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PI0013286 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013286
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr03:14046399..14046836
RNA-Seq ExpressionPI0013286
SyntenyPI0013286
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN47724.1 hypothetical protein Csa_018306 [Cucumis sativus]9.8e-3159.54Show/hide
Query:  MAIVFGNTVRRFEPVETDEEGMCWGRTMRVRVSIDVKKHLIRVVKLKVGSMGEEVFIPISYEKLMDFCYECGKLGHVFEDCSSSSDTAEEQDCNSHFGTG
        MAIVF N VRRF   ETDE+GMCWGR  RVR                                LMDFCYECGKLGHV EDCSSSSDTAEEQDCNS FGTG
Subjt:  MAIVFGNTVRRFEPVETDEEGMCWGRTMRVRVSIDVKKHLIRVVKLKVGSMGEEVFIPISYEKLMDFCYECGKLGHVFEDCSSSSDTAEEQDCNSHFGTG

Query:  EEDLRYEDWPRGVRKGGDGKYKGLEYETEEG
         EDL YEDWP GVRKGGD KY+ L  E   G
Subjt:  EEDLRYEDWPRGVRKGGDGKYKGLEYETEEG

PON92154.1 Zinc knuckle CX2CX4HX4C [Trema orientale]4.6e-1235.71Show/hide
Query:  MAIVFGNTVRRFEPVETDEEGMCWGRTMRVRVSIDVKKHLIRVVKLKVGSMGEEVFIPISYEKLMDFCYECGKLGHVFEDCSSSSDTAEEQDCNSHFGTG
        +A + GN   RF  VE D+ G C GR + VRV +D+ K L R  K+++GS G  +++   Y +L DFC+ CGK+GH   DC         ++       G
Subjt:  MAIVFGNTVRRFEPVETDEEGMCWGRTMRVRVSIDVKKHLIRVVKLKVGSMGEEVFIPISYEKLMDFCYECGKLGHVFEDCSSSSDTAEEQDCNSHFGTG

Query:  EEDLRYEDWPRG
        +++  Y  W RG
Subjt:  EEDLRYEDWPRG

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]1.0e-1146.34Show/hide
Query:  MAIVFGNTVRRFEPVETDEEGMCWGRTMRVRVSIDVKKHLIRVVKLKVGSMGEEVFIPISYEKLMDFCYECGKLGHVFEDCS
        MA   GN +  FE VE++    CWG  +RVRV  DV K L R +KL +       +IPI YE+L DF Y CG+L H+ +DCS
Subjt:  MAIVFGNTVRRFEPVETDEEGMCWGRTMRVRVSIDVKKHLIRVVKLKVGSMGEEVFIPISYEKLMDFCYECGKLGHVFEDCS

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]9.2e-1338.02Show/hide
Query:  MAIVFGNTVRRFEPVETDEEGMCWGRTMRVRVSIDVKKHLIRVVKLKVGSMGEEVFIPISYEKLMDFCYECGKLGHVFEDCSSSSDTAEEQD-CNSHFGT
        MAI  GN +  F  V+ +E+G  WG ++R+RV ID+ K L R +K+ +       +IPI YE+L DFCY CG +GH   DC +    A++     S +G 
Subjt:  MAIVFGNTVRRFEPVETDEEGMCWGRTMRVRVSIDVKKHLIRVVKLKVGSMGEEVFIPISYEKLMDFCYECGKLGHVFEDCSSSSDTAEEQD-CNSHFGT

Query:  GEEDLRYEDWPRGVRKGGDGK
            LR+     G +KG  GK
Subjt:  GEEDLRYEDWPRGVRKGGDGK

XP_028124075.1 uncharacterized protein LOC114321128 [Camellia sinensis]5.0e-1137.04Show/hide
Query:  VFGNTVRRFEPVETDEEGMCWGRTMRVRVSIDVKKHLIRVVKLKVGSMGEEVFIPISYEKLMDFCYECGKLGHVFEDCSSSSDTAEEQDCNSHFGTGEED
        + GN V +F  ++ ++ G+ WGRTMR+RV+IDV+K L R +KL + S  + +++   YE+L  +CY CG+LGH   +C      A+        GT  + 
Subjt:  VFGNTVRRFEPVETDEEGMCWGRTMRVRVSIDVKKHLIRVVKLKVGSMGEEVFIPISYEKLMDFCYECGKLGHVFEDCSSSSDTAEEQDCNSHFGTGEED

Query:  LRYEDWPR
        L+Y  W R
Subjt:  LRYEDWPR

TrEMBL top hitse value%identityAlignment
A0A0A0KFU3 CCHC-type domain-containing protein4.7e-3159.54Show/hide
Query:  MAIVFGNTVRRFEPVETDEEGMCWGRTMRVRVSIDVKKHLIRVVKLKVGSMGEEVFIPISYEKLMDFCYECGKLGHVFEDCSSSSDTAEEQDCNSHFGTG
        MAIVF N VRRF   ETDE+GMCWGR  RVR                                LMDFCYECGKLGHV EDCSSSSDTAEEQDCNS FGTG
Subjt:  MAIVFGNTVRRFEPVETDEEGMCWGRTMRVRVSIDVKKHLIRVVKLKVGSMGEEVFIPISYEKLMDFCYECGKLGHVFEDCSSSSDTAEEQDCNSHFGTG

Query:  EEDLRYEDWPRGVRKGGDGKYKGLEYETEEG
         EDL YEDWP GVRKGGD KY+ L  E   G
Subjt:  EEDLRYEDWPRGVRKGGDGKYKGLEYETEEG

A0A0A0LNB5 CCHC-type domain-containing protein3.2e-1143.04Show/hide
Query:  IVFGNTVRRFEPVETDEEGMCWGRTMRVRVSIDVKKHLIRVVKLKVGSMGEEVFIPISYEKLMDFCYECGKLGHVFEDC
        +   N++  FE VE  E    +G  ++VR  IDV++ L     +K+G+M +E  IP++YEKL DFCY CG LGHV ++C
Subjt:  IVFGNTVRRFEPVETDEEGMCWGRTMRVRVSIDVKKHLIRVVKLKVGSMGEEVFIPISYEKLMDFCYECGKLGHVFEDC

A0A2P5F2Z2 Zinc knuckle CX2CX4HX4C2.2e-1235.71Show/hide
Query:  MAIVFGNTVRRFEPVETDEEGMCWGRTMRVRVSIDVKKHLIRVVKLKVGSMGEEVFIPISYEKLMDFCYECGKLGHVFEDCSSSSDTAEEQDCNSHFGTG
        +A + GN   RF  VE D+ G C GR + VRV +D+ K L R  K+++GS G  +++   Y +L DFC+ CGK+GH   DC         ++       G
Subjt:  MAIVFGNTVRRFEPVETDEEGMCWGRTMRVRVSIDVKKHLIRVVKLKVGSMGEEVFIPISYEKLMDFCYECGKLGHVFEDCSSSSDTAEEQDCNSHFGTG

Query:  EEDLRYEDWPRG
        +++  Y  W RG
Subjt:  EEDLRYEDWPRG

A0A6J1BSZ1 uncharacterized protein LOC1110054814.9e-1246.34Show/hide
Query:  MAIVFGNTVRRFEPVETDEEGMCWGRTMRVRVSIDVKKHLIRVVKLKVGSMGEEVFIPISYEKLMDFCYECGKLGHVFEDCS
        MA   GN +  FE VE++    CWG  +RVRV  DV K L R +KL +       +IPI YE+L DF Y CG+L H+ +DCS
Subjt:  MAIVFGNTVRRFEPVETDEEGMCWGRTMRVRVSIDVKKHLIRVVKLKVGSMGEEVFIPISYEKLMDFCYECGKLGHVFEDCS

A0A6J1DU55 uncharacterized protein LOC1110231354.4e-1338.02Show/hide
Query:  MAIVFGNTVRRFEPVETDEEGMCWGRTMRVRVSIDVKKHLIRVVKLKVGSMGEEVFIPISYEKLMDFCYECGKLGHVFEDCSSSSDTAEEQD-CNSHFGT
        MAI  GN +  F  V+ +E+G  WG ++R+RV ID+ K L R +K+ +       +IPI YE+L DFCY CG +GH   DC +    A++     S +G 
Subjt:  MAIVFGNTVRRFEPVETDEEGMCWGRTMRVRVSIDVKKHLIRVVKLKVGSMGEEVFIPISYEKLMDFCYECGKLGHVFEDCSSSSDTAEEQD-CNSHFGT

Query:  GEEDLRYEDWPRGVRKGGDGK
            LR+     G +KG  GK
Subjt:  GEEDLRYEDWPRGVRKGGDGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATTGTGTTTGGCAATACGGTCAGGAGGTTCGAGCCGGTGGAGACGGATGAGGAAGGAATGTGTTGGGGAAGAACTATGAGAGTTAGAGTGAGTATTGATGTGAA
AAAGCATTTGATAAGAGTGGTGAAGTTGAAAGTTGGATCTATGGGGGAAGAAGTTTTTATACCTATCTCTTATGAAAAGCTCATGGATTTCTGCTATGAATGTGGGAAGC
TGGGGCACGTCTTCGAAGACTGCAGTTCTTCTTCTGATACCGCAGAGGAACAAGATTGCAATTCTCATTTTGGTACTGGGGAGGAAGACTTGCGCTATGAAGACTGGCCT
AGAGGGGTGAGAAAGGGAGGGGATGGGAAGTATAAAGGGTTAGAGTACGAAACAGAGGAGGGCTGGGAAGGCTACCATAATGACGACAGTGATAATCTGGAAGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCATTGTGTTTGGCAATACGGTCAGGAGGTTCGAGCCGGTGGAGACGGATGAGGAAGGAATGTGTTGGGGAAGAACTATGAGAGTTAGAGTGAGTATTGATGTGAA
AAAGCATTTGATAAGAGTGGTGAAGTTGAAAGTTGGATCTATGGGGGAAGAAGTTTTTATACCTATCTCTTATGAAAAGCTCATGGATTTCTGCTATGAATGTGGGAAGC
TGGGGCACGTCTTCGAAGACTGCAGTTCTTCTTCTGATACCGCAGAGGAACAAGATTGCAATTCTCATTTTGGTACTGGGGAGGAAGACTTGCGCTATGAAGACTGGCCT
AGAGGGGTGAGAAAGGGAGGGGATGGGAAGTATAAAGGGTTAGAGTACGAAACAGAGGAGGGCTGGGAAGGCTACCATAATGACGACAGTGATAATCTGGAAGTTTAG
Protein sequenceShow/hide protein sequence
MAIVFGNTVRRFEPVETDEEGMCWGRTMRVRVSIDVKKHLIRVVKLKVGSMGEEVFIPISYEKLMDFCYECGKLGHVFEDCSSSSDTAEEQDCNSHFGTGEEDLRYEDWP
RGVRKGGDGKYKGLEYETEEGWEGYHNDDSDNLEV