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PI0013181 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013181
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase
Genome locationchr06:21772825..21773325
RNA-Seq ExpressionPI0013181
SyntenyPI0013181
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031722.1 uncharacterized protein E6C27_scaffold139G005100 [Cucumis melo var. makuwa]1.6e-4866.03Show/hide
Query:  MSIAKQMGKAYADRLVEIEKQILYLLEIPDTVRFLEGRIEEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKTT---RINYERGDSSTSSVAHVEERI
        MS +   GKA  DRLVE+E+Q+LYL+E+PD++R+LE R+EE+ +K + IDAVTGR++G PI+EL+TRVD LE        +NYERGDSST SVAH+EER+
Subjt:  MSIAKQMGKAYADRLVEIEKQILYLLEIPDTVRFLEGRIEEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKTT---RINYERGDSSTSSVAHVEERI

Query:  GELDSSQKSIVKMINDMSEDFRAALDVVRNEIADVSARVNLTMRAMANLTPTGGAI
         ELDSSQK++++MIN MSEDFRA LDVVRNEIADV+AR+NLTMRAMAN  P GGAI
Subjt:  GELDSSQKSIVKMINDMSEDFRAALDVVRNEIADVSARVNLTMRAMANLTPTGGAI

KAA0037220.1 reverse transcriptase [Cucumis melo var. makuwa]2.0e-4866.03Show/hide
Query:  MSIAKQMGKAYADRLVEIEKQILYLLEIPDTVRFLEGRIEEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKTT---RINYERGDSSTSSVAHVEERI
        MS +   GKA  DRLVE+E+Q+LYL+E+PD++R+LE R+EE+SEK + IDAV GR++G PI+EL+TRVD LE        +NYERGDSST SVAH+EER+
Subjt:  MSIAKQMGKAYADRLVEIEKQILYLLEIPDTVRFLEGRIEEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKTT---RINYERGDSSTSSVAHVEERI

Query:  GELDSSQKSIVKMINDMSEDFRAALDVVRNEIADVSARVNLTMRAMANLTPTGGAI
         ELDSSQK++++MIN MSEDFRA LDVVRNEIADV+AR++LTMRAMAN  P GGAI
Subjt:  GELDSSQKSIVKMINDMSEDFRAALDVVRNEIADVSARVNLTMRAMANLTPTGGAI

KAA0053339.1 reverse transcriptase [Cucumis melo var. makuwa]7.0e-4966.67Show/hide
Query:  MSIAKQMGKAYADRLVEIEKQILYLLEIPDTVRFLEGRIEEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKTT---RINYERGDSSTSSVAHVEERI
        MS +   GKA  DRLVE+E+Q+LYL+E+PD++R+LE R+EE+SEK + IDAV GR++G PI+EL+TRVD LE        +NYERGDSST SVAH+EER+
Subjt:  MSIAKQMGKAYADRLVEIEKQILYLLEIPDTVRFLEGRIEEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKTT---RINYERGDSSTSSVAHVEERI

Query:  GELDSSQKSIVKMINDMSEDFRAALDVVRNEIADVSARVNLTMRAMANLTPTGGAI
         ELDSSQK++++MIN MSEDFRA LDVVRNEIADV+AR++LTMRAMAN  PTGGAI
Subjt:  GELDSSQKSIVKMINDMSEDFRAALDVVRNEIADVSARVNLTMRAMANLTPTGGAI

TYK03099.1 reverse transcriptase [Cucumis melo var. makuwa]9.1e-4966.03Show/hide
Query:  MSIAKQMGKAYADRLVEIEKQILYLLEIPDTVRFLEGRIEEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKTT---RINYERGDSSTSSVAHVEERI
        MS +  +GKA  DRLVE+E+Q+LYL+E+PD++R+LE R+EE+SEK + IDAV GR++G PI+EL+TRVD LE        +NYERGDSST SVAH+EER+
Subjt:  MSIAKQMGKAYADRLVEIEKQILYLLEIPDTVRFLEGRIEEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKTT---RINYERGDSSTSSVAHVEERI

Query:  GELDSSQKSIVKMINDMSEDFRAALDVVRNEIADVSARVNLTMRAMANLTPTGGAI
         ELDSSQK++++MIN MSEDFRA LDVVRNEIADV+AR++LTMRAMAN  P GGAI
Subjt:  GELDSSQKSIVKMINDMSEDFRAALDVVRNEIADVSARVNLTMRAMANLTPTGGAI

TYK27261.1 uncharacterized protein E5676_scaffold244G00280 [Cucumis melo var. makuwa]1.2e-4867.31Show/hide
Query:  MSIAKQMGKAYADRLVEIEKQILYLLEIPDTVRFLEGRIEEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKTT---RINYERGDSSTSSVAHVEERI
        MS+A   G A  DRL E+E+Q+LYL E+PD++R+LE R+EE+SEKA  IDAV GR++GLPI+ELL RVDTLEA T     +NYERGDSS+  VAH+EER+
Subjt:  MSIAKQMGKAYADRLVEIEKQILYLLEIPDTVRFLEGRIEEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKTT---RINYERGDSSTSSVAHVEERI

Query:  GELDSSQKSIVKMINDMSEDFRAALDVVRNEIADVSARVNLTMRAMANLTPTGGAI
        GELDSSQK+++K+IN MSEDF   LDVVRNEIADV+AR+NLTMRAMAN  P GGAI
Subjt:  GELDSSQKSIVKMINDMSEDFRAALDVVRNEIADVSARVNLTMRAMANLTPTGGAI

TrEMBL top hitse value%identityAlignment
A0A5A7SKW3 Retrotrans_gag domain-containing protein7.5e-4966.03Show/hide
Query:  MSIAKQMGKAYADRLVEIEKQILYLLEIPDTVRFLEGRIEEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKTT---RINYERGDSSTSSVAHVEERI
        MS +   GKA  DRLVE+E+Q+LYL+E+PD++R+LE R+EE+ +K + IDAVTGR++G PI+EL+TRVD LE        +NYERGDSST SVAH+EER+
Subjt:  MSIAKQMGKAYADRLVEIEKQILYLLEIPDTVRFLEGRIEEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKTT---RINYERGDSSTSSVAHVEERI

Query:  GELDSSQKSIVKMINDMSEDFRAALDVVRNEIADVSARVNLTMRAMANLTPTGGAI
         ELDSSQK++++MIN MSEDFRA LDVVRNEIADV+AR+NLTMRAMAN  P GGAI
Subjt:  GELDSSQKSIVKMINDMSEDFRAALDVVRNEIADVSARVNLTMRAMANLTPTGGAI

A0A5A7UIP7 Reverse transcriptase3.4e-4966.67Show/hide
Query:  MSIAKQMGKAYADRLVEIEKQILYLLEIPDTVRFLEGRIEEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKTT---RINYERGDSSTSSVAHVEERI
        MS +   GKA  DRLVE+E+Q+LYL+E+PD++R+LE R+EE+SEK + IDAV GR++G PI+EL+TRVD LE        +NYERGDSST SVAH+EER+
Subjt:  MSIAKQMGKAYADRLVEIEKQILYLLEIPDTVRFLEGRIEEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKTT---RINYERGDSSTSSVAHVEERI

Query:  GELDSSQKSIVKMINDMSEDFRAALDVVRNEIADVSARVNLTMRAMANLTPTGGAI
         ELDSSQK++++MIN MSEDFRA LDVVRNEIADV+AR++LTMRAMAN  PTGGAI
Subjt:  GELDSSQKSIVKMINDMSEDFRAALDVVRNEIADVSARVNLTMRAMANLTPTGGAI

A0A5D3BYE6 Reverse transcriptase4.4e-4966.03Show/hide
Query:  MSIAKQMGKAYADRLVEIEKQILYLLEIPDTVRFLEGRIEEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKTT---RINYERGDSSTSSVAHVEERI
        MS +  +GKA  DRLVE+E+Q+LYL+E+PD++R+LE R+EE+SEK + IDAV GR++G PI+EL+TRVD LE        +NYERGDSST SVAH+EER+
Subjt:  MSIAKQMGKAYADRLVEIEKQILYLLEIPDTVRFLEGRIEEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKTT---RINYERGDSSTSSVAHVEERI

Query:  GELDSSQKSIVKMINDMSEDFRAALDVVRNEIADVSARVNLTMRAMANLTPTGGAI
         ELDSSQK++++MIN MSEDFRA LDVVRNEIADV+AR++LTMRAMAN  P GGAI
Subjt:  GELDSSQKSIVKMINDMSEDFRAALDVVRNEIADVSARVNLTMRAMANLTPTGGAI

A0A5D3C4R1 Reverse transcriptase9.8e-4966.03Show/hide
Query:  MSIAKQMGKAYADRLVEIEKQILYLLEIPDTVRFLEGRIEEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKTT---RINYERGDSSTSSVAHVEERI
        MS +   GKA  DRLVE+E+Q+LYL+E+PD++R+LE R+EE+SEK + IDAV GR++G PI+EL+TRVD LE        +NYERGDSST SVAH+EER+
Subjt:  MSIAKQMGKAYADRLVEIEKQILYLLEIPDTVRFLEGRIEEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKTT---RINYERGDSSTSSVAHVEERI

Query:  GELDSSQKSIVKMINDMSEDFRAALDVVRNEIADVSARVNLTMRAMANLTPTGGAI
         ELDSSQK++++MIN MSEDFRA LDVVRNEIADV+AR++LTMRAMAN  P GGAI
Subjt:  GELDSSQKSIVKMINDMSEDFRAALDVVRNEIADVSARVNLTMRAMANLTPTGGAI

A0A5D3DU93 Uncharacterized protein5.8e-4967.31Show/hide
Query:  MSIAKQMGKAYADRLVEIEKQILYLLEIPDTVRFLEGRIEEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKTT---RINYERGDSSTSSVAHVEERI
        MS+A   G A  DRL E+E+Q+LYL E+PD++R+LE R+EE+SEKA  IDAV GR++GLPI+ELL RVDTLEA T     +NYERGDSS+  VAH+EER+
Subjt:  MSIAKQMGKAYADRLVEIEKQILYLLEIPDTVRFLEGRIEEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKTT---RINYERGDSSTSSVAHVEERI

Query:  GELDSSQKSIVKMINDMSEDFRAALDVVRNEIADVSARVNLTMRAMANLTPTGGAI
        GELDSSQK+++K+IN MSEDF   LDVVRNEIADV+AR+NLTMRAMAN  P GGAI
Subjt:  GELDSSQKSIVKMINDMSEDFRAALDVVRNEIADVSARVNLTMRAMANLTPTGGAI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTATAGCGAAACAGATGGGCAAGGCCTACGCAGACCGATTGGTAGAGATCGAAAAGCAGATACTCTACCTGCTGGAAATTCCGGACACCGTCCGCTTCTTGGAAGG
TCGGATTGAGGAAGTGTCCGAGAAAGCTGACGCTATTGATGCGGTGACCGGTCGCCTCGACGGATTACCTATAAAGGAGTTGTTGACAAGAGTCGACACTTTAGAGGCAA
AGACTACAAGAATAAACTACGAGCGTGGGGACAGTTCAACGAGCTCTGTTGCCCACGTAGAGGAACGGATTGGCGAGCTAGATAGCTCCCAAAAGTCGATTGTCAAGATG
ATAAATGACATGTCAGAGGATTTTCGTGCCGCTCTTGACGTCGTCAGGAATGAGATCGCAGACGTGAGCGCGAGGGTGAACCTCACGATGCGAGCCATGGCAAACCTAAC
TCCAACTGGAGGAGCTATACTGAAGGAAAACCAAACATGTGCAGCGGAAGCAGAAACGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTATAGCGAAACAGATGGGCAAGGCCTACGCAGACCGATTGGTAGAGATCGAAAAGCAGATACTCTACCTGCTGGAAATTCCGGACACCGTCCGCTTCTTGGAAGG
TCGGATTGAGGAAGTGTCCGAGAAAGCTGACGCTATTGATGCGGTGACCGGTCGCCTCGACGGATTACCTATAAAGGAGTTGTTGACAAGAGTCGACACTTTAGAGGCAA
AGACTACAAGAATAAACTACGAGCGTGGGGACAGTTCAACGAGCTCTGTTGCCCACGTAGAGGAACGGATTGGCGAGCTAGATAGCTCCCAAAAGTCGATTGTCAAGATG
ATAAATGACATGTCAGAGGATTTTCGTGCCGCTCTTGACGTCGTCAGGAATGAGATCGCAGACGTGAGCGCGAGGGTGAACCTCACGATGCGAGCCATGGCAAACCTAAC
TCCAACTGGAGGAGCTATACTGAAGGAAAACCAAACATGTGCAGCGGAAGCAGAAACGTAA
Protein sequenceShow/hide protein sequence
MSIAKQMGKAYADRLVEIEKQILYLLEIPDTVRFLEGRIEEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKTTRINYERGDSSTSSVAHVEERIGELDSSQKSIVKM
INDMSEDFRAALDVVRNEIADVSARVNLTMRAMANLTPTGGAILKENQTCAAEAET