; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0013201 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013201
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTubulin alpha chain
Genome locationchr07:254927..259661
RNA-Seq ExpressionPI0013201
SyntenyPI0013201
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576903.1 hypothetical protein SDJN03_24477, partial [Cucurbita argyrosperma subsp. sororia]1.8e-9786.49Show/hide
Query:  MAALQILKSTLSLPSISHPNFGSQSTRFFSEFDS----LLLHGRRRSLRYACVCRRFSFRCAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNN
        MA LQILKST+S PSIS P FGSQS+RFFSE DS     LLHGRRRSLRY CV RR SFRCAA+D+DKESNGEEPPESLFMKELKKRGITPTSLLEDT+N
Subjt:  MAALQILKSTLSLPSISHPNFGSQSTRFFSEFDS----LLLHGRRRSLRYACVCRRFSFRCAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNN

Query:  SDFGLGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGASFIHDG-KTPISPP
        +DFGLGGEM GENRDFSRRSAVSTEV+KSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLI++TVSFFF LYFF G SF+HDG KTPISPP
Subjt:  SDFGLGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGASFIHDG-KTPISPP

Query:  PYVDPYALLEDERISQIAPPVN
        PYVDPYALLEDERISQ+AP VN
Subjt:  PYVDPYALLEDERISQIAPPVN

XP_004150271.1 uncharacterized protein LOC101221726 [Cucumis sativus]3.3e-10794.47Show/hide
Query:  MAALQILKSTLSLPSISHPNFGSQSTRFFSEFDSLLLHGRRRSLRYACVCRRFSFRCAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNNSDFG
        MAALQILKS+LSLPSISH NFGSQSTRF S+FDSLLLHGRRRSLRYACV RRF+FRCAAKD DKE+NGEEPPESLFMKELKKRGITPTSLLEDTN+SDF 
Subjt:  MAALQILKSTLSLPSISHPNFGSQSTRFFSEFDSLLLHGRRRSLRYACVCRRFSFRCAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNNSDFG

Query:  LGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGASFIHDGKTPISPPPYVDP
        LGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFF GASFIHDG+TPISPPPYVDP
Subjt:  LGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGASFIHDGKTPISPPPYVDP

Query:  YALLEDERISQIAPPVN
        YALLEDERISQIAPPVN
Subjt:  YALLEDERISQIAPPVN

XP_008454422.1 PREDICTED: uncharacterized protein LOC103494832 [Cucumis melo]6.8e-11398.16Show/hide
Query:  MAALQILKSTLSLPSISHPNFGSQSTRFFSEFDSLLLHGRRRSLRYACVCRRFSFRCAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNNSDFG
        MA+LQILKSTLSLPSISHPNFGSQSTRFFS+FDSLLLHGRRRSLR ACVCRRFSFRCAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNNSDFG
Subjt:  MAALQILKSTLSLPSISHPNFGSQSTRFFSEFDSLLLHGRRRSLRYACVCRRFSFRCAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNNSDFG

Query:  LGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGASFIHDGKTPISPPPYVDP
        LGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFG+SFIHDGKTPISPPPYVDP
Subjt:  LGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGASFIHDGKTPISPPPYVDP

Query:  YALLEDERISQIAPPVN
        YALLEDERISQIAPPVN
Subjt:  YALLEDERISQIAPPVN

XP_022984914.1 uncharacterized protein LOC111483048 [Cucurbita maxima]1.1e-9786.49Show/hide
Query:  MAALQILKSTLSLPSISHPNFGSQSTRFFSEFDS----LLLHGRRRSLRYACVCRRFSFRCAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNN
        MA LQILKST+S PSIS P FGSQS+RFFSE DS    +LLHGRRRSLRY CV RR SFRCAA+D+DKESNGEEPPESLFMKELKKRGITPTSLLEDT+N
Subjt:  MAALQILKSTLSLPSISHPNFGSQSTRFFSEFDS----LLLHGRRRSLRYACVCRRFSFRCAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNN

Query:  SDFGLGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGASFIHDG-KTPISPP
        +DFGLGGEM GENRDFSRRSAVSTEV+KSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLI++TVSFFF LYFF G SF+HDG KTPISPP
Subjt:  SDFGLGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGASFIHDG-KTPISPP

Query:  PYVDPYALLEDERISQIAPPVN
        PYVDPYALLEDERISQ+AP VN
Subjt:  PYVDPYALLEDERISQIAPPVN

XP_038905067.1 uncharacterized protein LOC120091218 isoform X1 [Benincasa hispida]7.8e-10189.19Show/hide
Query:  MAALQILKSTLSLPSISHPNFGSQSTRFFSEFDS----LLLHGRRRSLRYACVCRRFSFRCAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNN
        MAALQILKST+S PSIS PNFG QS+RFFS+ DS    +LLHGRRRSLRY CVCRR SFRCAA+DADK+SNGEEPPESLFMKELKKRGITPTSLLEDTNN
Subjt:  MAALQILKSTLSLPSISHPNFGSQSTRFFSEFDS----LLLHGRRRSLRYACVCRRFSFRCAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNN

Query:  SDFGLGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGASFIHDG-KTPISPP
        SDFGLGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFF LYFFFGASF+HDG +T ISPP
Subjt:  SDFGLGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGASFIHDG-KTPISPP

Query:  PYVDPYALLEDERISQIAPPVN
         YVDPYALLE+ERISQ APPVN
Subjt:  PYVDPYALLEDERISQIAPPVN

TrEMBL top hitse value%identityAlignment
A0A0A0KY14 Uncharacterized protein1.6e-10794.47Show/hide
Query:  MAALQILKSTLSLPSISHPNFGSQSTRFFSEFDSLLLHGRRRSLRYACVCRRFSFRCAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNNSDFG
        MAALQILKS+LSLPSISH NFGSQSTRF S+FDSLLLHGRRRSLRYACV RRF+FRCAAKD DKE+NGEEPPESLFMKELKKRGITPTSLLEDTN+SDF 
Subjt:  MAALQILKSTLSLPSISHPNFGSQSTRFFSEFDSLLLHGRRRSLRYACVCRRFSFRCAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNNSDFG

Query:  LGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGASFIHDGKTPISPPPYVDP
        LGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFF GASFIHDG+TPISPPPYVDP
Subjt:  LGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGASFIHDGKTPISPPPYVDP

Query:  YALLEDERISQIAPPVN
        YALLEDERISQIAPPVN
Subjt:  YALLEDERISQIAPPVN

A0A1S3BY38 uncharacterized protein LOC1034948323.3e-11398.16Show/hide
Query:  MAALQILKSTLSLPSISHPNFGSQSTRFFSEFDSLLLHGRRRSLRYACVCRRFSFRCAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNNSDFG
        MA+LQILKSTLSLPSISHPNFGSQSTRFFS+FDSLLLHGRRRSLR ACVCRRFSFRCAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNNSDFG
Subjt:  MAALQILKSTLSLPSISHPNFGSQSTRFFSEFDSLLLHGRRRSLRYACVCRRFSFRCAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNNSDFG

Query:  LGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGASFIHDGKTPISPPPYVDP
        LGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFG+SFIHDGKTPISPPPYVDP
Subjt:  LGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGASFIHDGKTPISPPPYVDP

Query:  YALLEDERISQIAPPVN
        YALLEDERISQIAPPVN
Subjt:  YALLEDERISQIAPPVN

A0A6J1D5D9 uncharacterized protein LOC1110177631.1e-9583.71Show/hide
Query:  MAALQILKSTLSLPSISHPNFGSQSTRFFSEFDS----LLLHGRRRSLRYACVCRRFSFRCAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNN
        MAALQ+LKS +S  SIS PNFG +S+RF S+ DS    +  HGRRRSLRY CVCRR SFRCAA+DADKESNGEEPPESLFMKELKKRG+TPTSLLED+N+
Subjt:  MAALQILKSTLSLPSISHPNFGSQSTRFFSEFDS----LLLHGRRRSLRYACVCRRFSFRCAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNN

Query:  SDFGLGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGASFIHDGKTPISPPP
        +DFGLGGEMTGE RDFS RSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLI+ITVSFFF LYFFFG SF+H+G+TPISPPP
Subjt:  SDFGLGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGASFIHDGKTPISPPP

Query:  YVDPYALLEDERISQIAPPVN
        YVDPYALLEDERISQ AP VN
Subjt:  YVDPYALLEDERISQIAPPVN

A0A6J1E457 uncharacterized protein LOC1114306402.0e-9786.04Show/hide
Query:  MAALQILKSTLSLPSISHPNFGSQSTRFFSEFDS----LLLHGRRRSLRYACVCRRFSFRCAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNN
        MA LQILKST+S PSIS P FGSQS+RFFSE DS     LLHGRRRSLRY CV RR SFRCAA+D+DKESNGEEPPESLFMKELKKRGITPTSLLEDT+N
Subjt:  MAALQILKSTLSLPSISHPNFGSQSTRFFSEFDS----LLLHGRRRSLRYACVCRRFSFRCAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNN

Query:  SDFGLGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGASFIHDG-KTPISPP
        +DFGLGGEM GENRDFSRRSAVSTEV+KSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLI++TVSFFF LYFF G SF+HDG KTPISPP
Subjt:  SDFGLGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGASFIHDG-KTPISPP

Query:  PYVDPYALLEDERISQIAPPVN
        PYVDPYALLEDER+SQ+AP VN
Subjt:  PYVDPYALLEDERISQIAPPVN

A0A6J1JBV1 uncharacterized protein LOC1114830485.1e-9886.49Show/hide
Query:  MAALQILKSTLSLPSISHPNFGSQSTRFFSEFDS----LLLHGRRRSLRYACVCRRFSFRCAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNN
        MA LQILKST+S PSIS P FGSQS+RFFSE DS    +LLHGRRRSLRY CV RR SFRCAA+D+DKESNGEEPPESLFMKELKKRGITPTSLLEDT+N
Subjt:  MAALQILKSTLSLPSISHPNFGSQSTRFFSEFDS----LLLHGRRRSLRYACVCRRFSFRCAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNN

Query:  SDFGLGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGASFIHDG-KTPISPP
        +DFGLGGEM GENRDFSRRSAVSTEV+KSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLI++TVSFFF LYFF G SF+HDG KTPISPP
Subjt:  SDFGLGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGASFIHDG-KTPISPP

Query:  PYVDPYALLEDERISQIAPPVN
        PYVDPYALLEDERISQ+AP VN
Subjt:  PYVDPYALLEDERISQIAPPVN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G50020.1 unknown protein7.4e-4963.58Show/hide
Query:  AAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTN-NSDFGLGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGG
        A    D +S GEEPPESLFMKELK+RG+TPTSLL+D   + D    G+ TG +   S+ +A +   +KSL NQRERS+ LNSEGLEGLIPRA++LLTIGG
Subjt:  AAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTN-NSDFGLGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGG

Query:  TFFLGFWPLIIITVSFFFGLYFFFGASFIHDG-KTPISPPPYVDPYALLEDERISQIAPPVN
        TFFLGFWPLI++T+  F  LY +FGA FIHDG +TP+SPPPY+DPYALLEDERIS + P +N
Subjt:  TFFLGFWPLIIITVSFFFGLYFFFGASFIHDG-KTPISPPPYVDPYALLEDERISQIAPPVN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCTCTTCAAATTCTCAAATCAACTCTCTCTCTTCCTTCCATCTCTCACCCGAATTTTGGCTCTCAATCAACCCGCTTCTTCTCGGAGTTTGATTCCCTACTGCT
CCATGGACGTCGGAGGAGTTTGCGTTATGCCTGCGTTTGTAGAAGGTTCAGTTTCCGTTGCGCTGCTAAAGATGCTGATAAGGAAAGCAATGGAGAAGAACCTCCAGAAT
CATTATTCATGAAGGAACTGAAGAAGAGAGGTATAACTCCCACTTCCTTACTTGAGGATACTAACAACAGTGACTTTGGACTTGGTGGCGAGATGACTGGAGAAAACAGA
GATTTCTCCCGTAGAAGTGCTGTTTCAACTGAAGTTAACAAGAGCCTATCCAATCAAAGGGAGCGTTCCATGCAATTGAACAGTGAAGGCCTTGAGGGGTTGATCCCTCG
TGCTAAACTTTTGCTAACAATTGGAGGAACGTTCTTCTTAGGATTCTGGCCGTTGATCATCATAACTGTTTCGTTCTTTTTTGGTTTATACTTTTTTTTCGGAGCCTCTT
TTATTCATGATGGCAAAACGCCAATATCTCCTCCACCGTATGTTGACCCATATGCTCTTTTAGAGGACGAGAGAATTTCACAAATAGCTCCTCCTGTAAATTGA
mRNA sequenceShow/hide mRNA sequence
CTTTAATCGTCGCCTCCTGGCCTCCGCTTGCGTTTCATTTTGTTTTTGTTATTTTTTGTGGAAAAATTAAGATGAAACTATTTCTCCCATTGAATTCCGCTATCTAATCA
ATCTATGGCTGCTCTTCAAATTCTCAAATCAACTCTCTCTCTTCCTTCCATCTCTCACCCGAATTTTGGCTCTCAATCAACCCGCTTCTTCTCGGAGTTTGATTCCCTAC
TGCTCCATGGACGTCGGAGGAGTTTGCGTTATGCCTGCGTTTGTAGAAGGTTCAGTTTCCGTTGCGCTGCTAAAGATGCTGATAAGGAAAGCAATGGAGAAGAACCTCCA
GAATCATTATTCATGAAGGAACTGAAGAAGAGAGGTATAACTCCCACTTCCTTACTTGAGGATACTAACAACAGTGACTTTGGACTTGGTGGCGAGATGACTGGAGAAAA
CAGAGATTTCTCCCGTAGAAGTGCTGTTTCAACTGAAGTTAACAAGAGCCTATCCAATCAAAGGGAGCGTTCCATGCAATTGAACAGTGAAGGCCTTGAGGGGTTGATCC
CTCGTGCTAAACTTTTGCTAACAATTGGAGGAACGTTCTTCTTAGGATTCTGGCCGTTGATCATCATAACTGTTTCGTTCTTTTTTGGTTTATACTTTTTTTTCGGAGCC
TCTTTTATTCATGATGGCAAAACGCCAATATCTCCTCCACCGTATGTTGACCCATATGCTCTTTTAGAGGACGAGAGAATTTCACAAATAGCTCCTCCTGTAAATTGACT
GCTGCATAATCCTAATTGGTTGGTTTTCTGCTACTTTGTTTCTGCTATGATATGTAAATGATTATTAGCTAGAATTTCATGGTCTTGTGCCTATTTTATTTCTTGAAGTC
TTTAGTTTTTTTTCTTTGACAATATGTGGAGGTGGGGTATCGAATCTCTGACCTCAAAGTTGATAGTACAAGCTGTAAAACCTTCAATCATTTACACGTATGAAAAGGGG
GAAAAGGGGGAAAAGCTGTTGAAGAAAGGACGTAGGGATGTGGCAAATTTGATTACAAGCCGTGGGGACCATTCGGCAGGGGGTTTATGCACGGTTTTGGGATGTTCTGT
GGAGGTGTGGAGAATTTGGAGGTTGAGAAAGCTTTTGGGAGAGGGAGGCACTCTCAAATCAGTCCTTATCGTCTTGTTTCATTTTGATTGTAATTGCTCTGTTTTTCTTG
TTTTAGAGATATCGTAATAAATATTGTTGTCCTTTGGTTGTTTTTTATTATTGAATATCAAAGATGAGGGAGTTTTCCCCTATTTTCGTCCTTGTTGGATATTTTTCTGT
GTGCAGGAATTAAGGATACCTAAGGAATTGGTACGAAAGTCTATGTTGAATTTTGGAAGAATGAGAAAAATGGCGTTGAAATAGACGGAAGGTAGTTGGAATCCCATGAG
GAGATAAGGGGATGGAAGGAAATGGTGTTTGGATGTGCCAGAACTTGAATCGGACAATAAAAGACTGATTTGAGAGCGCCTCCATCTCCCAAAAGCTTTCTCAACATCTC
CATAGGACATACCAAAACCCTACATAAACCCCCCCGCCAAATTGTCGCCACGACAATGTAACTGAAATTGCCATGTACCTACATCCCTTCTTCAACCGCTTTCTCCTTTT
TACCCTTCTCTCATATGTGCGAATAATGGGCTAAAGTAGTTACACAAGCTTATGTCTATAGAGCTGCATGCAAATTAACTCTTACAACATGTTTGGGGTTAAAGTGTGGA
GTGGAGTTGAATGGAATGGACCGTAATAATCAACCCCCTTTTTTCTGGAG
Protein sequenceShow/hide protein sequence
MAALQILKSTLSLPSISHPNFGSQSTRFFSEFDSLLLHGRRRSLRYACVCRRFSFRCAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNNSDFGLGGEMTGENR
DFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGASFIHDGKTPISPPPYVDPYALLEDERISQIAPPVN