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PI0013085 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013085
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionSel1-like protein
Genome locationchr08:23118783..23121996
RNA-Seq ExpressionPI0013085
SyntenyPI0013085
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR006597 - Sel1-like repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008442362.1 PREDICTED: uncharacterized protein LOC103486254 [Cucumis melo]1.4e-4999Show/hide
Query:  MEISGGTDGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
        MEISGGT+GLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
Subjt:  MEISGGTDGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS

XP_011651845.1 uncharacterized protein LOC101206121 [Cucumis sativus]3.6e-4897Show/hide
Query:  MEISGGTDGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
        MEISG T+ LNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
Subjt:  MEISGGTDGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS

XP_022157335.1 uncharacterized protein LOC111024062 [Momordica charantia]1.2e-4897Show/hide
Query:  MEISGGTDGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
        MEISGGT+GL+RVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD+LTRDS
Subjt:  MEISGGTDGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS

XP_022934323.1 uncharacterized protein LOC111441521 [Cucurbita moschata]2.1e-4896Show/hide
Query:  MEISGGTDGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
        MEISGGT+GL+RVPLSEVVSDC KRWFKDTLKEAKAGDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
Subjt:  MEISGGTDGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS

XP_022971526.1 uncharacterized protein LOC111470221 [Cucurbita maxima]3.3e-4692Show/hide
Query:  MEISGGTDGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
        MEISGGT+ LNRVPLSEVVSDCVKRWFKDTL EAK GDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD++T DS
Subjt:  MEISGGTDGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS

TrEMBL top hitse value%identityAlignment
A0A1S3B5I4 uncharacterized protein LOC1034862547.0e-5099Show/hide
Query:  MEISGGTDGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
        MEISGGT+GLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
Subjt:  MEISGGTDGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS

A0A5D3DNP0 Sel1-like protein7.0e-5099Show/hide
Query:  MEISGGTDGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
        MEISGGT+GLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
Subjt:  MEISGGTDGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS

A0A6J1DSS4 uncharacterized protein LOC1110240625.9e-4997Show/hide
Query:  MEISGGTDGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
        MEISGGT+GL+RVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD+LTRDS
Subjt:  MEISGGTDGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS

A0A6J1F7C2 uncharacterized protein LOC1114415211.0e-4896Show/hide
Query:  MEISGGTDGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
        MEISGGT+GL+RVPLSEVVSDC KRWFKDTLKEAKAGDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
Subjt:  MEISGGTDGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS

A0A6J1J881 uncharacterized protein LOC1114821711.0e-4896Show/hide
Query:  MEISGGTDGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
        MEISGGT+GL+RVPLSEVVSDC KRWFKDTLKEAKAGDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
Subjt:  MEISGGTDGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G38450.1 CONTAINS InterPro DOMAIN/s: Sel1-like (InterPro:IPR006597)5.7e-3682.93Show/hide
Query:  VPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD
        VPLS VVSDC KRWFKDTL+EAKAG+I MQVL+GQMYYSGYGVP+DA+KGR+W+TKASR RSSVWKV DK PGYNASDSDS+
Subjt:  VPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD

AT5G05360.1 unknown protein3.3e-3670.65Show/hide
Query:  SGGTDGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDE
        + G+D +NRVPL++VV DCV+RWF+DTLKEAK+GD+ MQVLVGQMY SGYG+P+D  KGR W+ KASR+RSS W+VSDK PGYNASDSDS++
Subjt:  SGGTDGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDE

AT5G05360.2 unknown protein3.8e-3269.05Show/hide
Query:  SGGTDGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN
        + G+D +NRVPL++VV DCV+RWF+DTLKEAK+GD+ MQVLVGQMY SGYG+P+D  KGR W+ KASR+RSS W+VSDK PG N
Subjt:  SGGTDGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATTAGCGGAGGAACAGATGGCTTGAATCGCGTTCCTTTATCAGAAGTTGTTTCTGATTGCGTCAAAAGATGGTTTAAGGACACTTTGAAGGAAGCCAAAGCTGG
CGATATCAACATGCAGGTCTTGGTGGGTCAAATGTATTATAGCGGTTATGGGGTTCCTCGAGATGCTCAGAAGGGAAGAATTTGGATGACAAAAGCATCAAGAAGTCGAT
CGTCGGTCTGGAAAGTTAGTGATAAACATCCAGGCTACAATGCTAGTGATTCAGATTCAGATGAATTGACTCGTGATTCTTAA
mRNA sequenceShow/hide mRNA sequence
TTTTTTCTGGGTTTCTTATTCTTTATTTATTTTATTTTTCTTAAAAAAAAAAAAAAAAAAAACCCAGCAAGAGGACAACGATTTTTGTACCAGGAAGAAGGAAGAATCTC
CCCGATATCATAAGATCAAGGTTTCGGTTCCAGTAATCGAAGCCGTTGAAGTTGAAATACATGGAGATTAGCGGAGGAACAGATGGCTTGAATCGCGTTCCTTTATCAGA
AGTTGTTTCTGATTGCGTCAAAAGATGGTTTAAGGACACTTTGAAGGAAGCCAAAGCTGGCGATATCAACATGCAGGTCTTGGTGGGTCAAATGTATTATAGCGGTTATG
GGGTTCCTCGAGATGCTCAGAAGGGAAGAATTTGGATGACAAAAGCATCAAGAAGTCGATCGTCGGTCTGGAAAGTTAGTGATAAACATCCAGGCTACAATGCTAGTGAT
TCAGATTCAGATGAATTGACTCGTGATTCTTAACTACACCAGTGTTGCTGATTTCTATGTCATGTCAAAACAACCACTGGATGTGGTTTTCTCTGTGGAAACTCTACTTT
CTCAGCTATCTTTGTAGCTCTACGCATACTTGCTGCCTGATTGTTGGATTTGAAGGATGTAATATGCTTTGATTTTACCTTTACTCTACAAACAATTTGTCGCACTTTCC
TGTGGTCAAATTACCTAAATCTTATATTCATTTTTCATTTTCTGTTTAGGTTACCACTTTTTATTGTCTGCAGTAGATTTTCTTTTGATTTTTGCATACATGTCCAAATT
TTGAACTTTTTAGTTGCTATCTCAAATTCTCCTATTAAGAACAGTCTGAAGTCTTTCCGACTATGCTTCTACTTGTCTTCCCTTTTTCCTTCTTGGTACCCTG
Protein sequenceShow/hide protein sequence
MEISGGTDGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS