CuGenDBv2

Gene ID	PI0013276
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3A .
Genome location	chr07:4798528..4802739
RNA-Seq Expression	PI0013276
Synteny	PI0013276
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0000166 - nucleotide binding (molecular function) GO:0016874 - ligase activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0044831.1 uncharacterized protein E6C27_scaffold74G001230 [Cucumis melo var. makuwa]

5.4e-50

97.44

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Query:  MEQSPADSSTTSIETECQIPATSPNSTTSSVIEDCTKTQSSLSQTQILNAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
        MEQSPADSSTTSIETECQIPATSPNSTTSS +EDCTKTQSSLSQTQIL AIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
Subjt:  MEQSPADSSTTSIETECQIPATSPNSTTSSVIEDCTKTQSSLSQTQILNAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES

Query:  VLDAATKGNRYINSSLR
        VLDAATKGNRYINSSLR
Subjt:  VLDAATKGNRYINSSLR

KAG7015189.1 hypothetical protein SDJN02_22822 [Cucurbita argyrosperma subsp. argyrosperma]

2.0e-52

83.45

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Query:  MEQSPADSSTTSIETECQIPATSPNST-----TSSVIEDCTKTQSSLSQTQILNAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAG
        MEQSP+DSS +SIE   QIPATSPNS      T SV+EDCT+ +SSLS T+I  AI+VVEKDSLAIAESFTSLFASLRS LSEVTSNSIDHMHCFNDAAG
Subjt:  MEQSPADSSTTSIETECQIPATSPNST-----TSSVIEDCTKTQSSLSQTQILNAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAG

Query:  RLQESVLDAATKGNRYINSSLRLNQEMKGMDNLAAQLYPFYFIPS
        RLQESVLDAATKGNRYINSSLRLNQEMKGMDNLAAQLYPFYF+PS
Subjt:  RLQESVLDAATKGNRYINSSLRLNQEMKGMDNLAAQLYPFYFIPS

TYK16633.1 uncharacterized protein E5676_scaffold21G004610 [Cucumis melo var. makuwa]

5.4e-50

97.44

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Query:  MEQSPADSSTTSIETECQIPATSPNSTTSSVIEDCTKTQSSLSQTQILNAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
        MEQSPADSSTTSIETECQIPATSPNSTTSS +EDCTKTQSSLSQTQIL AIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
Subjt:  MEQSPADSSTTSIETECQIPATSPNSTTSSVIEDCTKTQSSLSQTQILNAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES

Query:  VLDAATKGNRYINSSLR
        VLDAATKGNRYINSSLR
Subjt:  VLDAATKGNRYINSSLR

XP_004146523.1 uncharacterized protein LOC101210623 [Cucumis sativus]

8.3e-59

97.73

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Query:  MEQSPADSSTTSIETECQIPATSPNSTTSSVIEDCTKTQSSLSQTQILNAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
        MEQSPADSSTTSIETECQIPATSPNSTTSSVIEDCTKTQSSLSQ QIL AIEVVEKDSLA+AESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
Subjt:  MEQSPADSSTTSIETECQIPATSPNSTTSSVIEDCTKTQSSLSQTQILNAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES

Query:  VLDAATKGNRYINSSLRLNQEMKGMDNLAAQL
        VLDAATKGNRYINSSLRLNQEMKGMDNLAAQL
Subjt:  VLDAATKGNRYINSSLRLNQEMKGMDNLAAQL

XP_008452025.1 PREDICTED: uncharacterized protein LOC103493156 [Cucumis melo]

8.3e-59

97.73

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Query:  MEQSPADSSTTSIETECQIPATSPNSTTSSVIEDCTKTQSSLSQTQILNAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
        MEQSPADSSTTSIETECQIPATSPNSTTSS +EDCTKTQSSLSQTQIL AIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
Subjt:  MEQSPADSSTTSIETECQIPATSPNSTTSSVIEDCTKTQSSLSQTQILNAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES

Query:  VLDAATKGNRYINSSLRLNQEMKGMDNLAAQL
        VLDAATKGNRYINSSLRLNQEMKGMDNLAAQL
Subjt:  VLDAATKGNRYINSSLRLNQEMKGMDNLAAQL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KWT2 Uncharacterized protein

4.0e-59

97.73

Show/hide

Query:  MEQSPADSSTTSIETECQIPATSPNSTTSSVIEDCTKTQSSLSQTQILNAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
        MEQSPADSSTTSIETECQIPATSPNSTTSSVIEDCTKTQSSLSQ QIL AIEVVEKDSLA+AESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
Subjt:  MEQSPADSSTTSIETECQIPATSPNSTTSSVIEDCTKTQSSLSQTQILNAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES

Query:  VLDAATKGNRYINSSLRLNQEMKGMDNLAAQL
        VLDAATKGNRYINSSLRLNQEMKGMDNLAAQL
Subjt:  VLDAATKGNRYINSSLRLNQEMKGMDNLAAQL

A0A1S3BTP0 uncharacterized protein LOC103493156

4.0e-59

97.73

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Query:  MEQSPADSSTTSIETECQIPATSPNSTTSSVIEDCTKTQSSLSQTQILNAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
        MEQSPADSSTTSIETECQIPATSPNSTTSS +EDCTKTQSSLSQTQIL AIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
Subjt:  MEQSPADSSTTSIETECQIPATSPNSTTSSVIEDCTKTQSSLSQTQILNAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES

Query:  VLDAATKGNRYINSSLRLNQEMKGMDNLAAQL
        VLDAATKGNRYINSSLRLNQEMKGMDNLAAQL
Subjt:  VLDAATKGNRYINSSLRLNQEMKGMDNLAAQL

A0A5A7TTI6 Uncharacterized protein

2.6e-50

97.44

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Query:  MEQSPADSSTTSIETECQIPATSPNSTTSSVIEDCTKTQSSLSQTQILNAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
        MEQSPADSSTTSIETECQIPATSPNSTTSS +EDCTKTQSSLSQTQIL AIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
Subjt:  MEQSPADSSTTSIETECQIPATSPNSTTSSVIEDCTKTQSSLSQTQILNAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES

Query:  VLDAATKGNRYINSSLR
        VLDAATKGNRYINSSLR
Subjt:  VLDAATKGNRYINSSLR

A0A5D3CXL4 Uncharacterized protein

2.6e-50

97.44

Show/hide

Query:  MEQSPADSSTTSIETECQIPATSPNSTTSSVIEDCTKTQSSLSQTQILNAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
        MEQSPADSSTTSIETECQIPATSPNSTTSS +EDCTKTQSSLSQTQIL AIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
Subjt:  MEQSPADSSTTSIETECQIPATSPNSTTSSVIEDCTKTQSSLSQTQILNAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES

Query:  VLDAATKGNRYINSSLR
        VLDAATKGNRYINSSLR
Subjt:  VLDAATKGNRYINSSLR

A0A6J1EUG1 uncharacterized protein LOC111437668

1.2e-47

83.21

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Query:  MEQSPADSSTTSIETECQIPATSPNST-----TSSVIEDCTKTQSSLSQTQILNAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAG
        MEQSP+DSS +SIE   QIPATSPNS      T SV+EDCT+ +SSLS T+I  AI+VVEKDSLAIAESFTSLFASLRS LSEVTSNSIDHMHCFNDAAG
Subjt:  MEQSPADSSTTSIETECQIPATSPNST-----TSSVIEDCTKTQSSLSQTQILNAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAG

Query:  RLQESVLDAATKGNRYINSSLRLNQEMKGMDNLAAQL
        RLQESVLDAATKGNRYINSSLRLNQEMKGMDNLAAQL
Subjt:  RLQESVLDAATKGNRYINSSLRLNQEMKGMDNLAAQL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G23330.1 BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3A (TAIR:AT4G11420.1)

3.2e-24

72.15

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Query:  SSLSQTQILNAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSLRL
        SSL+Q +IL  +  VEKDS AIAESF+SLF SLRS LSE T +S+DHM CF +AAGRLQE+ LDAATKGNRYINS LRL
Subjt:  SSLSQTQILNAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSLRL

AT4G23330.2 unknown protein

2.3e-30

70.97

Show/hide

Query:  SSLSQTQILNAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSLRLNQEMKGMDNLAAQL
        SSL+Q +IL  +  VEKDS AIAESF+SLF SLRS LSE T +S+DHM CF +AAGRLQE+ LDAATKGNRYINS LRLN+E+KG++NLAA+L
Subjt:  SSLSQTQILNAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSLRLNQEMKGMDNLAAQL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGCAATCTCCGGCGGATTCTTCGACGACGAGCATCGAAACTGAATGTCAGATTCCAGCCACATCCCCAAATTCGACCACTTCTTCTGTCATTGAAGATTGCACCAA
AACCCAATCTTCTTTGAGCCAAACCCAGATTCTCAATGCCATTGAAGTCGTTGAGAAGGACTCTCTCGCCATTGCTGAGAGCTTCACCTCTCTCTTTGCTTCCCTGCGCT
CGGTCCTCTCCGAGGTCACCAGCAACTCTATTGATCATATGCATTGCTTCAACGATGCAGCAGGCCGCCTTCAAGAATCTGTGCTTGATGCGGCAACGAAGGGCAATCGA
TACATTAATTCTTCCTTGAGATTGAATCAGGAAATGAAAGGCATGGATAATCTAGCTGCTCAGCTGTATCCTTTCTATTTCATTCCTTCTTTTTTACTTTTTTGGCATGC
TCCCAGATTAGTTACATGCCTAGTAGATCATTCTAATGTTTCTTTATCTGGCTGTCATTTCCTCATGTTTCAATCCTCTGCATTACCCAACTTCCTTAATTCTTGCTTAG
AAAGGTTTTGA

mRNA sequence

Show/hide mRNA sequence

CGAAGCTATATGGATAGAAATCCCTAGATTTAGTACTAAAAAAACCCCCTAAATTTAACTACCAACTCCAACCCATTTATTGAACTTCACAAAAGAAACTAAAATCTAGC
CACCAATGAATTACTAAGAGAAGTGCTTTGGTGGAGCAATGGCCTGATCCTAATGGGAACTCAAAAGAAACCCAATTTTGGAATTGATTTTCAAAACTCATCGAGAAATG
GAGCAATCTCCGGCGGATTCTTCGACGACGAGCATCGAAACTGAATGTCAGATTCCAGCCACATCCCCAAATTCGACCACTTCTTCTGTCATTGAAGATTGCACCAAAAC
CCAATCTTCTTTGAGCCAAACCCAGATTCTCAATGCCATTGAAGTCGTTGAGAAGGACTCTCTCGCCATTGCTGAGAGCTTCACCTCTCTCTTTGCTTCCCTGCGCTCGG
TCCTCTCCGAGGTCACCAGCAACTCTATTGATCATATGCATTGCTTCAACGATGCAGCAGGCCGCCTTCAAGAATCTGTGCTTGATGCGGCAACGAAGGGCAATCGATAC
ATTAATTCTTCCTTGAGATTGAATCAGGAAATGAAAGGCATGGATAATCTAGCTGCTCAGCTGTATCCTTTCTATTTCATTCCTTCTTTTTTACTTTTTTGGCATGCTCC
CAGATTAGTTACATGCCTAGTAGATCATTCTAATGTTTCTTTATCTGGCTGTCATTTCCTCATGTTTCAATCCTCTGCATTACCCAACTTCCTTAATTCTTGCTTAGAAA
GGTTTTGAGGAAGAATGTGGATGAACTCGACTTGGCTGTGAACAAGCTCCTTAATTTTCCATGAGCTCCACTTAGACATATCGTCGCTCTTGCAAGCTCAAGGATTTTTG
TTTTCACCAAAGAGAAAATACAGTTCATGACGAAAAAATATTCATTCCATAGCTTCCTTCACATTTTACTCTGGGAAGCATCTCATTGCATGTTAGGTTCTTTGATGTAT
TTATCCAGAAATAGATTTTCTTGATCGCTTAATAATATATACTGGTTTGTGGTTTCAATA

Protein sequence

Show/hide protein sequence

MEQSPADSSTTSIETECQIPATSPNSTTSSVIEDCTKTQSSLSQTQILNAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNR
YINSSLRLNQEMKGMDNLAAQLYPFYFIPSFLLFWHAPRLVTCLVDHSNVSLSGCHFLMFQSSALPNFLNSCLERF

PI0013276 (gene) of Melon (PI 482460) v1 genome