDGLTPEQRRERDAKALQEK AKKAAQAA+  +S GG
Subjt:  MTRGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGG
AT4G13615.1 Uncharacterised protein family SERF1.4e-1777.14Show/hide
Query:  MTRGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQA--ASGGNSSGGKPSTKK
        MTRG+QRE+DRERA AR GGKGKN DDGLTPEQRRERD KALQEKAAKKAAQA  AS G ++GGK +  K
Subjt:  MTRGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQA--ASGGNSSGGKPSTKK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCGCGGAAACCAGAGGGAGAAAGACCGAGAAAGGGCTCAGGCTCGCAACGGTGGCAAGGGTAAAAATAAGGACGATGGTTTGACTCCCGAGCAGCGCCGCGAAAG
AGATGCTAAGGCGCTACAAGAAAAAGCCGCGAAGAAGGCGGCTCAGGCGGCATCGGGAGGTAATTCATCCGGAGGTAAACCTAGCACTAAGAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATTGATCCACTAGTATTGTCTCAATTTAAGCCAAAATATAAAAAAAAATCCATACGAAACTAAAACCAAAAAATAAAAAGGAAATAGAATTTATTCTAAAGTTAGGTAAT
TTTTTGTTTTTTCTAAAAAAGAAAGAAATCGATAGAAGAAAATAGAAGAAAATAGAATAGGAATACAAGTGGGGGCACTCACTATATAAAGAATCTCCGATTCCTCTGTT
CTTTCGATTACCTTCGGTTGACTCTCTGTTTTTAGAGATTGGAATTCTTCGTTTCTTCGGCTAAGTCTCTACCCCAATCCTCCAATTCCACAACTTTCTTCACCACCCAC
TTCAATAATCTCCCTCAAATGACTCGCGGAAACCAGAGGGAGAAAGACCGAGAAAGGGCTCAGGCTCGCAACGGTGGCAAGGGTAAAAATAAGGACGATGGTTTGACTCC
CGAGCAGCGCCGCGAAAGAGATGCTAAGGCGCTACAAGAAAAAGCCGCGAAGAAGGCGGCTCAGGCGGCATCGGGAGGTAATTCATCCGGAGGTAAACCTAGCACTAAGA
AGTAAAATGGTCCTGAGTTTAGAATCATGAACTATGTCGATTTTTCTTAGCTTTGTTCTTGTTGGAACGCTGAAATCTCATGGTTCTTAGACTGTTTGATATTGGAGGAA
TAACCTTCATATGTTTCAGTAATGTGAATTGATATATGTATTATGCTGTCAACGTTCATTGTTGATTATTGTTTTCATCATCTTAGTACTCTTGATCTCTACTTCTGGTG
AGGTAACTATGCTGTTTTGTTGAGATTGGATCCTAATGAAAAATTCTTGTTCATCTGTTATGATA
Protein sequenceShow/hide protein sequence
MTRGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAASGGNSSGGKPSTKK