; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0013156 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013156
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionextensin-like
Genome locationchr03:9590296..9590586
RNA-Seq ExpressionPI0013156
SyntenyPI0013156
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058957.1 hypothetical protein E6C27_scaffold98G001420 [Cucumis melo var. makuwa]1.9e-3585.71Show/hide
Query:  MGFATLASYLFSLLIAFFSLNLPSKLTAHYIHQSSSTNLYEYGPP--PLPPPAPICRQGAPPPATKQHELKPLPSLSPPPPKFKWPRRFTPKSPPPPF
        MGF TLASYLFSLLIAFF LNLP+KLTAHYIH+SSSTNLY YG P  PLPPP PICRQGAPPPA KQ++LK LPSLSPPPP FKWPRRFTPKSPPPPF
Subjt:  MGFATLASYLFSLLIAFFSLNLPSKLTAHYIHQSSSTNLYEYGPP--PLPPPAPICRQGAPPPATKQHELKPLPSLSPPPPKFKWPRRFTPKSPPPPF

TYK29731.1 hypothetical protein E5676_scaffold63236G00010 [Cucumis melo var. makuwa]6.3e-1847.86Show/hide
Query:  MGFATLASYLFSLLIAFFSLNLPSKLTAHYIHQSSSTNLYEYGPPPLPPPAPICRQGAPP-----------PATKQHELKPLPS----------------
        MGF  LASYLF LL AFFSLNLPSKLTAHYIH SS T L EY PPPLP P  +C  GAPP           PA K+H+ +P PS                
Subjt:  MGFATLASYLFSLLIAFFSLNLPSKLTAHYIHQSSSTNLYEYGPPPLPPPAPICRQGAPP-----------PATKQHELKPLPS----------------

Query:  -----------------LSPPPPKFKWPRRFTPKSPPPPF
                          S PPPK+ WPR+F   SPPPPF
Subjt:  -----------------LSPPPPKFKWPRRFTPKSPPPPF

XP_022939147.1 extensin-like [Cucurbita moschata]2.0e-0847.27Show/hide
Query:  MGFATLAS-YLFSLLIAFFSLNLPSKLTAHYIHQSSSTNLYEYGPPPLP-----------PPAPICRQGA--PPPATKQHELKPLPSLSPPPPKFKWPRR
        MG   L+S YLFSLLIA  SL+LPSKL A  +H S  TN ++Y PPP P           PP  +C Q A  PPP   +H+ K  P    PP    W R+
Subjt:  MGFATLAS-YLFSLLIAFFSLNLPSKLTAHYIHQSSSTNLYEYGPPPLP-----------PPAPICRQGA--PPPATKQHELKPLPSLSPPPPKFKWPRR

Query:  FTPKSPPPPF
        FT  SPPPPF
Subjt:  FTPKSPPPPF

XP_022993352.1 extensin-like [Cucurbita maxima]1.3e-1052.88Show/hide
Query:  MGFATLAS-YLFSLLIAFFSLNLPSKLTAHYIHQSSSTNLYEYGPPP------LP-PPAPICRQGAPPPATKQHELKPLPSLSPPPPKFKWPRRFTPKSP
        MG   LAS YLFSLLIA  SL+LPSKL A  +H S  TN +EY PPP      LP PP  +C Q APPP   +H+ K  P    PP    W R+FT  SP
Subjt:  MGFATLAS-YLFSLLIAFFSLNLPSKLTAHYIHQSSSTNLYEYGPPP------LP-PPAPICRQGAPPPATKQHELKPLPSLSPPPPKFKWPRRFTPKSP

Query:  PPPF
        PPPF
Subjt:  PPPF

XP_023551507.1 extensin-3-like [Cucurbita pepo subsp. pepo]8.2e-1051.38Show/hide
Query:  MGFATLAS-YLFSLLIAFFSLNLPSKLTAHYIHQSSSTNLYEYGPPPLP-----------PPAPICRQGAPPPATK-QHELKPLPSLSPPPPKFKWPRRF
        MG   L S YLFSLLIA  SL+LPSKL A  +H S  TN ++Y PPP P           PP  +C Q APPP  K +H+ KP    SPP P   W R+F
Subjt:  MGFATLAS-YLFSLLIAFFSLNLPSKLTAHYIHQSSSTNLYEYGPPPLP-----------PPAPICRQGAPPPATK-QHELKPLPSLSPPPPKFKWPRRF

Query:  TPKSPPPPF
        T KSPPPPF
Subjt:  TPKSPPPPF

TrEMBL top hitse value%identityAlignment
A0A0A0KI69 Uncharacterized protein6.3e-4091.84Show/hide
Query:  MGFATLASYLFSLLIAFFSLNLPSKLTAHYIHQSSSTNLYEYGPPPLP--PPAPICRQGAPPPATKQHELKPLPSLSPPPPKFKWPRRFTPKSPPPPF
        MGF TLASYLFSLLIAFF LNLPSKLTAHYIHQSSSTNLYEYGPPPLP  PP PICRQGAPPPA KQ++LKPLPSLSPPPPKFKWPRRFTPKSPPPPF
Subjt:  MGFATLASYLFSLLIAFFSLNLPSKLTAHYIHQSSSTNLYEYGPPPLP--PPAPICRQGAPPPATKQHELKPLPSLSPPPPKFKWPRRFTPKSPPPPF

A0A5A7UW72 Uncharacterized protein9.4e-3685.71Show/hide
Query:  MGFATLASYLFSLLIAFFSLNLPSKLTAHYIHQSSSTNLYEYGPP--PLPPPAPICRQGAPPPATKQHELKPLPSLSPPPPKFKWPRRFTPKSPPPPF
        MGF TLASYLFSLLIAFF LNLP+KLTAHYIH+SSSTNLY YG P  PLPPP PICRQGAPPPA KQ++LK LPSLSPPPP FKWPRRFTPKSPPPPF
Subjt:  MGFATLASYLFSLLIAFFSLNLPSKLTAHYIHQSSSTNLYEYGPP--PLPPPAPICRQGAPPPATKQHELKPLPSLSPPPPKFKWPRRFTPKSPPPPF

A0A5D3E2A1 Uncharacterized protein3.0e-1847.86Show/hide
Query:  MGFATLASYLFSLLIAFFSLNLPSKLTAHYIHQSSSTNLYEYGPPPLPPPAPICRQGAPP-----------PATKQHELKPLPS----------------
        MGF  LASYLF LL AFFSLNLPSKLTAHYIH SS T L EY PPPLP P  +C  GAPP           PA K+H+ +P PS                
Subjt:  MGFATLASYLFSLLIAFFSLNLPSKLTAHYIHQSSSTNLYEYGPPPLPPPAPICRQGAPP-----------PATKQHELKPLPS----------------

Query:  -----------------LSPPPPKFKWPRRFTPKSPPPPF
                          S PPPK+ WPR+F   SPPPPF
Subjt:  -----------------LSPPPPKFKWPRRFTPKSPPPPF

A0A6J1FFZ9 extensin-like9.8e-0947.27Show/hide
Query:  MGFATLAS-YLFSLLIAFFSLNLPSKLTAHYIHQSSSTNLYEYGPPPLP-----------PPAPICRQGA--PPPATKQHELKPLPSLSPPPPKFKWPRR
        MG   L+S YLFSLLIA  SL+LPSKL A  +H S  TN ++Y PPP P           PP  +C Q A  PPP   +H+ K  P    PP    W R+
Subjt:  MGFATLAS-YLFSLLIAFFSLNLPSKLTAHYIHQSSSTNLYEYGPPPLP-----------PPAPICRQGA--PPPATKQHELKPLPSLSPPPPKFKWPRR

Query:  FTPKSPPPPF
        FT  SPPPPF
Subjt:  FTPKSPPPPF

A0A6J1JSJ5 extensin-like6.1e-1152.88Show/hide
Query:  MGFATLAS-YLFSLLIAFFSLNLPSKLTAHYIHQSSSTNLYEYGPPP------LP-PPAPICRQGAPPPATKQHELKPLPSLSPPPPKFKWPRRFTPKSP
        MG   LAS YLFSLLIA  SL+LPSKL A  +H S  TN +EY PPP      LP PP  +C Q APPP   +H+ K  P    PP    W R+FT  SP
Subjt:  MGFATLAS-YLFSLLIAFFSLNLPSKLTAHYIHQSSSTNLYEYGPPP------LP-PPAPICRQGAPPPATKQHELKPLPSLSPPPPKFKWPRRFTPKSP

Query:  PPPF
        PPPF
Subjt:  PPPF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTTGCAACATTGGCCTCCTATCTTTTCTCCCTTCTCATTGCATTTTTCTCTTTAAATCTCCCCTCCAAATTGACTGCACATTACATTCACCAATCTTCATCCAC
CAACCTTTATGAATACGGACCTCCTCCGCTGCCACCGCCGGCTCCGATATGCAGGCAAGGCGCACCACCACCAGCCACGAAACAACACGAATTGAAGCCGCTGCCATCGT
TGTCGCCACCACCACCCAAGTTCAAATGGCCACGAAGGTTTACCCCTAAATCACCTCCGCCTCCTTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTTGCAACATTGGCCTCCTATCTTTTCTCCCTTCTCATTGCATTTTTCTCTTTAAATCTCCCCTCCAAATTGACTGCACATTACATTCACCAATCTTCATCCAC
CAACCTTTATGAATACGGACCTCCTCCGCTGCCACCGCCGGCTCCGATATGCAGGCAAGGCGCACCACCACCAGCCACGAAACAACACGAATTGAAGCCGCTGCCATCGT
TGTCGCCACCACCACCCAAGTTCAAATGGCCACGAAGGTTTACCCCTAAATCACCTCCGCCTCCTTTCTGA
Protein sequenceShow/hide protein sequence
MGFATLASYLFSLLIAFFSLNLPSKLTAHYIHQSSSTNLYEYGPPPLPPPAPICRQGAPPPATKQHELKPLPSLSPPPPKFKWPRRFTPKSPPPPF