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PI0013197 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013197
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr06:10167439..10168091
RNA-Seq ExpressionPI0013197
SyntenyPI0013197
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR024752 - Myb/SANT-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK05082.1 retrotransposon protein [Cucumis melo var. makuwa]5.5e-6663.16Show/hide
Query:  MATSSRAPKHHWTKEEDVVLVECLVELVSSIGWRSDNGTFRPGYHSHLQKMIIKRMPGHNITATTINCRIKTMKRAFQAISEMRGPSCGGFSWNDELKCI
        MA+SSR PKH WTKEE+  LVECLVELV++ GWRSDNGTFRPGY + L +M+  ++PG NI A+TI+ RIK MKR F A++EMRGP+C GF WNDE KCI
Subjt:  MATSSRAPKHHWTKEEDVVLVECLVELVSSIGWRSDNGTFRPGYHSHLQKMIIKRMPGHNITATTINCRIKTMKRAFQAISEMRGPSCGGFSWNDELKCI

Query:  IAEKHLYDSWVKSHLVAKGLLNKLFPYYDDLCYVLERDRATGGRAETFDDVGSNVPPGFEGFPHYDRNDMEIPTMYSQGLDMSPDDIMGT
        + EK L+D WVKSH  AKGLLNK F +YD+L YV  +DRATGGRAE+F D+GSN PPG++        D + P MYS GL+MSPDD+M T
Subjt:  IAEKHLYDSWVKSHLVAKGLLNKLFPYYDDLCYVLERDRATGGRAETFDDVGSNVPPGFEGFPHYDRNDMEIPTMYSQGLDMSPDDIMGT

TYK15304.1 retrotransposon protein [Cucumis melo var. makuwa]1.2e-6562.63Show/hide
Query:  MATSSRAPKHHWTKEEDVVLVECLVELVSSIGWRSDNGTFRPGYHSHLQKMIIKRMPGHNITATTINCRIKTMKRAFQAISEMRGPSCGGFSWNDELKCI
        M +SSR PKH WTKEE+  LVECLVELV++ GWRSDNGTF P Y + L +M+  ++PG NI A+TI+ RIK MKR F A++EMRGP+C GF WNDE KCI
Subjt:  MATSSRAPKHHWTKEEDVVLVECLVELVSSIGWRSDNGTFRPGYHSHLQKMIIKRMPGHNITATTINCRIKTMKRAFQAISEMRGPSCGGFSWNDELKCI

Query:  IAEKHLYDSWVKSHLVAKGLLNKLFPYYDDLCYVLERDRATGGRAETFDDVGSNVPPGFEGFPHYDRNDMEIPTMYSQGLDMSPDDIMGT
        + EK ++D WVKSH VAKGLLNK FP+YD+  YV  +DRATGGRA++F DVGSN P G++ F      D + P MYSQGL+MSPDD+MGT
Subjt:  IAEKHLYDSWVKSHLVAKGLLNKLFPYYDDLCYVLERDRATGGRAETFDDVGSNVPPGFEGFPHYDRNDMEIPTMYSQGLDMSPDDIMGT

XP_008441954.1 PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo]2.7e-6562.3Show/hide
Query:  MATSSRAPKHHWTKEEDVVLVECLVELVSSIGWRSDNGTFRPGYHSHLQKMIIKRMPGHNI-TATTINCRIKTMKRAFQAISEMRGPSCGGFSWNDELKC
        MA+ SRAPKH WTKEE+   VECLVELVSS GWRSDNGTF+PGY + LQ+M+ +++PG NI  ++TI+C +K++K+ + AI+EMRGPSC GF WN+E +C
Subjt:  MATSSRAPKHHWTKEEDVVLVECLVELVSSIGWRSDNGTFRPGYHSHLQKMIIKRMPGHNI-TATTINCRIKTMKRAFQAISEMRGPSCGGFSWNDELKC

Query:  IIAEKHLYDSWVKSHLVAKGLLNKLFPYYDDLCYVLERDRATGGRAETFDDVGSNVPPGF-EGFPHYDRNDMEIPTMYSQGLDMSPDDIMG
        IIAE+ L+DSW+KSH  AKGLL+K FPYYDDL YV  +DRATG R+ETF +VGSNV   F +  P  D +D +IPTMYSQG+ MSPD++ G
Subjt:  IIAEKHLYDSWVKSHLVAKGLLNKLFPYYDDLCYVLERDRATGGRAETFDDVGSNVPPGF-EGFPHYDRNDMEIPTMYSQGLDMSPDDIMG

XP_031742657.1 uncharacterized protein LOC116404426 [Cucumis sativus]1.7e-6764.89Show/hide
Query:  MATSSRAPKHHWTKEEDVVLVECLVELVSSIGWRSDNGTFRPGYHSHLQKMIIKRMPGHNITATT-INCRIKTMKRAFQAISEMRGPSCGGFSWNDELKC
        M +SSRAPKH WTKEE+  LVEC+V+LVS+  W+SDNGTFRPGY + L +M++ ++PG N+ ATT I+ RIKT+KR++QAI+EMRGPSC GF WND+ KC
Subjt:  MATSSRAPKHHWTKEEDVVLVECLVELVSSIGWRSDNGTFRPGYHSHLQKMIIKRMPGHNITATT-INCRIKTMKRAFQAISEMRGPSCGGFSWNDELKC

Query:  IIAEKHLYDSWVKSHLVAKGLLNKLFPYYDDLCYVLERDRATGGRAETFDDVGSNVPPGFEGFPHYDRNDMEIPTMYSQGLDMSPDDI
        IIAEK  +D+WV+SH  AKGLLNK FPYYD   YV  +DRA G   ETF DVGSNVPPGFE FP  D+NDMEIP+M S   +MS DDI
Subjt:  IIAEKHLYDSWVKSHLVAKGLLNKLFPYYDDLCYVLERDRATGGRAETFDDVGSNVPPGFEGFPHYDRNDMEIPTMYSQGLDMSPDDI

XP_031743896.1 uncharacterized protein LOC116404722 [Cucumis sativus]1.5e-6864.36Show/hide
Query:  MATSSRAPKHHWTKEEDVVLVECLVELVSSIGWRSDNGTFRPGYHSHLQKMIIKRMPGHNITATT-INCRIKTMKRAFQAISEMRGPSCGGFSWNDELKC
        M  SS APKH W KEE+  LVEC+VE VS+ GW+SDNGTFRPGY + L +M+  ++PG N+  TT I+C IKT+KR++QAI+EM  PSC GF WND+ KC
Subjt:  MATSSRAPKHHWTKEEDVVLVECLVELVSSIGWRSDNGTFRPGYHSHLQKMIIKRMPGHNITATT-INCRIKTMKRAFQAISEMRGPSCGGFSWNDELKC

Query:  IIAEKHLYDSWVKSHLVAKGLLNKLFPYYDDLCYVLERDRATGGRAETFDDVGSNVPPGFEGFPHYDRNDMEIPTMYSQGLDMSPDDI
        I+AEK L+D+WV+SHL AKGLLNK FPYYD L Y+  +DRATG  AETF DVGSNVPPGFE FPH D NDM+IP+M+S   +MS DDI
Subjt:  IIAEKHLYDSWVKSHLVAKGLLNKLFPYYDDLCYVLERDRATGGRAETFDDVGSNVPPGFEGFPHYDRNDMEIPTMYSQGLDMSPDDI

TrEMBL top hitse value%identityAlignment
A0A1S3B4L3 uncharacterized protein LOC1034859531.3e-6562.3Show/hide
Query:  MATSSRAPKHHWTKEEDVVLVECLVELVSSIGWRSDNGTFRPGYHSHLQKMIIKRMPGHNI-TATTINCRIKTMKRAFQAISEMRGPSCGGFSWNDELKC
        MA+ SRAPKH WTKEE+   VECLVELVSS GWRSDNGTF+PGY + LQ+M+ +++PG NI  ++TI+C +K++K+ + AI+EMRGPSC GF WN+E +C
Subjt:  MATSSRAPKHHWTKEEDVVLVECLVELVSSIGWRSDNGTFRPGYHSHLQKMIIKRMPGHNI-TATTINCRIKTMKRAFQAISEMRGPSCGGFSWNDELKC

Query:  IIAEKHLYDSWVKSHLVAKGLLNKLFPYYDDLCYVLERDRATGGRAETFDDVGSNVPPGF-EGFPHYDRNDMEIPTMYSQGLDMSPDDIMG
        IIAE+ L+DSW+KSH  AKGLL+K FPYYDDL YV  +DRATG R+ETF +VGSNV   F +  P  D +D +IPTMYSQG+ MSPD++ G
Subjt:  IIAEKHLYDSWVKSHLVAKGLLNKLFPYYDDLCYVLERDRATGGRAETFDDVGSNVPPGF-EGFPHYDRNDMEIPTMYSQGLDMSPDDIMG

A0A5A7U098 Retrotransposon protein1.3e-6562.63Show/hide
Query:  MATSSRAPKHHWTKEEDVVLVECLVELVSSIGWRSDNGTFRPGYHSHLQKMIIKRMPGHNITATTINCRIKTMKRAFQAISEMRGPSCGGFSWNDELKCI
        MA+SSR PKH WTKEE+  LVECLVELV++ GWRSDNGTFRPGY + L +M+  ++PG NI A+TI+ RIK MKR F A++EMRGP+C GF WNDE KCI
Subjt:  MATSSRAPKHHWTKEEDVVLVECLVELVSSIGWRSDNGTFRPGYHSHLQKMIIKRMPGHNITATTINCRIKTMKRAFQAISEMRGPSCGGFSWNDELKCI

Query:  IAEKHLYDSWVKSHLVAKGLLNKLFPYYDDLCYVLERDRATGGRAETFDDVGSNVPPGFEGFPHYDRNDMEIPTMYSQGLDMSPDDIMGT
        + EK L+D WVKSH +AKGLLNK F +YD+L YV  +DRATGGRAE+F D+GSN P G++ F      D     MYS GL+MSPDD+M T
Subjt:  IAEKHLYDSWVKSHLVAKGLLNKLFPYYDDLCYVLERDRATGGRAETFDDVGSNVPPGFEGFPHYDRNDMEIPTMYSQGLDMSPDDIMGT

A0A5A7U0H7 Retrotransposon protein1.3e-6562.3Show/hide
Query:  MATSSRAPKHHWTKEEDVVLVECLVELVSSIGWRSDNGTFRPGYHSHLQKMIIKRMPGHNI-TATTINCRIKTMKRAFQAISEMRGPSCGGFSWNDELKC
        MA+ SRAPKH WTKEE+   VECLVELVSS GWRSDNGTF+PGY + LQ+M+ +++PG NI  ++TI+C +K++K+ + AI+EMRGPSC GF WN+E +C
Subjt:  MATSSRAPKHHWTKEEDVVLVECLVELVSSIGWRSDNGTFRPGYHSHLQKMIIKRMPGHNI-TATTINCRIKTMKRAFQAISEMRGPSCGGFSWNDELKC

Query:  IIAEKHLYDSWVKSHLVAKGLLNKLFPYYDDLCYVLERDRATGGRAETFDDVGSNVPPGF-EGFPHYDRNDMEIPTMYSQGLDMSPDDIMG
        IIAE+ L+DSW+KSH  AKGLL+K FPYYDDL YV  +DRATG R+ETF +VGSNV   F +  P  D +D +IPTMYSQG+ MSPD++ G
Subjt:  IIAEKHLYDSWVKSHLVAKGLLNKLFPYYDDLCYVLERDRATGGRAETFDDVGSNVPPGF-EGFPHYDRNDMEIPTMYSQGLDMSPDDIMG

A0A5D3C1M0 Retrotransposon protein2.7e-6663.16Show/hide
Query:  MATSSRAPKHHWTKEEDVVLVECLVELVSSIGWRSDNGTFRPGYHSHLQKMIIKRMPGHNITATTINCRIKTMKRAFQAISEMRGPSCGGFSWNDELKCI
        MA+SSR PKH WTKEE+  LVECLVELV++ GWRSDNGTFRPGY + L +M+  ++PG NI A+TI+ RIK MKR F A++EMRGP+C GF WNDE KCI
Subjt:  MATSSRAPKHHWTKEEDVVLVECLVELVSSIGWRSDNGTFRPGYHSHLQKMIIKRMPGHNITATTINCRIKTMKRAFQAISEMRGPSCGGFSWNDELKCI

Query:  IAEKHLYDSWVKSHLVAKGLLNKLFPYYDDLCYVLERDRATGGRAETFDDVGSNVPPGFEGFPHYDRNDMEIPTMYSQGLDMSPDDIMGT
        + EK L+D WVKSH  AKGLLNK F +YD+L YV  +DRATGGRAE+F D+GSN PPG++        D + P MYS GL+MSPDD+M T
Subjt:  IAEKHLYDSWVKSHLVAKGLLNKLFPYYDDLCYVLERDRATGGRAETFDDVGSNVPPGFEGFPHYDRNDMEIPTMYSQGLDMSPDDIMGT

A0A5D3CWJ7 Retrotransposon protein5.9e-6662.63Show/hide
Query:  MATSSRAPKHHWTKEEDVVLVECLVELVSSIGWRSDNGTFRPGYHSHLQKMIIKRMPGHNITATTINCRIKTMKRAFQAISEMRGPSCGGFSWNDELKCI
        M +SSR PKH WTKEE+  LVECLVELV++ GWRSDNGTF P Y + L +M+  ++PG NI A+TI+ RIK MKR F A++EMRGP+C GF WNDE KCI
Subjt:  MATSSRAPKHHWTKEEDVVLVECLVELVSSIGWRSDNGTFRPGYHSHLQKMIIKRMPGHNITATTINCRIKTMKRAFQAISEMRGPSCGGFSWNDELKCI

Query:  IAEKHLYDSWVKSHLVAKGLLNKLFPYYDDLCYVLERDRATGGRAETFDDVGSNVPPGFEGFPHYDRNDMEIPTMYSQGLDMSPDDIMGT
        + EK ++D WVKSH VAKGLLNK FP+YD+  YV  +DRATGGRA++F DVGSN P G++ F      D + P MYSQGL+MSPDD+MGT
Subjt:  IAEKHLYDSWVKSHLVAKGLLNKLFPYYDDLCYVLERDRATGGRAETFDDVGSNVPPGFEGFPHYDRNDMEIPTMYSQGLDMSPDDIMGT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACTTCTTCAAGGGCCCCGAAGCACCACTGGACGAAAGAGGAGGATGTCGTCCTCGTTGAATGTCTGGTGGAGTTGGTATCATCCATCGGGTGGAGGTCGGATAA
CGGGACGTTTAGACCCGGATACCATAGTCATCTACAGAAAATGATTATCAAGAGGATGCCGGGACATAACATAACGGCTACGACAATAAATTGTCGAATTAAGACAATGA
AAAGAGCATTCCAAGCGATATCTGAAATGAGGGGCCCATCGTGTGGTGGGTTCAGTTGGAATGATGAGCTGAAATGCATCATTGCCGAGAAACACTTGTATGACAGTTGG
GTCAAGAGTCATCTAGTCGCAAAGGGCCTCCTAAACAAACTCTTTCCCTACTACGACGACCTTTGCTACGTCTTGGAAAGAGATCGTGCAACAGGAGGTCGAGCTGAAAC
CTTCGACGATGTTGGGTCAAACGTGCCTCCAGGCTTCGAAGGATTTCCGCACTATGACAGGAACGATATGGAGATCCCGACGATGTATAGTCAGGGCCTGGACATGTCAC
CTGACGACATAATGGGTACATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAACTTCTTCAAGGGCCCCGAAGCACCACTGGACGAAAGAGGAGGATGTCGTCCTCGTTGAATGTCTGGTGGAGTTGGTATCATCCATCGGGTGGAGGTCGGATAA
CGGGACGTTTAGACCCGGATACCATAGTCATCTACAGAAAATGATTATCAAGAGGATGCCGGGACATAACATAACGGCTACGACAATAAATTGTCGAATTAAGACAATGA
AAAGAGCATTCCAAGCGATATCTGAAATGAGGGGCCCATCGTGTGGTGGGTTCAGTTGGAATGATGAGCTGAAATGCATCATTGCCGAGAAACACTTGTATGACAGTTGG
GTCAAGAGTCATCTAGTCGCAAAGGGCCTCCTAAACAAACTCTTTCCCTACTACGACGACCTTTGCTACGTCTTGGAAAGAGATCGTGCAACAGGAGGTCGAGCTGAAAC
CTTCGACGATGTTGGGTCAAACGTGCCTCCAGGCTTCGAAGGATTTCCGCACTATGACAGGAACGATATGGAGATCCCGACGATGTATAGTCAGGGCCTGGACATGTCAC
CTGACGACATAATGGGTACATGA
Protein sequenceShow/hide protein sequence
MATSSRAPKHHWTKEEDVVLVECLVELVSSIGWRSDNGTFRPGYHSHLQKMIIKRMPGHNITATTINCRIKTMKRAFQAISEMRGPSCGGFSWNDELKCIIAEKHLYDSW
VKSHLVAKGLLNKLFPYYDDLCYVLERDRATGGRAETFDDVGSNVPPGFEGFPHYDRNDMEIPTMYSQGLDMSPDDIMGT