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PI0013240 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013240
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr12:19312106..19313737
RNA-Seq ExpressionPI0013240
SyntenyPI0013240
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034014.1 uncharacterized protein E6C27_scaffold400G00820 [Cucumis melo var. makuwa]8.2e-6467.93Show/hide
Query:  MNTMFSIALSFPNMVHLYVTVSKIDLGINLNVESRPVEEYVDVDPKSDAQPVCGEEEMVANNEYRDFRTETDDEFEEMEFDGHEHEFPSNTFTELDMNAA
        MNTMFSIAL FPNMVHLYVTVS +D  INLNVE R VEEYVDV+P+SDA PVC EEEMVA NEY +FRTETDDEFEEM+FDG E+E PSNTFT+LDMNA 
Subjt:  MNTMFSIALSFPNMVHLYVTVSKIDLGINLNVESRPVEEYVDVDPKSDAQPVCGEEEMVANNEYRDFRTETDDEFEEMEFDGHEHEFPSNTFTELDMNAA

Query:  DSVREHDPIIVPVVTDNMELYKGMIYEDKETLQHLVKCFSIKIHAPYEVVESTPTKWWTQAHDGGFRYDWMTNNLSECMNGVLK
        D+++EHDPIIVP+VTDN +LY GMI E+KE +QH+VKCF+IK HAPYEVVESTPTKW  +         W    + +  +G+ +
Subjt:  DSVREHDPIIVPVVTDNMELYKGMIYEDKETLQHLVKCFSIKIHAPYEVVESTPTKWWTQAHDGGFRYDWMTNNLSECMNGVLK

KAA0036768.1 uncharacterized protein E6C27_scaffold20G00510 [Cucumis melo var. makuwa]1.2e-6267.93Show/hide
Query:  MNTMFSIALSFPNMVHLYVTVSKIDLGINLNVESRPVEEYVDVDPKSDAQPVCGEEEMVANNEYRDFRTETDDEFEEMEFDGHEHEFPSNTFTELDMNAA
        MNTMFSIALSFPNMVHLYVTVS +D  INLNVE R VEEYVDV+P+SDA  VC EEEMVA NEY +FRTETDDEFEEM+FDG E+E PSNTFT+LDMNA 
Subjt:  MNTMFSIALSFPNMVHLYVTVSKIDLGINLNVESRPVEEYVDVDPKSDAQPVCGEEEMVANNEYRDFRTETDDEFEEMEFDGHEHEFPSNTFTELDMNAA

Query:  DSVREHDPIIVPVVTDNMELYKGMIYEDKETLQHLVKCFSIKIHAPYEVVESTPTKWWTQAHDGGFRYDWMTNNLSECMNGVLK
        D ++EHDPIIVP+VTDN +LY GMI E+K+ LQH+VKCF+IK HAPYEVVESTPTKW  +         W    + +  +G+ +
Subjt:  DSVREHDPIIVPVVTDNMELYKGMIYEDKETLQHLVKCFSIKIHAPYEVVESTPTKWWTQAHDGGFRYDWMTNNLSECMNGVLK

KAA0040476.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]7.1e-6844.66Show/hide
Query:  MNTMFSIALSFPNMVHLYVTVSKIDLGINLNVESRPVEEYVDVDPKSDAQPVCGEEEMVANNEYRDFRTETDDEFEEMEFDGHEHEFPSNTFTELDMNAA
        MNTMFSI L F NMVHLYVTVS +D  INLNVE R VEEYVDV+P+S+A PVC EEEMVA NEY +FRTETDDEFEEM+FDG E+E PSN FT+LDMNA 
Subjt:  MNTMFSIALSFPNMVHLYVTVSKIDLGINLNVESRPVEEYVDVDPKSDAQPVCGEEEMVANNEYRDFRTETDDEFEEMEFDGHEHEFPSNTFTELDMNAA

Query:  DSVREHDPIIVPVVTDNMELYKGMIYEDKETLQHLVKCFSIKIHAPYEVVESTPTKW------------W-----------------------------T
        D ++EHDPIIVP+VTDN +LY GMI E+KE LQH++KCF+IK HAPYEVVESTPTKW            W                             +
Subjt:  DSVREHDPIIVPVVTDNMELYKGMIYEDKETLQHLVKCFSIKIHAPYEVVESTPTKW------------W-----------------------------T

Query:  QAH--------------------------------------------------------------------------------------------DGG--
        Q+H                                                                                            D G  
Subjt:  QAH--------------------------------------------------------------------------------------------DGG--

Query:  -------------------FRYDWMTNNLSECMNGVLKGAQMLPINALAQITFFKCVNYFEKRKE
                           FRY WMT NLSECMNGV KGA+MLPINA+AQITFFKCV+YFEKR+E
Subjt:  -------------------FRYDWMTNNLSECMNGVLKGAQMLPINALAQITFFKCVNYFEKRKE

KAA0047926.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.4e-6248.61Show/hide
Query:  MNTMFSIALSFPNMVHLYVTVSKIDLGINLNVESRPVEEYVDVDPKSDAQPVCGEEEMVANNEYRDFRTETDDEFEEMEFDGHEHEFPSNTFTELDMNAA
        MNTMFSIAL FPNMVHLYVT+S +DL INLN E + VEEYVDVD + DA PVC EEEMVA NEY +FRTETDDEFEE++F+G E+E PSNTFT+LDM+  
Subjt:  MNTMFSIALSFPNMVHLYVTVSKIDLGINLNVESRPVEEYVDVDPKSDAQPVCGEEEMVANNEYRDFRTETDDEFEEMEFDGHEHEFPSNTFTELDMNAA

Query:  DSVREHDPIIVPVVTDNMELYKGMIYEDKETLQHLVKCFSIKIHAPYEVVESTPTKW-------------------------------------------
        D ++E DPIIV +VTDN +LY GMI E+KE LQH+VKCF+IK HAPYEVVESTPTKW                                           
Subjt:  DSVREHDPIIVPVVTDNMELYKGMIYEDKETLQHLVKCFSIKIHAPYEVVESTPTKW-------------------------------------------

Query:  ---------------------------------------------------WTQAHDGGFRYDWMTNNLSECMNGVLKGAQMLPINAL
                                                           WTQAHDGGF Y WMT NLSECMNGV K A+M  +  +
Subjt:  ---------------------------------------------------WTQAHDGGFRYDWMTNNLSECMNGVLKGAQMLPINAL

TYJ95836.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]3.7e-6436.72Show/hide
Query:  MNTMFSIALSFPNMVHLYVTVSKIDLGINLNVESRPVEEYVDVDPKSDAQPVCGEEEMVANNEYRDFRTETDDEFEEMEFDGHEHEFPSNTFTELDMNAA
        MNTMFSIAL FPNMVHLYVTVS +D  INLNVE R VEEYVDV+P+SDA PVC EEEMVA NEY +FRTETDDEFEEM+FDG E+E PSNTFT+LDMNA 
Subjt:  MNTMFSIALSFPNMVHLYVTVSKIDLGINLNVESRPVEEYVDVDPKSDAQPVCGEEEMVANNEYRDFRTETDDEFEEMEFDGHEHEFPSNTFTELDMNAA

Query:  DSVREHDPIIVPVVTDNMELYKGMIYEDKETLQHLVKCFSIKIHAPYEVVESTPTKW-------------------------------------------
        D ++EHDPIIVP+VTDN +LY GMI E+K+ LQH+VKCF+IK HAPYEVVESTPTKW                                           
Subjt:  DSVREHDPIIVPVVTDNMELYKGMIYEDKETLQHLVKCFSIKIHAPYEVVESTPTKW-------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------WTQAHDGGFRYDWMTNNLSECMNGVLKGAQMLPINALAQITFFKCVNYFEKRKE
                 WTQAHDGGFRY WMT NLSECMNGV KGA+MLPINA+AQITFFKCV+YFEKR+E
Subjt:  ---------WTQAHDGGFRYDWMTNNLSECMNGVLKGAQMLPINALAQITFFKCVNYFEKRKE

TrEMBL top hitse value%identityAlignment
A0A5A7SS31 DBD_Tnp_Mut domain-containing protein4.0e-6467.93Show/hide
Query:  MNTMFSIALSFPNMVHLYVTVSKIDLGINLNVESRPVEEYVDVDPKSDAQPVCGEEEMVANNEYRDFRTETDDEFEEMEFDGHEHEFPSNTFTELDMNAA
        MNTMFSIAL FPNMVHLYVTVS +D  INLNVE R VEEYVDV+P+SDA PVC EEEMVA NEY +FRTETDDEFEEM+FDG E+E PSNTFT+LDMNA 
Subjt:  MNTMFSIALSFPNMVHLYVTVSKIDLGINLNVESRPVEEYVDVDPKSDAQPVCGEEEMVANNEYRDFRTETDDEFEEMEFDGHEHEFPSNTFTELDMNAA

Query:  DSVREHDPIIVPVVTDNMELYKGMIYEDKETLQHLVKCFSIKIHAPYEVVESTPTKWWTQAHDGGFRYDWMTNNLSECMNGVLK
        D+++EHDPIIVP+VTDN +LY GMI E+KE +QH+VKCF+IK HAPYEVVESTPTKW  +         W    + +  +G+ +
Subjt:  DSVREHDPIIVPVVTDNMELYKGMIYEDKETLQHLVKCFSIKIHAPYEVVESTPTKWWTQAHDGGFRYDWMTNNLSECMNGVLK

A0A5A7T1X8 SWIM-type domain-containing protein5.7e-6367.93Show/hide
Query:  MNTMFSIALSFPNMVHLYVTVSKIDLGINLNVESRPVEEYVDVDPKSDAQPVCGEEEMVANNEYRDFRTETDDEFEEMEFDGHEHEFPSNTFTELDMNAA
        MNTMFSIALSFPNMVHLYVTVS +D  INLNVE R VEEYVDV+P+SDA  VC EEEMVA NEY +FRTETDDEFEEM+FDG E+E PSNTFT+LDMNA 
Subjt:  MNTMFSIALSFPNMVHLYVTVSKIDLGINLNVESRPVEEYVDVDPKSDAQPVCGEEEMVANNEYRDFRTETDDEFEEMEFDGHEHEFPSNTFTELDMNAA

Query:  DSVREHDPIIVPVVTDNMELYKGMIYEDKETLQHLVKCFSIKIHAPYEVVESTPTKWWTQAHDGGFRYDWMTNNLSECMNGVLK
        D ++EHDPIIVP+VTDN +LY GMI E+K+ LQH+VKCF+IK HAPYEVVESTPTKW  +         W    + +  +G+ +
Subjt:  DSVREHDPIIVPVVTDNMELYKGMIYEDKETLQHLVKCFSIKIHAPYEVVESTPTKWWTQAHDGGFRYDWMTNNLSECMNGVLK

A0A5A7U115 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.7e-6248.61Show/hide
Query:  MNTMFSIALSFPNMVHLYVTVSKIDLGINLNVESRPVEEYVDVDPKSDAQPVCGEEEMVANNEYRDFRTETDDEFEEMEFDGHEHEFPSNTFTELDMNAA
        MNTMFSIAL FPNMVHLYVT+S +DL INLN E + VEEYVDVD + DA PVC EEEMVA NEY +FRTETDDEFEE++F+G E+E PSNTFT+LDM+  
Subjt:  MNTMFSIALSFPNMVHLYVTVSKIDLGINLNVESRPVEEYVDVDPKSDAQPVCGEEEMVANNEYRDFRTETDDEFEEMEFDGHEHEFPSNTFTELDMNAA

Query:  DSVREHDPIIVPVVTDNMELYKGMIYEDKETLQHLVKCFSIKIHAPYEVVESTPTKW-------------------------------------------
        D ++E DPIIV +VTDN +LY GMI E+KE LQH+VKCF+IK HAPYEVVESTPTKW                                           
Subjt:  DSVREHDPIIVPVVTDNMELYKGMIYEDKETLQHLVKCFSIKIHAPYEVVESTPTKW-------------------------------------------

Query:  ---------------------------------------------------WTQAHDGGFRYDWMTNNLSECMNGVLKGAQMLPINAL
                                                           WTQAHDGGF Y WMT NLSECMNGV K A+M  +  +
Subjt:  ---------------------------------------------------WTQAHDGGFRYDWMTNNLSECMNGVLKGAQMLPINAL

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein1.8e-6436.72Show/hide
Query:  MNTMFSIALSFPNMVHLYVTVSKIDLGINLNVESRPVEEYVDVDPKSDAQPVCGEEEMVANNEYRDFRTETDDEFEEMEFDGHEHEFPSNTFTELDMNAA
        MNTMFSIAL FPNMVHLYVTVS +D  INLNVE R VEEYVDV+P+SDA PVC EEEMVA NEY +FRTETDDEFEEM+FDG E+E PSNTFT+LDMNA 
Subjt:  MNTMFSIALSFPNMVHLYVTVSKIDLGINLNVESRPVEEYVDVDPKSDAQPVCGEEEMVANNEYRDFRTETDDEFEEMEFDGHEHEFPSNTFTELDMNAA

Query:  DSVREHDPIIVPVVTDNMELYKGMIYEDKETLQHLVKCFSIKIHAPYEVVESTPTKW-------------------------------------------
        D ++EHDPIIVP+VTDN +LY GMI E+K+ LQH+VKCF+IK HAPYEVVESTPTKW                                           
Subjt:  DSVREHDPIIVPVVTDNMELYKGMIYEDKETLQHLVKCFSIKIHAPYEVVESTPTKW-------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------WTQAHDGGFRYDWMTNNLSECMNGVLKGAQMLPINALAQITFFKCVNYFEKRKE
                 WTQAHDGGFRY WMT NLSECMNGV KGA+MLPINA+AQITFFKCV+YFEKR+E
Subjt:  ---------WTQAHDGGFRYDWMTNNLSECMNGVLKGAQMLPINALAQITFFKCVNYFEKRKE

A0A5D3DIM2 Serine/threonine-protein phosphatase 7 long form-like protein3.5e-6844.66Show/hide
Query:  MNTMFSIALSFPNMVHLYVTVSKIDLGINLNVESRPVEEYVDVDPKSDAQPVCGEEEMVANNEYRDFRTETDDEFEEMEFDGHEHEFPSNTFTELDMNAA
        MNTMFSI L F NMVHLYVTVS +D  INLNVE R VEEYVDV+P+S+A PVC EEEMVA NEY +FRTETDDEFEEM+FDG E+E PSN FT+LDMNA 
Subjt:  MNTMFSIALSFPNMVHLYVTVSKIDLGINLNVESRPVEEYVDVDPKSDAQPVCGEEEMVANNEYRDFRTETDDEFEEMEFDGHEHEFPSNTFTELDMNAA

Query:  DSVREHDPIIVPVVTDNMELYKGMIYEDKETLQHLVKCFSIKIHAPYEVVESTPTKW------------W-----------------------------T
        D ++EHDPIIVP+VTDN +LY GMI E+KE LQH++KCF+IK HAPYEVVESTPTKW            W                             +
Subjt:  DSVREHDPIIVPVVTDNMELYKGMIYEDKETLQHLVKCFSIKIHAPYEVVESTPTKW------------W-----------------------------T

Query:  QAH--------------------------------------------------------------------------------------------DGG--
        Q+H                                                                                            D G  
Subjt:  QAH--------------------------------------------------------------------------------------------DGG--

Query:  -------------------FRYDWMTNNLSECMNGVLKGAQMLPINALAQITFFKCVNYFEKRKE
                           FRY WMT NLSECMNGV KGA+MLPINA+AQITFFKCV+YFEKR+E
Subjt:  -------------------FRYDWMTNNLSECMNGVLKGAQMLPINALAQITFFKCVNYFEKRKE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACACTATGTTTTCAATTGCACTATCGTTTCCGAATATGGTGCATTTGTACGTGACTGTGAGTAAGATAGATTTGGGCATCAACTTAAATGTAGAATCACGACCAGT
TGAAGAATATGTTGATGTTGATCCGAAGTCAGATGCACAACCAGTGTGCGGTGAAGAAGAAATGGTAGCTAATAATGAGTATAGAGACTTTAGAACAGAAACTGATGATG
AATTTGAAGAGATGGAATTTGATGGTCATGAACATGAATTTCCCTCAAATACATTCACTGAGTTGGACATGAATGCAGCAGATAGCGTTCGTGAGCACGATCCAATTATA
GTCCCAGTGGTGACCGACAACATGGAATTGTATAAAGGAATGATTTATGAAGACAAAGAAACACTACAACATTTGGTCAAGTGTTTTTCTATTAAGATTCACGCACCATA
TGAAGTAGTCGAGTCAACACCGACAAAGTGGTGGACTCAAGCACATGATGGGGGATTTCGGTATGACTGGATGACGAATAACCTATCAGAGTGCATGAACGGAGTCCTCA
AAGGAGCTCAAATGTTGCCGATAAATGCTCTAGCTCAAATTACATTCTTCAAATGTGTGAATTACTTTGAAAAAAGGAAAGAAAATAAGAGTCGTCAGAACGTCGACATA
AATACACCGGGTATGGATTTTTCATATTTACAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACACTATGTTTTCAATTGCACTATCGTTTCCGAATATGGTGCATTTGTACGTGACTGTGAGTAAGATAGATTTGGGCATCAACTTAAATGTAGAATCACGACCAGT
TGAAGAATATGTTGATGTTGATCCGAAGTCAGATGCACAACCAGTGTGCGGTGAAGAAGAAATGGTAGCTAATAATGAGTATAGAGACTTTAGAACAGAAACTGATGATG
AATTTGAAGAGATGGAATTTGATGGTCATGAACATGAATTTCCCTCAAATACATTCACTGAGTTGGACATGAATGCAGCAGATAGCGTTCGTGAGCACGATCCAATTATA
GTCCCAGTGGTGACCGACAACATGGAATTGTATAAAGGAATGATTTATGAAGACAAAGAAACACTACAACATTTGGTCAAGTGTTTTTCTATTAAGATTCACGCACCATA
TGAAGTAGTCGAGTCAACACCGACAAAGTGGTGGACTCAAGCACATGATGGGGGATTTCGGTATGACTGGATGACGAATAACCTATCAGAGTGCATGAACGGAGTCCTCA
AAGGAGCTCAAATGTTGCCGATAAATGCTCTAGCTCAAATTACATTCTTCAAATGTGTGAATTACTTTGAAAAAAGGAAAGAAAATAAGAGTCGTCAGAACGTCGACATA
AATACACCGGGTATGGATTTTTCATATTTACAGTAG
Protein sequenceShow/hide protein sequence
MNTMFSIALSFPNMVHLYVTVSKIDLGINLNVESRPVEEYVDVDPKSDAQPVCGEEEMVANNEYRDFRTETDDEFEEMEFDGHEHEFPSNTFTELDMNAADSVREHDPII
VPVVTDNMELYKGMIYEDKETLQHLVKCFSIKIHAPYEVVESTPTKWWTQAHDGGFRYDWMTNNLSECMNGVLKGAQMLPINALAQITFFKCVNYFEKRKENKSRQNVDI
NTPGMDFSYLQ