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PI0013295 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013295
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr09:9270613..9271909
RNA-Seq ExpressionPI0013295
SyntenyPI0013295
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046851.1 uncharacterized protein E6C27_scaffold19358G00020 [Cucumis melo var. makuwa]2.5e-3547.34Show/hide
Query:  SGWSIPGVVIGDFNAMRVHFEACGGSPISCDMEEFNLAIREADLVESSIQGNWFTWTSKV----------------------------------------
        S WS  GVV+GDFNA+RVH EA GGSPI  +MEEF+LAIR+ADLVE S+QGNWFTWTSKV                                        
Subjt:  SGWSIPGVVIGDFNAMRVHFEACGGSPISCDMEEFNLAIREADLVESSIQGNWFTWTSKV----------------------------------------

Query:  ------------------------------------RRIGVSLLVSLMRNLHDLKPVLRRHFGSHITNLSEEVRFAKEAMDRAQREVERDPESVELSRLA
                                            R  GVSLLVSLMRNLH LKP+LRR FG HI +LSEEV  AKEAMD AQREVER+P S  LSR A
Subjt:  ------------------------------------RRIGVSLLVSLMRNLHDLKPVLRRHFGSHITNLSEEVRFAKEAMDRAQREVERDPESVELSRLA

Query:  GLATKAF
         LAT+ F
Subjt:  GLATKAF

KAA0048521.1 uncharacterized protein E6C27_scaffold61G001420 [Cucumis melo var. makuwa]3.1e-4161.15Show/hide
Query:  GWSIPGVVIGDFNAMRVHFEACGGSPISCDMEEFNLAIREADLVESSIQGNWFTWTSKVRRI---------------------------GVSLLVSLMRN
        GWS PG+V+GDFNA+RVH EA GGSPI  +ME+F+LAIR+ADLVE S+QGNWFTWTSK RR+                           GVS LVSL+RN
Subjt:  GWSIPGVVIGDFNAMRVHFEACGGSPISCDMEEFNLAIREADLVESSIQGNWFTWTSKVRRI---------------------------GVSLLVSLMRN

Query:  LHDLKPVLRRHFGSHITNLSEEVRFAKEAMDRAQREVERDPESVELSRLAGLATKAF
        L  LK  +RRHFG HI +LSEEVR AKEAMDRAQREV+R+P S  LSR AGLAT+AF
Subjt:  LHDLKPVLRRHFGSHITNLSEEVRFAKEAMDRAQREVERDPESVELSRLAGLATKAF

KAA0062888.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]6.0e-3753.11Show/hide
Query:  SGWSIPGVVIGDFNAMRVHFEACGGSPISCDMEEFNLAIREADLVESSIQGNWFTWTSKV----------------------------------------
        S WS P VV+GDFNA+RVHFEA GGSPI  +ME+F+LA R+ADLVE S+QGNWFTWTSKV                                        
Subjt:  SGWSIPGVVIGDFNAMRVHFEACGGSPISCDMEEFNLAIREADLVESSIQGNWFTWTSKV----------------------------------------

Query:  ------RRIGVSLLVSLMRNLHDLKPVLRRHFGSHITNLSEEVRFAKEAMDRAQREVERDPESVELSRLAGLATKAF
              R  GVS LVSLMRNL +LKP LRR FG HI +L+EEV  AKE MDRAQREVE +P S  LSR  GLAT+AF
Subjt:  ------RRIGVSLLVSLMRNLHDLKPVLRRHFGSHITNLSEEVRFAKEAMDRAQREVERDPESVELSRLAGLATKAF

TYK28312.1 uncharacterized protein E5676_scaffold600G001370 [Cucumis melo var. makuwa]3.1e-4161.15Show/hide
Query:  GWSIPGVVIGDFNAMRVHFEACGGSPISCDMEEFNLAIREADLVESSIQGNWFTWTSKVRRI---------------------------GVSLLVSLMRN
        GWS PG+V+GDFNA+RVH EA GGSPI  +ME+F+LAIR+ADLVE S+QGNWFTWTSK RR+                           GVS LVSL+RN
Subjt:  GWSIPGVVIGDFNAMRVHFEACGGSPISCDMEEFNLAIREADLVESSIQGNWFTWTSKVRRI---------------------------GVSLLVSLMRN

Query:  LHDLKPVLRRHFGSHITNLSEEVRFAKEAMDRAQREVERDPESVELSRLAGLATKAF
        L  LK  +RRHFG HI +LSEEVR AKEAMDRAQREV+R+P S  LSR AGLAT+AF
Subjt:  LHDLKPVLRRHFGSHITNLSEEVRFAKEAMDRAQREVERDPESVELSRLAGLATKAF

XP_008466769.1 PREDICTED: uncharacterized protein LOC103504100 [Cucumis melo]9.5e-3546.38Show/hide
Query:  SGWSIPGVVIGDFNAMRVHFEACGGSPISCDMEEFNLAIREADLVESSIQGNWFTWTSKV----------------------------------------
        S WS PGVV+GDFNA+RVH EA GGSPI  +ME+F+LAIR+ADLVE S+QGNWFTWTSKV                                        
Subjt:  SGWSIPGVVIGDFNAMRVHFEACGGSPISCDMEEFNLAIREADLVESSIQGNWFTWTSKV----------------------------------------

Query:  ------------------------------------RRIGVSLLVSLMRNLHDLKPVLRRHFGSHITNLSEEVRFAKEAMDRAQREVERDPESVELSRLA
                                            R  GVS LVSLMRNLH LKP LRR FG HI +LSEEV  AKEAMDRAQR+VER+  S  LSR A
Subjt:  ------------------------------------RRIGVSLLVSLMRNLHDLKPVLRRHFGSHITNLSEEVRFAKEAMDRAQREVERDPESVELSRLA

Query:  GLATKAF
         LAT+ F
Subjt:  GLATKAF

TrEMBL top hitse value%identityAlignment
A0A5A7TZS0 Reverse transcriptase domain-containing protein1.2e-3547.34Show/hide
Query:  SGWSIPGVVIGDFNAMRVHFEACGGSPISCDMEEFNLAIREADLVESSIQGNWFTWTSKV----------------------------------------
        S WS  GVV+GDFNA+RVH EA GGSPI  +MEEF+LAIR+ADLVE S+QGNWFTWTSKV                                        
Subjt:  SGWSIPGVVIGDFNAMRVHFEACGGSPISCDMEEFNLAIREADLVESSIQGNWFTWTSKV----------------------------------------

Query:  ------------------------------------RRIGVSLLVSLMRNLHDLKPVLRRHFGSHITNLSEEVRFAKEAMDRAQREVERDPESVELSRLA
                                            R  GVSLLVSLMRNLH LKP+LRR FG HI +LSEEV  AKEAMD AQREVER+P S  LSR A
Subjt:  ------------------------------------RRIGVSLLVSLMRNLHDLKPVLRRHFGSHITNLSEEVRFAKEAMDRAQREVERDPESVELSRLA

Query:  GLATKAF
         LAT+ F
Subjt:  GLATKAF

A0A5A7U4M4 Reverse transcriptase domain-containing protein1.5e-4161.15Show/hide
Query:  GWSIPGVVIGDFNAMRVHFEACGGSPISCDMEEFNLAIREADLVESSIQGNWFTWTSKVRRI---------------------------GVSLLVSLMRN
        GWS PG+V+GDFNA+RVH EA GGSPI  +ME+F+LAIR+ADLVE S+QGNWFTWTSK RR+                           GVS LVSL+RN
Subjt:  GWSIPGVVIGDFNAMRVHFEACGGSPISCDMEEFNLAIREADLVESSIQGNWFTWTSKVRRI---------------------------GVSLLVSLMRN

Query:  LHDLKPVLRRHFGSHITNLSEEVRFAKEAMDRAQREVERDPESVELSRLAGLATKAF
        L  LK  +RRHFG HI +LSEEVR AKEAMDRAQREV+R+P S  LSR AGLAT+AF
Subjt:  LHDLKPVLRRHFGSHITNLSEEVRFAKEAMDRAQREVERDPESVELSRLAGLATKAF

A0A5A7V275 Reverse transcriptase4.6e-3546.38Show/hide
Query:  SGWSIPGVVIGDFNAMRVHFEACGGSPISCDMEEFNLAIREADLVESSIQGNWFTWTSKV----------------------------------------
        S WS PGVV+GDFNA+RVH EA GGSPI  +ME+F+LAIR+ADLVE S+QGNWFTWTSKV                                        
Subjt:  SGWSIPGVVIGDFNAMRVHFEACGGSPISCDMEEFNLAIREADLVESSIQGNWFTWTSKV----------------------------------------

Query:  ------------------------------------RRIGVSLLVSLMRNLHDLKPVLRRHFGSHITNLSEEVRFAKEAMDRAQREVERDPESVELSRLA
                                            R  GVS LVSLMRNLH LKP LRR FG HI +LSEEV  AKEAMDRAQR+VER+  S  LSR A
Subjt:  ------------------------------------RRIGVSLLVSLMRNLHDLKPVLRRHFGSHITNLSEEVRFAKEAMDRAQREVERDPESVELSRLA

Query:  GLATKAF
         LAT+ F
Subjt:  GLATKAF

A0A5A7V5J2 Non-LTR retroelement reverse transcriptase-like protein2.9e-3753.11Show/hide
Query:  SGWSIPGVVIGDFNAMRVHFEACGGSPISCDMEEFNLAIREADLVESSIQGNWFTWTSKV----------------------------------------
        S WS P VV+GDFNA+RVHFEA GGSPI  +ME+F+LA R+ADLVE S+QGNWFTWTSKV                                        
Subjt:  SGWSIPGVVIGDFNAMRVHFEACGGSPISCDMEEFNLAIREADLVESSIQGNWFTWTSKV----------------------------------------

Query:  ------RRIGVSLLVSLMRNLHDLKPVLRRHFGSHITNLSEEVRFAKEAMDRAQREVERDPESVELSRLAGLATKAF
              R  GVS LVSLMRNL +LKP LRR FG HI +L+EEV  AKE MDRAQREVE +P S  LSR  GLAT+AF
Subjt:  ------RRIGVSLLVSLMRNLHDLKPVLRRHFGSHITNLSEEVRFAKEAMDRAQREVERDPESVELSRLAGLATKAF

A0A5D3DXQ8 Reverse transcriptase domain-containing protein1.5e-4161.15Show/hide
Query:  GWSIPGVVIGDFNAMRVHFEACGGSPISCDMEEFNLAIREADLVESSIQGNWFTWTSKVRRI---------------------------GVSLLVSLMRN
        GWS PG+V+GDFNA+RVH EA GGSPI  +ME+F+LAIR+ADLVE S+QGNWFTWTSK RR+                           GVS LVSL+RN
Subjt:  GWSIPGVVIGDFNAMRVHFEACGGSPISCDMEEFNLAIREADLVESSIQGNWFTWTSKVRRI---------------------------GVSLLVSLMRN

Query:  LHDLKPVLRRHFGSHITNLSEEVRFAKEAMDRAQREVERDPESVELSRLAGLATKAF
        L  LK  +RRHFG HI +LSEEVR AKEAMDRAQREV+R+P S  LSR AGLAT+AF
Subjt:  LHDLKPVLRRHFGSHITNLSEEVRFAKEAMDRAQREVERDPESVELSRLAGLATKAF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCGACCCTGGCCTTGCCAGGAAACCTCTTGCTCCGCTTATACTTGAGCGAACAAGAGAAAAACTTGATATAAAACCCAATAGAGATTACTCTGGTTGGTCGATTCC
GGGTGTTGTCATAGGTGACTTTAATGCTATGCGAGTGCACTTTGAAGCTTGCGGTGGGAGTCCGATTTCTTGTGATATGGAGGAGTTTAATCTTGCTATTCGTGAGGCTG
ACTTGGTTGAGTCGTCTATTCAGGGTAACTGGTTCACGTGGACGAGTAAGGTGAGAAGGATTGGTGTTTCTCTGTTAGTGAGTCTTATGCGAAATTTACATGACCTTAAG
CCTGTCCTTCGTAGACATTTTGGTAGCCATATTACGAACCTTAGTGAGGAGGTACGCTTTGCTAAAGAGGCTATGGATAGGGCCCAGCGTGAGGTTGAGCGGGATCCTGA
GTCTGTTGAGTTGAGTCGGCTTGCTGGGCTTGCTACTAAGGCTTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCGACCCTGGCCTTGCCAGGAAACCTCTTGCTCCGCTTATACTTGAGCGAACAAGAGAAAAACTTGATATAAAACCCAATAGAGATTACTCTGGTTGGTCGATTCC
GGGTGTTGTCATAGGTGACTTTAATGCTATGCGAGTGCACTTTGAAGCTTGCGGTGGGAGTCCGATTTCTTGTGATATGGAGGAGTTTAATCTTGCTATTCGTGAGGCTG
ACTTGGTTGAGTCGTCTATTCAGGGTAACTGGTTCACGTGGACGAGTAAGGTGAGAAGGATTGGTGTTTCTCTGTTAGTGAGTCTTATGCGAAATTTACATGACCTTAAG
CCTGTCCTTCGTAGACATTTTGGTAGCCATATTACGAACCTTAGTGAGGAGGTACGCTTTGCTAAAGAGGCTATGGATAGGGCCCAGCGTGAGGTTGAGCGGGATCCTGA
GTCTGTTGAGTTGAGTCGGCTTGCTGGGCTTGCTACTAAGGCTTTCTAGTCGTCTATTTGTTGGGAAGAAGCCTCTCCTCGTCATAAATCACGGATTAGGTGGTTGGAGC
TTGGTGATCAGAATTTTGCCTTTTTTCATCGTTCAGTTCGTTCCCATATTTGTCATAATAACCTGCTTTCTGTTGTGGATTCTGAGGGTATACGAGTGATGTCCCATCAT
GGGTTGATACAGGTGGCGGTTAAATTTTTTCGTAATAGTTTGGGTTCCCAGGTGATTGGCTATAGGGAGCTCTCTCCGCTGCTGGAGGAGG
Protein sequenceShow/hide protein sequence
MFDPGLARKPLAPLILERTREKLDIKPNRDYSGWSIPGVVIGDFNAMRVHFEACGGSPISCDMEEFNLAIREADLVESSIQGNWFTWTSKVRRIGVSLLVSLMRNLHDLK
PVLRRHFGSHITNLSEEVRFAKEAMDRAQREVERDPESVELSRLAGLATKAF