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PI0013217 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013217
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr04:21599706..21600409
RNA-Seq ExpressionPI0013217
SyntenyPI0013217
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047075.1 retrotransposon protein [Cucumis melo var. makuwa]7.3e-5051.67Show/hide
Query:  MAERMPRHNITTSTIDCRIKTMKREFQAISKMRDPSCSGFGWNNELKCIIAEKDLYDNLVKSHLVAKGLLNKPFLHYDDLCYVFGRDRATGGHAETFVDV
        MA ++P  NI  STID RIK MKR F A+++MR P+CSGFGWN+E KCI+ EK+L+D+ VKSH +AKGLLNK F+HYD+L YVFG+DRATGG AE+F D+
Subjt:  MAERMPRHNITTSTIDCRIKTMKREFQAISKMRDPSCSGFGWNNELKCIIAEKDLYDNLVKSHLVAKGLLNKPFLHYDDLCYVFGRDRATGGHAETFVDV

Query:  GSNVPARYDGFPAYDGNDMEFPTMYSQRLDMGFERFKE----------------ETRRAG--IQMAEIIRSSMEYVNDQLKAIAKWPKEQRQDASVTRAE
        GSN PA YD F A    D  F  MYS  L+M  +   E                + +R G      +I+ +++EY N+QL  IA+WP  QRQDAS TR E
Subjt:  GSNVPARYDGFPAYDGNDMEFPTMYSQRLDMGFERFKE----------------ETRRAG--IQMAEIIRSSMEYVNDQLKAIAKWPKEQRQDASVTRAE

Query:  VVKQLQGIP
        +V+QL+ IP
Subjt:  VVKQLQGIP

KAA0050782.1 retrotransposon protein [Cucumis melo var. makuwa]5.9e-5253.33Show/hide
Query:  MAERMPRHNITTSTIDCRIKTMKREFQAISKMRDPSCSGFGWNNELKCIIAEKDLYDNLVKSHLVAKGLLNKPFLHYDDLCYVFGRDRATGGHAETFVDV
        MA ++P  NI  STID RIK MKR F A++ MRDP+CSGFGWN+E KCIIAEK+++D+ VKSH  AKGLLNK F+HYD+L YVFG+DRATGG AE+F D+
Subjt:  MAERMPRHNITTSTIDCRIKTMKREFQAISKMRDPSCSGFGWNNELKCIIAEKDLYDNLVKSHLVAKGLLNKPFLHYDDLCYVFGRDRATGGHAETFVDV

Query:  GSNVPARYDGFPAYDGNDMEFPTMYSQRLDMGFERFKEETRRAGI-------------------QMAEIIRSSMEYVNDQLKAIAKWPKEQRQDASVTRA
        GSN PA YD F A    D +FP MYS  L+M  +    ETR A +                      +I+R+++EY N+QL  IA+WP  QRQDA+ TR 
Subjt:  GSNVPARYDGFPAYDGNDMEFPTMYSQRLDMGFERFKEETRRAGI-------------------QMAEIIRSSMEYVNDQLKAIAKWPKEQRQDASVTRA

Query:  EVVKQLQGIP
        E+V+QL+ IP
Subjt:  EVVKQLQGIP

KAA0066570.1 retrotransposon protein [Cucumis melo var. makuwa]3.5e-5257.07Show/hide
Query:  MAERMPRHNITTSTIDCRIKTMKREFQAISKMRDPSCSGFGWNNELKCIIAEKDLYDNLVKSHLVAKGLLNKPFLHYDDLCYVFGRDRATGGHAETFVDV
        MA ++P  NI  STID RIK MKR F A+++MR P+CSGFGWN+E KCI+  K+++D+ VKSH VAKGLLNK F HYD+  YVFG+DRATGG A++F DV
Subjt:  MAERMPRHNITTSTIDCRIKTMKREFQAISKMRDPSCSGFGWNNELKCIIAEKDLYDNLVKSHLVAKGLLNKPFLHYDDLCYVFGRDRATGGHAETFVDV

Query:  GSNVPARYDGFPAYDGNDMEFPTMYSQRLDMGFERFKEETRRAGIQMAEIIRSSMEYVNDQLKAIAKWPKEQRQDASVTRAEVVKQLQGIP
        GSN PA YD F A    D +FP MYSQ L+M  +     TR A +   +I+ +++EY N+QL  IA+WP  QRQDAS TR EVV+QL+ IP
Subjt:  GSNVPARYDGFPAYDGNDMEFPTMYSQRLDMGFERFKEETRRAGIQMAEIIRSSMEYVNDQLKAIAKWPKEQRQDASVTRAEVVKQLQGIP

TYK05082.1 retrotransposon protein [Cucumis melo var. makuwa]7.3e-5051.9Show/hide
Query:  MAERMPRHNITTSTIDCRIKTMKREFQAISKMRDPSCSGFGWNNELKCIIAEKDLYDNLVKSHLVAKGLLNKPFLHYDDLCYVFGRDRATGGHAETFVDV
        MA ++P  NI  STID RIK MKR F A+++MR P+CSGFGWN+E KCI+ EK+L+D+ VKSH  AKGLLNK F+HYD+L YVFG+DRATGG AE+F D+
Subjt:  MAERMPRHNITTSTIDCRIKTMKREFQAISKMRDPSCSGFGWNNELKCIIAEKDLYDNLVKSHLVAKGLLNKPFLHYDDLCYVFGRDRATGGHAETFVDV

Query:  GSNVPARYDGFPAYDGNDMEFPTMYSQRLDMGFERFKEETRRAGI-------------------QMAEIIRSSMEYVNDQLKAIAKWPKEQRQDASVTRA
        GSN P  YD   A    D +FP MYS  L+M  +    ETR A +                      +I+R+++EY N+QL  IA+WP  QRQDAS TR 
Subjt:  GSNVPARYDGFPAYDGNDMEFPTMYSQRLDMGFERFKEETRRAGI-------------------QMAEIIRSSMEYVNDQLKAIAKWPKEQRQDASVTRA

Query:  EVVKQLQGIP
        E+V+QL+ IP
Subjt:  EVVKQLQGIP

TYK15304.1 retrotransposon protein [Cucumis melo var. makuwa]4.5e-5256.54Show/hide
Query:  MAERMPRHNITTSTIDCRIKTMKREFQAISKMRDPSCSGFGWNNELKCIIAEKDLYDNLVKSHLVAKGLLNKPFLHYDDLCYVFGRDRATGGHAETFVDV
        MA ++P  NI  STID RIK MKR F A+++MR P+CSGFGWN+E KCI+ EK+++D+ VKSH VAKGLLNK F HYD+  YVFG+DRATGG A++F DV
Subjt:  MAERMPRHNITTSTIDCRIKTMKREFQAISKMRDPSCSGFGWNNELKCIIAEKDLYDNLVKSHLVAKGLLNKPFLHYDDLCYVFGRDRATGGHAETFVDV

Query:  GSNVPARYDGFPAYDGNDMEFPTMYSQRLDMGFERFKEETRRAGIQMAEIIRSSMEYVNDQLKAIAKWPKEQRQDASVTRAEVVKQLQGIP
        GSN P  YD F A    D +FP MYSQ L+M  +     TR   +   +I+ +++EY N+QL  IA+WP  QRQDAS TR EVV+QL+ IP
Subjt:  GSNVPARYDGFPAYDGNDMEFPTMYSQRLDMGFERFKEETRRAGIQMAEIIRSSMEYVNDQLKAIAKWPKEQRQDASVTRAEVVKQLQGIP

TrEMBL top hitse value%identityAlignment
A0A5A7U098 Retrotransposon protein3.5e-5051.67Show/hide
Query:  MAERMPRHNITTSTIDCRIKTMKREFQAISKMRDPSCSGFGWNNELKCIIAEKDLYDNLVKSHLVAKGLLNKPFLHYDDLCYVFGRDRATGGHAETFVDV
        MA ++P  NI  STID RIK MKR F A+++MR P+CSGFGWN+E KCI+ EK+L+D+ VKSH +AKGLLNK F+HYD+L YVFG+DRATGG AE+F D+
Subjt:  MAERMPRHNITTSTIDCRIKTMKREFQAISKMRDPSCSGFGWNNELKCIIAEKDLYDNLVKSHLVAKGLLNKPFLHYDDLCYVFGRDRATGGHAETFVDV

Query:  GSNVPARYDGFPAYDGNDMEFPTMYSQRLDMGFERFKE----------------ETRRAG--IQMAEIIRSSMEYVNDQLKAIAKWPKEQRQDASVTRAE
        GSN PA YD F A    D  F  MYS  L+M  +   E                + +R G      +I+ +++EY N+QL  IA+WP  QRQDAS TR E
Subjt:  GSNVPARYDGFPAYDGNDMEFPTMYSQRLDMGFERFKE----------------ETRRAG--IQMAEIIRSSMEYVNDQLKAIAKWPKEQRQDASVTRAE

Query:  VVKQLQGIP
        +V+QL+ IP
Subjt:  VVKQLQGIP

A0A5A7U4M2 Retrotransposon protein2.9e-5253.33Show/hide
Query:  MAERMPRHNITTSTIDCRIKTMKREFQAISKMRDPSCSGFGWNNELKCIIAEKDLYDNLVKSHLVAKGLLNKPFLHYDDLCYVFGRDRATGGHAETFVDV
        MA ++P  NI  STID RIK MKR F A++ MRDP+CSGFGWN+E KCIIAEK+++D+ VKSH  AKGLLNK F+HYD+L YVFG+DRATGG AE+F D+
Subjt:  MAERMPRHNITTSTIDCRIKTMKREFQAISKMRDPSCSGFGWNNELKCIIAEKDLYDNLVKSHLVAKGLLNKPFLHYDDLCYVFGRDRATGGHAETFVDV

Query:  GSNVPARYDGFPAYDGNDMEFPTMYSQRLDMGFERFKEETRRAGI-------------------QMAEIIRSSMEYVNDQLKAIAKWPKEQRQDASVTRA
        GSN PA YD F A    D +FP MYS  L+M  +    ETR A +                      +I+R+++EY N+QL  IA+WP  QRQDA+ TR 
Subjt:  GSNVPARYDGFPAYDGNDMEFPTMYSQRLDMGFERFKEETRRAGI-------------------QMAEIIRSSMEYVNDQLKAIAKWPKEQRQDASVTRA

Query:  EVVKQLQGIP
        E+V+QL+ IP
Subjt:  EVVKQLQGIP

A0A5A7VHC6 Retrotransposon protein1.7e-5257.07Show/hide
Query:  MAERMPRHNITTSTIDCRIKTMKREFQAISKMRDPSCSGFGWNNELKCIIAEKDLYDNLVKSHLVAKGLLNKPFLHYDDLCYVFGRDRATGGHAETFVDV
        MA ++P  NI  STID RIK MKR F A+++MR P+CSGFGWN+E KCI+  K+++D+ VKSH VAKGLLNK F HYD+  YVFG+DRATGG A++F DV
Subjt:  MAERMPRHNITTSTIDCRIKTMKREFQAISKMRDPSCSGFGWNNELKCIIAEKDLYDNLVKSHLVAKGLLNKPFLHYDDLCYVFGRDRATGGHAETFVDV

Query:  GSNVPARYDGFPAYDGNDMEFPTMYSQRLDMGFERFKEETRRAGIQMAEIIRSSMEYVNDQLKAIAKWPKEQRQDASVTRAEVVKQLQGIP
        GSN PA YD F A    D +FP MYSQ L+M  +     TR A +   +I+ +++EY N+QL  IA+WP  QRQDAS TR EVV+QL+ IP
Subjt:  GSNVPARYDGFPAYDGNDMEFPTMYSQRLDMGFERFKEETRRAGIQMAEIIRSSMEYVNDQLKAIAKWPKEQRQDASVTRAEVVKQLQGIP

A0A5D3C1M0 Retrotransposon protein3.5e-5051.9Show/hide
Query:  MAERMPRHNITTSTIDCRIKTMKREFQAISKMRDPSCSGFGWNNELKCIIAEKDLYDNLVKSHLVAKGLLNKPFLHYDDLCYVFGRDRATGGHAETFVDV
        MA ++P  NI  STID RIK MKR F A+++MR P+CSGFGWN+E KCI+ EK+L+D+ VKSH  AKGLLNK F+HYD+L YVFG+DRATGG AE+F D+
Subjt:  MAERMPRHNITTSTIDCRIKTMKREFQAISKMRDPSCSGFGWNNELKCIIAEKDLYDNLVKSHLVAKGLLNKPFLHYDDLCYVFGRDRATGGHAETFVDV

Query:  GSNVPARYDGFPAYDGNDMEFPTMYSQRLDMGFERFKEETRRAGI-------------------QMAEIIRSSMEYVNDQLKAIAKWPKEQRQDASVTRA
        GSN P  YD   A    D +FP MYS  L+M  +    ETR A +                      +I+R+++EY N+QL  IA+WP  QRQDAS TR 
Subjt:  GSNVPARYDGFPAYDGNDMEFPTMYSQRLDMGFERFKEETRRAGI-------------------QMAEIIRSSMEYVNDQLKAIAKWPKEQRQDASVTRA

Query:  EVVKQLQGIP
        E+V+QL+ IP
Subjt:  EVVKQLQGIP

A0A5D3CWJ7 Retrotransposon protein2.2e-5256.54Show/hide
Query:  MAERMPRHNITTSTIDCRIKTMKREFQAISKMRDPSCSGFGWNNELKCIIAEKDLYDNLVKSHLVAKGLLNKPFLHYDDLCYVFGRDRATGGHAETFVDV
        MA ++P  NI  STID RIK MKR F A+++MR P+CSGFGWN+E KCI+ EK+++D+ VKSH VAKGLLNK F HYD+  YVFG+DRATGG A++F DV
Subjt:  MAERMPRHNITTSTIDCRIKTMKREFQAISKMRDPSCSGFGWNNELKCIIAEKDLYDNLVKSHLVAKGLLNKPFLHYDDLCYVFGRDRATGGHAETFVDV

Query:  GSNVPARYDGFPAYDGNDMEFPTMYSQRLDMGFERFKEETRRAGIQMAEIIRSSMEYVNDQLKAIAKWPKEQRQDASVTRAEVVKQLQGIP
        GSN P  YD F A    D +FP MYSQ L+M  +     TR   +   +I+ +++EY N+QL  IA+WP  QRQDAS TR EVV+QL+ IP
Subjt:  GSNVPARYDGFPAYDGNDMEFPTMYSQRLDMGFERFKEETRRAGIQMAEIIRSSMEYVNDQLKAIAKWPKEQRQDASVTRAEVVKQLQGIP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGAGAGGATGCCAAGACATAACATAACGACTTCGACCATTGATTGTCGAATAAAGACTATGAAAAGAGAGTTCCAAGCCATATCTAAAATGAGGGATCCATCGTG
CAGTGGGTTCGGTTGGAACAATGAGCTCAAATGCATCATTGCCGAGAAAGACTTGTACGATAATTTGGTGAAGAGTCATCTAGTAGCAAAGGGCCTCCTAAACAAACCAT
TTCTCCATTACGACGACCTTTGCTACGTCTTTGGAAGAGATCGTGCAACAGGAGGTCACGCTGAAACCTTTGTCGATGTTGGGTCAAACGTGCCTGCAAGGTACGATGGA
TTTCCCGCTTATGACGGGAATGATATGGAGTTCCCCACGATGTACAGTCAGAGACTGGACATGGGGTTCGAGCGGTTCAAAGAGGAAACAAGGAGGGCAGGCATTCAGAT
GGCAGAAATTATTCGCAGTTCCATGGAATATGTGAATGACCAGCTGAAAGCCATTGCAAAATGGCCCAAAGAACAACGCCAAGATGCAAGCGTGACACGTGCAGAAGTCG
TTAAACAACTACAGGGAATCCCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGAGAGGATGCCAAGACATAACATAACGACTTCGACCATTGATTGTCGAATAAAGACTATGAAAAGAGAGTTCCAAGCCATATCTAAAATGAGGGATCCATCGTG
CAGTGGGTTCGGTTGGAACAATGAGCTCAAATGCATCATTGCCGAGAAAGACTTGTACGATAATTTGGTGAAGAGTCATCTAGTAGCAAAGGGCCTCCTAAACAAACCAT
TTCTCCATTACGACGACCTTTGCTACGTCTTTGGAAGAGATCGTGCAACAGGAGGTCACGCTGAAACCTTTGTCGATGTTGGGTCAAACGTGCCTGCAAGGTACGATGGA
TTTCCCGCTTATGACGGGAATGATATGGAGTTCCCCACGATGTACAGTCAGAGACTGGACATGGGGTTCGAGCGGTTCAAAGAGGAAACAAGGAGGGCAGGCATTCAGAT
GGCAGAAATTATTCGCAGTTCCATGGAATATGTGAATGACCAGCTGAAAGCCATTGCAAAATGGCCCAAAGAACAACGCCAAGATGCAAGCGTGACACGTGCAGAAGTCG
TTAAACAACTACAGGGAATCCCATAG
Protein sequenceShow/hide protein sequence
MAERMPRHNITTSTIDCRIKTMKREFQAISKMRDPSCSGFGWNNELKCIIAEKDLYDNLVKSHLVAKGLLNKPFLHYDDLCYVFGRDRATGGHAETFVDVGSNVPARYDG
FPAYDGNDMEFPTMYSQRLDMGFERFKEETRRAGIQMAEIIRSSMEYVNDQLKAIAKWPKEQRQDASVTRAEVVKQLQGIP