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PI0013275 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013275
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr05:18524721..18524885
RNA-Seq ExpressionPI0013275
SyntenyPI0013275
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060531.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]3.2e-1164.15Show/hide
Query:  MKNADVIDDVDEGDSIYATTRGDDIQYVESSDEWSKWRDDKAKEMFNEWQLRN
        M NAD+  D+DEGDS YATT GDDI Y+E+S++W +W+DD AKE+F+EW LRN
Subjt:  MKNADVIDDVDEGDSIYATTRGDDIQYVESSDEWSKWRDDKAKEMFNEWQLRN

TYK00771.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]3.2e-1164.15Show/hide
Query:  MKNADVIDDVDEGDSIYATTRGDDIQYVESSDEWSKWRDDKAKEMFNEWQLRN
        M NAD+  D+DEGDS YATT GDDI Y+E+S++W +W+DD AKE+F+EW LRN
Subjt:  MKNADVIDDVDEGDSIYATTRGDDIQYVESSDEWSKWRDDKAKEMFNEWQLRN

TYK10663.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]7.1e-1164.81Show/hide
Query:  MKNADVIDDVDEGDSIYATTRGDDIQYVESSDEWSKWRDDKAKEMFNEWQLRNQ
        MKN D+ D++DE DS +ATT  DDI Y+E+S+EWS+WRDD A+EMF EW+LRNQ
Subjt:  MKNADVIDDVDEGDSIYATTRGDDIQYVESSDEWSKWRDDKAKEMFNEWQLRNQ

XP_031740445.1 uncharacterized protein LOC116403439 [Cucumis sativus]5.8e-1370.37Show/hide
Query:  MKNADVIDDVDEGDSIYATTRGDDIQYVESSDEWSKWRDDKAKEMFNEWQLRNQ
        M N   +DDVDEGDS YAT  GDDIQ+VE+S+EW++WRDD A EMFNEWQLRN+
Subjt:  MKNADVIDDVDEGDSIYATTRGDDIQYVESSDEWSKWRDDKAKEMFNEWQLRNQ

XP_031741750.1 protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like [Cucumis sativus]1.1e-1168.52Show/hide
Query:  MKNADVIDDVDEGDSIYATTRGDDIQYVESSDEWSKWRDDKAKEMFNEWQLRNQ
        M N D +DDVDEGDS YAT  GDDIQ+VE+S+EW++ RDD A EMFNEWQL N+
Subjt:  MKNADVIDDVDEGDSIYATTRGDDIQYVESSDEWSKWRDDKAKEMFNEWQLRNQ

TrEMBL top hitse value%identityAlignment
A0A5A7TZC3 Putative nuclease HARBI13.5e-1164.81Show/hide
Query:  MKNADVIDDVDEGDSIYATTRGDDIQYVESSDEWSKWRDDKAKEMFNEWQLRNQ
        MKN D+ D++DE DS +ATT  DDI Y+E+S+EWS+WRDD A+EMF EW+LRNQ
Subjt:  MKNADVIDDVDEGDSIYATTRGDDIQYVESSDEWSKWRDDKAKEMFNEWQLRNQ

A0A5A7V485 Putative nuclease HARBI11.5e-1164.15Show/hide
Query:  MKNADVIDDVDEGDSIYATTRGDDIQYVESSDEWSKWRDDKAKEMFNEWQLRN
        M NAD+  D+DEGDS YATT GDDI Y+E+S++W +W+DD AKE+F+EW LRN
Subjt:  MKNADVIDDVDEGDSIYATTRGDDIQYVESSDEWSKWRDDKAKEMFNEWQLRN

A0A5D3BLS5 Putative nuclease HARBI11.5e-1164.15Show/hide
Query:  MKNADVIDDVDEGDSIYATTRGDDIQYVESSDEWSKWRDDKAKEMFNEWQLRN
        M NAD+  D+DEGDS YATT GDDI Y+E+S++W +W+DD AKE+F+EW LRN
Subjt:  MKNADVIDDVDEGDSIYATTRGDDIQYVESSDEWSKWRDDKAKEMFNEWQLRN

A0A5D3CFJ2 Putative nuclease HARBI13.5e-1164.81Show/hide
Query:  MKNADVIDDVDEGDSIYATTRGDDIQYVESSDEWSKWRDDKAKEMFNEWQLRNQ
        MKN D+ D++DE DS +ATT  DDI Y+E+S+EWS+WRDD A+EMF EW+LRNQ
Subjt:  MKNADVIDDVDEGDSIYATTRGDDIQYVESSDEWSKWRDDKAKEMFNEWQLRNQ

A0A5D3DV38 Retrotransposon protein3.5e-1162.96Show/hide
Query:  MKNADVIDDVDEGDSIYATTRGDDIQYVESSDEWSKWRDDKAKEMFNEWQLRNQ
        M N D+ D++DE DS +ATT  DDI Y+E+S+EWS+WRDD A+EMF+EW+LRNQ
Subjt:  MKNADVIDDVDEGDSIYATTRGDDIQYVESSDEWSKWRDDKAKEMFNEWQLRNQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAACGCTGACGTAATAGATGACGTCGACGAAGGTGACTCAATATATGCAACGACTAGAGGTGACGACATTCAATACGTTGAGAGCTCGGACGAATGGAGTAAGTG
GAGGGACGATAAAGCGAAGGAGATGTTCAATGAATGGCAATTGCGGAATCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAACGCTGACGTAATAGATGACGTCGACGAAGGTGACTCAATATATGCAACGACTAGAGGTGACGACATTCAATACGTTGAGAGCTCGGACGAATGGAGTAAGTG
GAGGGACGATAAAGCGAAGGAGATGTTCAATGAATGGCAATTGCGGAATCAGTAG
Protein sequenceShow/hide protein sequence
MKNADVIDDVDEGDSIYATTRGDDIQYVESSDEWSKWRDDKAKEMFNEWQLRNQ