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PI0013096 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013096
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase
Genome locationchr01:20613645..20613872
RNA-Seq ExpressionPI0013096
SyntenyPI0013096
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038192.1 hypothetical protein E6C27_scaffold270G00250 [Cucumis melo var. makuwa]1.4e-1766.15Show/hide
Query:  MAISQVNATSSLFQAVKQVDKIGCVGCGGLHNTNACPLNTETIVYMKHDPYSSTYNPGWRNHPNF
        M   QVNA SS FQ+VKQVD+IGC+  G  H  +ACPLN E + Y+KHDPYS+TYNP WRNHPNF
Subjt:  MAISQVNATSSLFQAVKQVDKIGCVGCGGLHNTNACPLNTETIVYMKHDPYSSTYNPGWRNHPNF

KAA0054822.1 hypothetical protein E6C27_scaffold437G001150 [Cucumis melo var. makuwa]1.2e-1361.4Show/hide
Query:  VKQVDKIGCVGCGGLHNTNACPLNTETIVYMKHDPYSSTYNPGWRNHPNFGWRGTGQ
        + +V++IGCVGC  LH  +AC LN ETI Y+K+DPYS+TYN GWR+H NF W G GQ
Subjt:  VKQVDKIGCVGCGGLHNTNACPLNTETIVYMKHDPYSSTYNPGWRNHPNFGWRGTGQ

KAA0058408.1 uncharacterized protein E6C27_scaffold409G001200 [Cucumis melo var. makuwa]3.8e-1858.11Show/hide
Query:  MAISQVNATSSLFQAVKQVDKIGCVGCGGLHNTNACPLNTETIVYMKHDPYSSTYNPGWRNHPNFGWRGTGQQN
        M ++QVN  SS    VK V ++ CVGC G +NT+ CP NT+ I Y K+DPYS+TYN GWRNH NF W GTGQ N
Subjt:  MAISQVNATSSLFQAVKQVDKIGCVGCGGLHNTNACPLNTETIVYMKHDPYSSTYNPGWRNHPNFGWRGTGQQN

KAA0066652.1 uncharacterized protein E6C27_scaffold979G00840 [Cucumis melo var. makuwa]1.6e-1658.21Show/hide
Query:  MAISQVNATSSLFQAVKQVDKIGCVGCGGLHNTNACPLNTETIVYMKHDPYSSTYNPGWRNHPNFGW
        M + +VN   S    V+QV ++GCVGCGG HNT+ CP NTET+ Y+K+DPY +TYN GWRNH NF W
Subjt:  MAISQVNATSSLFQAVKQVDKIGCVGCGGLHNTNACPLNTETIVYMKHDPYSSTYNPGWRNHPNFGW

TYJ99639.1 hypothetical protein E5676_scaffold562G00110 [Cucumis melo var. makuwa]1.6e-1361.4Show/hide
Query:  VKQVDKIGCVGCGGLHNTNACPLNTETIVYMKHDPYSSTYNPGWRNHPNFGWRGTGQ
        + +V++IGCVGC  LH  +AC LN ETI Y+K+DPYS+TYN GWR H NF W G GQ
Subjt:  VKQVDKIGCVGCGGLHNTNACPLNTETIVYMKHDPYSSTYNPGWRNHPNFGWRGTGQ

TrEMBL top hitse value%identityAlignment
A0A5A7UG80 Uncharacterized protein6.0e-1461.4Show/hide
Query:  VKQVDKIGCVGCGGLHNTNACPLNTETIVYMKHDPYSSTYNPGWRNHPNFGWRGTGQ
        + +V++IGCVGC  LH  +AC LN ETI Y+K+DPYS+TYN GWR+H NF W G GQ
Subjt:  VKQVDKIGCVGCGGLHNTNACPLNTETIVYMKHDPYSSTYNPGWRNHPNFGWRGTGQ

A0A5A7UTC1 Uncharacterized protein1.8e-1858.11Show/hide
Query:  MAISQVNATSSLFQAVKQVDKIGCVGCGGLHNTNACPLNTETIVYMKHDPYSSTYNPGWRNHPNFGWRGTGQQN
        M ++QVN  SS    VK V ++ CVGC G +NT+ CP NT+ I Y K+DPYS+TYN GWRNH NF W GTGQ N
Subjt:  MAISQVNATSSLFQAVKQVDKIGCVGCGGLHNTNACPLNTETIVYMKHDPYSSTYNPGWRNHPNFGWRGTGQQN

A0A5A7VE68 Uncharacterized protein7.6e-1758.21Show/hide
Query:  MAISQVNATSSLFQAVKQVDKIGCVGCGGLHNTNACPLNTETIVYMKHDPYSSTYNPGWRNHPNFGW
        M + +VN   S    V+QV ++GCVGCGG HNT+ CP NTET+ Y+K+DPY +TYN GWRNH NF W
Subjt:  MAISQVNATSSLFQAVKQVDKIGCVGCGGLHNTNACPLNTETIVYMKHDPYSSTYNPGWRNHPNFGW

A0A5D3BKZ6 Uncharacterized protein7.9e-1461.4Show/hide
Query:  VKQVDKIGCVGCGGLHNTNACPLNTETIVYMKHDPYSSTYNPGWRNHPNFGWRGTGQ
        + +V++IGCVGC  LH  +AC LN ETI Y+K+DPYS+TYN GWR H NF W G GQ
Subjt:  VKQVDKIGCVGCGGLHNTNACPLNTETIVYMKHDPYSSTYNPGWRNHPNFGWRGTGQ

A0A5D3CSC7 Uncharacterized protein6.9e-1866.15Show/hide
Query:  MAISQVNATSSLFQAVKQVDKIGCVGCGGLHNTNACPLNTETIVYMKHDPYSSTYNPGWRNHPNF
        M   QVNA SS FQ+VKQVD+IGC+  G  H  +ACPLN E + Y+KHDPYS+TYNP WRNHPNF
Subjt:  MAISQVNATSSLFQAVKQVDKIGCVGCGGLHNTNACPLNTETIVYMKHDPYSSTYNPGWRNHPNF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATATCACAAGTTAACGCAACGAGCAGTTTGTTTCAGGCGGTAAAGCAGGTGGACAAGATTGGATGTGTGGGATGCGGTGGTCTTCACAACACTAACGCATGTCC
ATTAAACACTGAAACTATCGTGTATATGAAGCACGACCCCTACTCCAGCACATACAATCCAGGTTGGAGAAACCATCCCAACTTTGGGTGGAGAGGAACGGGTCAACAAA
ACCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGATATCACAAGTTAACGCAACGAGCAGTTTGTTTCAGGCGGTAAAGCAGGTGGACAAGATTGGATGTGTGGGATGCGGTGGTCTTCACAACACTAACGCATGTCC
ATTAAACACTGAAACTATCGTGTATATGAAGCACGACCCCTACTCCAGCACATACAATCCAGGTTGGAGAAACCATCCCAACTTTGGGTGGAGAGGAACGGGTCAACAAA
ACCATTGA
Protein sequenceShow/hide protein sequence
MAISQVNATSSLFQAVKQVDKIGCVGCGGLHNTNACPLNTETIVYMKHDPYSSTYNPGWRNHPNFGWRGTGQQNH