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PI0013110 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013110
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGirdin-like
Genome locationchr07:19095274..19095705
RNA-Seq ExpressionPI0013110
SyntenyPI0013110
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044912.1 girdin-like [Cucumis melo var. makuwa]1.7e-5979.29Show/hide
Query:  EKIIWKAQWMLLKAVIYRCGDFHSVPLLGPWGGVSYTSLLVLRQMWFKQFIPPTHNLQEFDFSYDLEDCHEKKRRAVYAWKSIRKIKDKGHYEGVTSGYE
        E +IWKAQWM LKAVIYRCGDFHSVPLLGPWGGV+YT LLVLRQ+W KQFIPPTHNLQE DFSYD EDC  KKR+AV AWKSIRKIKDKGHYEGVTSGYE
Subjt:  EKIIWKAQWMLLKAVIYRCGDFHSVPLLGPWGGVSYTSLLVLRQMWFKQFIPPTHNLQEFDFSYDLEDCHEKKRRAVYAWKSIRKIKDKGHYEGVTSGYE

Query:  AWQANRRKNVIDVTLRKVNERVEEKGLEQPNQWVEENTKL
        AWQANRRKN+ID++ R+V ER +E   EQPNQW+E++ +L
Subjt:  AWQANRRKNVIDVTLRKVNERVEEKGLEQPNQWVEENTKL

TYK16558.1 girdin-like [Cucumis melo var. makuwa]1.7e-5979.29Show/hide
Query:  EKIIWKAQWMLLKAVIYRCGDFHSVPLLGPWGGVSYTSLLVLRQMWFKQFIPPTHNLQEFDFSYDLEDCHEKKRRAVYAWKSIRKIKDKGHYEGVTSGYE
        E +IWKAQWM LKAVIYRCGDFHSVPLLGPWGGV+YT LLVLRQ+W KQFIPPTHNLQE DFSYD EDC  KKR+AV AWKSIRKIKDKGHYEGVTSGYE
Subjt:  EKIIWKAQWMLLKAVIYRCGDFHSVPLLGPWGGVSYTSLLVLRQMWFKQFIPPTHNLQEFDFSYDLEDCHEKKRRAVYAWKSIRKIKDKGHYEGVTSGYE

Query:  AWQANRRKNVIDVTLRKVNERVEEKGLEQPNQWVEENTKL
        AWQANRRKN+ID++ R+V ER +E   EQPNQW+E++ +L
Subjt:  AWQANRRKNVIDVTLRKVNERVEEKGLEQPNQWVEENTKL

TYK23955.1 girdin-like [Cucumis melo var. makuwa]3.8e-5978.57Show/hide
Query:  EKIIWKAQWMLLKAVIYRCGDFHSVPLLGPWGGVSYTSLLVLRQMWFKQFIPPTHNLQEFDFSYDLEDCHEKKRRAVYAWKSIRKIKDKGHYEGVTSGYE
        E +IWKAQWM LKAVIYRCGDFHSVPLLGPWGGV+Y  LLVLRQ+W KQFIPPTHNLQE DFSYDLEDC  KKR+AV AWKSIRKIKDKGHYEGVTSGYE
Subjt:  EKIIWKAQWMLLKAVIYRCGDFHSVPLLGPWGGVSYTSLLVLRQMWFKQFIPPTHNLQEFDFSYDLEDCHEKKRRAVYAWKSIRKIKDKGHYEGVTSGYE

Query:  AWQANRRKNVIDVTLRKVNERVEEKGLEQPNQWVEENTKL
        AWQANRRKN+ID++ R+V ER +E   EQPNQW++++ +L
Subjt:  AWQANRRKNVIDVTLRKVNERVEEKGLEQPNQWVEENTKL

XP_031739496.1 uncharacterized protein LOC116403043 [Cucumis sativus]4.9e-5978.32Show/hide
Query:  MNFEKIIWKAQWMLLKAVIYRCGDFHSVPLLGPWGGVSYTSLLVLRQMWFKQFIPPTHNLQEFDFSYDLEDCHEKKRRAVYAWKSIRKIKDKGHYEGVTS
        ++ E +IWKAQWM LKAVIYRCGDFHSVPLLGPWGGV+YT LLVLRQ+W KQFIPPTHNLQ+ DF+YD EDC  KK RAV AWKS+RKIKDKGHYEGVTS
Subjt:  MNFEKIIWKAQWMLLKAVIYRCGDFHSVPLLGPWGGVSYTSLLVLRQMWFKQFIPPTHNLQEFDFSYDLEDCHEKKRRAVYAWKSIRKIKDKGHYEGVTS

Query:  GYEAWQANRRKNVIDVTLRKVNERVEEKGLEQPNQWVEENTKL
        GYEAWQ NRRKNVI  TL+ V ERVEE   EQP+QWVE+ TKL
Subjt:  GYEAWQANRRKNVIDVTLRKVNERVEEKGLEQPNQWVEENTKL

XP_031740432.1 uncharacterized protein LOC116403430 [Cucumis sativus]1.3e-5979.02Show/hide
Query:  MNFEKIIWKAQWMLLKAVIYRCGDFHSVPLLGPWGGVSYTSLLVLRQMWFKQFIPPTHNLQEFDFSYDLEDCHEKKRRAVYAWKSIRKIKDKGHYEGVTS
        ++ E +IWKAQWM LKAVIYRCGDFHSVPLLGPWGGV+YT LLVLRQ+W KQFIPPTHNLQ+ DF+YD EDC  KK RAV AWKS+RKIKDKGHYEGVTS
Subjt:  MNFEKIIWKAQWMLLKAVIYRCGDFHSVPLLGPWGGVSYTSLLVLRQMWFKQFIPPTHNLQEFDFSYDLEDCHEKKRRAVYAWKSIRKIKDKGHYEGVTS

Query:  GYEAWQANRRKNVIDVTLRKVNERVEEKGLEQPNQWVEENTKL
        GYEAWQ NRRKNVI  TLR+V ERVEE   EQP+QWVE+ TKL
Subjt:  GYEAWQANRRKNVIDVTLRKVNERVEEKGLEQPNQWVEENTKL

TrEMBL top hitse value%identityAlignment
A0A5A7T5S7 Girdin-like4.0e-5978.57Show/hide
Query:  EKIIWKAQWMLLKAVIYRCGDFHSVPLLGPWGGVSYTSLLVLRQMWFKQFIPPTHNLQEFDFSYDLEDCHEKKRRAVYAWKSIRKIKDKGHYEGVTSGYE
        E +IWKAQWM LKAVIYRCGDFHSVPLLGPWGGV+YT LLVLRQ+W KQFIPPTHNLQE DFSYD EDC  KKR+AV AWKSIRKIKDKGHYEGVTSGYE
Subjt:  EKIIWKAQWMLLKAVIYRCGDFHSVPLLGPWGGVSYTSLLVLRQMWFKQFIPPTHNLQEFDFSYDLEDCHEKKRRAVYAWKSIRKIKDKGHYEGVTSGYE

Query:  AWQANRRKNVIDVTLRKVNERVEEKGLEQPNQWVEENTKL
        AWQANRRKN+ID++ R+V E  +E   EQPNQW+E++ +L
Subjt:  AWQANRRKNVIDVTLRKVNERVEEKGLEQPNQWVEENTKL

A0A5A7TNJ1 Girdin-like8.2e-6079.29Show/hide
Query:  EKIIWKAQWMLLKAVIYRCGDFHSVPLLGPWGGVSYTSLLVLRQMWFKQFIPPTHNLQEFDFSYDLEDCHEKKRRAVYAWKSIRKIKDKGHYEGVTSGYE
        E +IWKAQWM LKAVIYRCGDFHSVPLLGPWGGV+YT LLVLRQ+W KQFIPPTHNLQE DFSYD EDC  KKR+AV AWKSIRKIKDKGHYEGVTSGYE
Subjt:  EKIIWKAQWMLLKAVIYRCGDFHSVPLLGPWGGVSYTSLLVLRQMWFKQFIPPTHNLQEFDFSYDLEDCHEKKRRAVYAWKSIRKIKDKGHYEGVTSGYE

Query:  AWQANRRKNVIDVTLRKVNERVEEKGLEQPNQWVEENTKL
        AWQANRRKN+ID++ R+V ER +E   EQPNQW+E++ +L
Subjt:  AWQANRRKNVIDVTLRKVNERVEEKGLEQPNQWVEENTKL

A0A5A7UL51 Girdin-like2.3e-5473.57Show/hide
Query:  EKIIWKAQWMLLKAVIYRCGDFHSVPLLGPWGGVSYTSLLVLRQMWFKQFIPPTHNLQEFDFSYDLEDCHEKKRRAVYAWKSIRKIKDKGHYEGVTSGYE
        E +IWKAQWM LKA IYRC DFHSVPLLGPWGGV+YT LLVLRQ+W KQFIPPT NLQE DFSY+ EDC  KKR+AV AWKSIRKIKDKGH EGVTSGYE
Subjt:  EKIIWKAQWMLLKAVIYRCGDFHSVPLLGPWGGVSYTSLLVLRQMWFKQFIPPTHNLQEFDFSYDLEDCHEKKRRAVYAWKSIRKIKDKGHYEGVTSGYE

Query:  AWQANRRKNVIDVTLRKVNERVEEKGLEQPNQWVEENTKL
        AW+AN+RKN+ID++ R+V ER +E    QPNQW+E++ +L
Subjt:  AWQANRRKNVIDVTLRKVNERVEEKGLEQPNQWVEENTKL

A0A5D3CZ50 Girdin-like8.2e-6079.29Show/hide
Query:  EKIIWKAQWMLLKAVIYRCGDFHSVPLLGPWGGVSYTSLLVLRQMWFKQFIPPTHNLQEFDFSYDLEDCHEKKRRAVYAWKSIRKIKDKGHYEGVTSGYE
        E +IWKAQWM LKAVIYRCGDFHSVPLLGPWGGV+YT LLVLRQ+W KQFIPPTHNLQE DFSYD EDC  KKR+AV AWKSIRKIKDKGHYEGVTSGYE
Subjt:  EKIIWKAQWMLLKAVIYRCGDFHSVPLLGPWGGVSYTSLLVLRQMWFKQFIPPTHNLQEFDFSYDLEDCHEKKRRAVYAWKSIRKIKDKGHYEGVTSGYE

Query:  AWQANRRKNVIDVTLRKVNERVEEKGLEQPNQWVEENTKL
        AWQANRRKN+ID++ R+V ER +E   EQPNQW+E++ +L
Subjt:  AWQANRRKNVIDVTLRKVNERVEEKGLEQPNQWVEENTKL

A0A5D3DK34 Girdin-like1.8e-5978.57Show/hide
Query:  EKIIWKAQWMLLKAVIYRCGDFHSVPLLGPWGGVSYTSLLVLRQMWFKQFIPPTHNLQEFDFSYDLEDCHEKKRRAVYAWKSIRKIKDKGHYEGVTSGYE
        E +IWKAQWM LKAVIYRCGDFHSVPLLGPWGGV+Y  LLVLRQ+W KQFIPPTHNLQE DFSYDLEDC  KKR+AV AWKSIRKIKDKGHYEGVTSGYE
Subjt:  EKIIWKAQWMLLKAVIYRCGDFHSVPLLGPWGGVSYTSLLVLRQMWFKQFIPPTHNLQEFDFSYDLEDCHEKKRRAVYAWKSIRKIKDKGHYEGVTSGYE

Query:  AWQANRRKNVIDVTLRKVNERVEEKGLEQPNQWVEENTKL
        AWQANRRKN+ID++ R+V ER +E   EQPNQW++++ +L
Subjt:  AWQANRRKNVIDVTLRKVNERVEEKGLEQPNQWVEENTKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTTTGAAAAGATCATATGGAAGGCTCAATGGATGCTTTTGAAAGCAGTGATATATAGATGTGGAGATTTTCATAGTGTGCCTTTGTTGGGACCTTGGGGAGGTGT
TAGCTATACATCGTTGTTAGTTTTGCGTCAAATGTGGTTCAAACAGTTTATACCACCAACTCACAACCTACAAGAGTTTGACTTTTCATATGATCTCGAAGATTGTCATG
AAAAAAAACGTCGAGCAGTATATGCATGGAAATCTATAAGGAAGATAAAAGACAAAGGACACTACGAGGGAGTTACCAGTGGGTACGAGGCATGGCAGGCAAACAGAAGG
AAGAACGTAATAGATGTTACCTTAAGGAAGGTAAATGAAAGGGTAGAAGAGAAAGGGCTTGAACAACCAAATCAGTGGGTTGAGGAGAACACAAAATTATAA
mRNA sequenceShow/hide mRNA sequence
ATGAATTTTGAAAAGATCATATGGAAGGCTCAATGGATGCTTTTGAAAGCAGTGATATATAGATGTGGAGATTTTCATAGTGTGCCTTTGTTGGGACCTTGGGGAGGTGT
TAGCTATACATCGTTGTTAGTTTTGCGTCAAATGTGGTTCAAACAGTTTATACCACCAACTCACAACCTACAAGAGTTTGACTTTTCATATGATCTCGAAGATTGTCATG
AAAAAAAACGTCGAGCAGTATATGCATGGAAATCTATAAGGAAGATAAAAGACAAAGGACACTACGAGGGAGTTACCAGTGGGTACGAGGCATGGCAGGCAAACAGAAGG
AAGAACGTAATAGATGTTACCTTAAGGAAGGTAAATGAAAGGGTAGAAGAGAAAGGGCTTGAACAACCAAATCAGTGGGTTGAGGAGAACACAAAATTATAA
Protein sequenceShow/hide protein sequence
MNFEKIIWKAQWMLLKAVIYRCGDFHSVPLLGPWGGVSYTSLLVLRQMWFKQFIPPTHNLQEFDFSYDLEDCHEKKRRAVYAWKSIRKIKDKGHYEGVTSGYEAWQANRR
KNVIDVTLRKVNERVEEKGLEQPNQWVEENTKL