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PI0013320 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013320
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol
Genome locationchr07:14551675..14552637
RNA-Seq ExpressionPI0013320
SyntenyPI0013320
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038296.1 hypothetical protein E6C27_scaffold270G001610 [Cucumis melo var. makuwa]1.1e-1342.86Show/hide
Query:  DDFMQELCDTDFDAED-FREAKDATLVPDESQQTEVLEEPVDDPLPKGKEIAFEEAGKTRAPSPPKQTKDQQNIAAEENEDEDFYKFINDAIGKPMMDGL
        D     +CD     ED  +  +D +LVP  S + EVLE+ VDDPL KGK I  + A +T  PSPPK+T  Q + A E ++ ++++KFI +  GKPM DG 
Subjt:  DDFMQELCDTDFDAED-FREAKDATLVPDESQQTEVLEEPVDDPLPKGKEIAFEEAGKTRAPSPPKQTKDQQNIAAEENEDEDFYKFINDAIGKPMMDGL

Query:  EDIFQNQPDLHERTIRHEK
        ED+FQ Q +  E  +R +K
Subjt:  EDIFQNQPDLHERTIRHEK

KAA0043584.1 hypothetical protein E6C27_scaffold320G00130 [Cucumis melo var. makuwa]1.4e-1337.24Show/hide
Query:  QLNEGIDDFMQE-LCD-TDFDAEDFREAKDATLVPDESQQTEVLEEPVDDPLPKGKEIAFEEAGKTRAPSPPKQ--------TKDQQNIAAEENEDEDFY
        Q +E + D +Q+ LCD   F  +  +E+++ TL         +LE+ +DDPL K K++  E+A KTR PSPPKQ        TK ++ I  ++++DE ++
Subjt:  QLNEGIDDFMQE-LCD-TDFDAEDFREAKDATLVPDESQQTEVLEEPVDDPLPKGKEIAFEEAGKTRAPSPPKQ--------TKDQQNIAAEENEDEDFY

Query:  KFINDAIGKPMMDGLEDIFQNQPDLHERTIRHEKHISDLELNIDN
        KFIN+ + +P+  G ED+FQ Q +L E  ++++K + DLEL  D+
Subjt:  KFINDAIGKPMMDGLEDIFQNQPDLHERTIRHEKHISDLELNIDN

TYK19850.1 hypothetical protein E5676_scaffold811G00610 [Cucumis melo var. makuwa]2.8e-1446.02Show/hide
Query:  LCDTDFDAED-FREAKDATLVPDESQQTEVLEEPVDDPLPKGKEIAFEEAGKTRAPSPPKQTKDQQNIAAEENEDEDFYKFINDAIGKPMMDGLEDIFQN
        +CD     ED  +  +D +LVP  S + EVLE+ VDDPL KGK I  + A +T  PSPPK+T  Q + A E +E ++++KFI +  GKPM DG ED+FQ 
Subjt:  LCDTDFDAED-FREAKDATLVPDESQQTEVLEEPVDDPLPKGKEIAFEEAGKTRAPSPPKQTKDQQNIAAEENEDEDFYKFINDAIGKPMMDGLEDIFQN

Query:  QPDLHERTIRHEK
        Q +  E  +R EK
Subjt:  QPDLHERTIRHEK

TYK23898.1 gag-pol [Cucumis melo var. makuwa]6.3e-1459.49Show/hide
Query:  EVLEEPVDDPLPKGKEIAFEEAGKTRAPSPPKQTKDQQNIAAEENEDED-FYKFINDAIGKPMMDGLEDIFQNQPDLHE
        +V EEPVDD L KGK+IA+E+ G+   PSP KQT +QQ+    E++DED ++KFI+D  GKPMMD LEDIFQ Q DL E
Subjt:  EVLEEPVDDPLPKGKEIAFEEAGKTRAPSPPKQTKDQQNIAAEENEDED-FYKFINDAIGKPMMDGLEDIFQNQPDLHE

TYK29776.1 hypothetical protein E5676_scaffold2208G00350 [Cucumis melo var. makuwa]1.4e-1337.24Show/hide
Query:  QLNEGIDDFMQE-LCD-TDFDAEDFREAKDATLVPDESQQTEVLEEPVDDPLPKGKEIAFEEAGKTRAPSPPKQ--------TKDQQNIAAEENEDEDFY
        Q +E + D +Q+ LCD   F  +  +E+++ TL         +LE+ +DDPL K K++  E+A KTR PSPPKQ        TK ++ I  ++++DE ++
Subjt:  QLNEGIDDFMQE-LCD-TDFDAEDFREAKDATLVPDESQQTEVLEEPVDDPLPKGKEIAFEEAGKTRAPSPPKQ--------TKDQQNIAAEENEDEDFY

Query:  KFINDAIGKPMMDGLEDIFQNQPDLHERTIRHEKHISDLELNIDN
        KFIN+ + +P+  G ED+FQ Q +L E  ++++K + DLEL  D+
Subjt:  KFINDAIGKPMMDGLEDIFQNQPDLHERTIRHEKHISDLELNIDN

TrEMBL top hitse value%identityAlignment
A0A5A7T7V1 Uncharacterized protein5.2e-1442.86Show/hide
Query:  DDFMQELCDTDFDAED-FREAKDATLVPDESQQTEVLEEPVDDPLPKGKEIAFEEAGKTRAPSPPKQTKDQQNIAAEENEDEDFYKFINDAIGKPMMDGL
        D     +CD     ED  +  +D +LVP  S + EVLE+ VDDPL KGK I  + A +T  PSPPK+T  Q + A E ++ ++++KFI +  GKPM DG 
Subjt:  DDFMQELCDTDFDAED-FREAKDATLVPDESQQTEVLEEPVDDPLPKGKEIAFEEAGKTRAPSPPKQTKDQQNIAAEENEDEDFYKFINDAIGKPMMDGL

Query:  EDIFQNQPDLHERTIRHEK
        ED+FQ Q +  E  +R +K
Subjt:  EDIFQNQPDLHERTIRHEK

A0A5A7TJU0 Uncharacterized protein6.8e-1437.24Show/hide
Query:  QLNEGIDDFMQE-LCD-TDFDAEDFREAKDATLVPDESQQTEVLEEPVDDPLPKGKEIAFEEAGKTRAPSPPKQ--------TKDQQNIAAEENEDEDFY
        Q +E + D +Q+ LCD   F  +  +E+++ TL         +LE+ +DDPL K K++  E+A KTR PSPPKQ        TK ++ I  ++++DE ++
Subjt:  QLNEGIDDFMQE-LCD-TDFDAEDFREAKDATLVPDESQQTEVLEEPVDDPLPKGKEIAFEEAGKTRAPSPPKQ--------TKDQQNIAAEENEDEDFY

Query:  KFINDAIGKPMMDGLEDIFQNQPDLHERTIRHEKHISDLELNIDN
        KFIN+ + +P+  G ED+FQ Q +L E  ++++K + DLEL  D+
Subjt:  KFINDAIGKPMMDGLEDIFQNQPDLHERTIRHEKHISDLELNIDN

A0A5D3D8Q5 Uncharacterized protein1.4e-1446.02Show/hide
Query:  LCDTDFDAED-FREAKDATLVPDESQQTEVLEEPVDDPLPKGKEIAFEEAGKTRAPSPPKQTKDQQNIAAEENEDEDFYKFINDAIGKPMMDGLEDIFQN
        +CD     ED  +  +D +LVP  S + EVLE+ VDDPL KGK I  + A +T  PSPPK+T  Q + A E +E ++++KFI +  GKPM DG ED+FQ 
Subjt:  LCDTDFDAED-FREAKDATLVPDESQQTEVLEEPVDDPLPKGKEIAFEEAGKTRAPSPPKQTKDQQNIAAEENEDEDFYKFINDAIGKPMMDGLEDIFQN

Query:  QPDLHERTIRHEK
        Q +  E  +R EK
Subjt:  QPDLHERTIRHEK

A0A5D3DK59 Gag-pol3.0e-1459.49Show/hide
Query:  EVLEEPVDDPLPKGKEIAFEEAGKTRAPSPPKQTKDQQNIAAEENEDED-FYKFINDAIGKPMMDGLEDIFQNQPDLHE
        +V EEPVDD L KGK+IA+E+ G+   PSP KQT +QQ+    E++DED ++KFI+D  GKPMMD LEDIFQ Q DL E
Subjt:  EVLEEPVDDPLPKGKEIAFEEAGKTRAPSPPKQTKDQQNIAAEENEDED-FYKFINDAIGKPMMDGLEDIFQNQPDLHE

A0A5D3E1H0 Uncharacterized protein6.8e-1437.24Show/hide
Query:  QLNEGIDDFMQE-LCD-TDFDAEDFREAKDATLVPDESQQTEVLEEPVDDPLPKGKEIAFEEAGKTRAPSPPKQ--------TKDQQNIAAEENEDEDFY
        Q +E + D +Q+ LCD   F  +  +E+++ TL         +LE+ +DDPL K K++  E+A KTR PSPPKQ        TK ++ I  ++++DE ++
Subjt:  QLNEGIDDFMQE-LCD-TDFDAEDFREAKDATLVPDESQQTEVLEEPVDDPLPKGKEIAFEEAGKTRAPSPPKQ--------TKDQQNIAAEENEDEDFY

Query:  KFINDAIGKPMMDGLEDIFQNQPDLHERTIRHEKHISDLELNIDN
        KFIN+ + +P+  G ED+FQ Q +L E  ++++K + DLEL  D+
Subjt:  KFINDAIGKPMMDGLEDIFQNQPDLHERTIRHEKHISDLELNIDN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGACGCCTAAAAACCTTAAAGGGTGGAAAAGGCGAGAAAGAAGATGATGAAGTGGAGATTGATGATGAAGAAAGGGAAAGTCCAATAACAGTCCCACTCATTCGCAA
GAGGAAAGGCGAGGAAGAGGCATCTGGGTCCAAGAAGAAGAAGAAGTATATGGCTAAGGACTCCAGTGACCCTATTCCTCTCGCGATTGAAAGCCCACCAAAACAAAAAA
AGCCTAAGTTCACCATCCTGCCTTCACCTCCCAAGGCAATAAAAGAACCACCACTTTTCCCCATAATCCAAATTCCTTCTCCCCACAAATCCAAAACGTCAAGCCCTATC
CACCAAGTCCAAATAATTACCACTCCCACTTCCCCACGGCAAAAGGAAAATCCTCAATCTCTTGTCGCTCAAGCCCTTGATCAAACTAACTTTTCGCCCAACATTGTTTT
TGATGCCCAACTTAATGAAGGGATTGATGACTTCATGCAAGAACTCTGCGATACAGACTTTGATGCTGAAGATTTCAGAGAAGCAAAGGACGCGACTCTAGTTCCTGATG
AGTCGCAACAAACAGAAGTTCTTGAGGAGCCAGTTGATGACCCACTCCCCAAAGGTAAAGAAATAGCCTTTGAGGAAGCTGGCAAAACGCGAGCTCCTTCACCGCCGAAG
CAAACAAAAGACCAACAAAACATTGCGGCGGAAGAAAATGAAGATGAAGACTTTTACAAGTTCATCAATGATGCGATTGGAAAGCCAATGATGGATGGACTTGAAGATAT
CTTCCAAAACCAACCTGATCTGCATGAACGCACGATAAGACATGAAAAACATATTTCAGACTTGGAGTTAAACATTGACAACCATCATCAATCCCAACATGACCAGCTCA
CCTCTGAGATTGTGAGCCTGAAGGAGCAAAATAAGGCGATGGTAACTTTAATCAAGAAAGATTTGTTGCGGTTTGACAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGACGCCTAAAAACCTTAAAGGGTGGAAAAGGCGAGAAAGAAGATGATGAAGTGGAGATTGATGATGAAGAAAGGGAAAGTCCAATAACAGTCCCACTCATTCGCAA
GAGGAAAGGCGAGGAAGAGGCATCTGGGTCCAAGAAGAAGAAGAAGTATATGGCTAAGGACTCCAGTGACCCTATTCCTCTCGCGATTGAAAGCCCACCAAAACAAAAAA
AGCCTAAGTTCACCATCCTGCCTTCACCTCCCAAGGCAATAAAAGAACCACCACTTTTCCCCATAATCCAAATTCCTTCTCCCCACAAATCCAAAACGTCAAGCCCTATC
CACCAAGTCCAAATAATTACCACTCCCACTTCCCCACGGCAAAAGGAAAATCCTCAATCTCTTGTCGCTCAAGCCCTTGATCAAACTAACTTTTCGCCCAACATTGTTTT
TGATGCCCAACTTAATGAAGGGATTGATGACTTCATGCAAGAACTCTGCGATACAGACTTTGATGCTGAAGATTTCAGAGAAGCAAAGGACGCGACTCTAGTTCCTGATG
AGTCGCAACAAACAGAAGTTCTTGAGGAGCCAGTTGATGACCCACTCCCCAAAGGTAAAGAAATAGCCTTTGAGGAAGCTGGCAAAACGCGAGCTCCTTCACCGCCGAAG
CAAACAAAAGACCAACAAAACATTGCGGCGGAAGAAAATGAAGATGAAGACTTTTACAAGTTCATCAATGATGCGATTGGAAAGCCAATGATGGATGGACTTGAAGATAT
CTTCCAAAACCAACCTGATCTGCATGAACGCACGATAAGACATGAAAAACATATTTCAGACTTGGAGTTAAACATTGACAACCATCATCAATCCCAACATGACCAGCTCA
CCTCTGAGATTGTGAGCCTGAAGGAGCAAAATAAGGCGATGGTAACTTTAATCAAGAAAGATTTGTTGCGGTTTGACAGGTAA
Protein sequenceShow/hide protein sequence
MRRLKTLKGGKGEKEDDEVEIDDEERESPITVPLIRKRKGEEEASGSKKKKKYMAKDSSDPIPLAIESPPKQKKPKFTILPSPPKAIKEPPLFPIIQIPSPHKSKTSSPI
HQVQIITTPTSPRQKENPQSLVAQALDQTNFSPNIVFDAQLNEGIDDFMQELCDTDFDAEDFREAKDATLVPDESQQTEVLEEPVDDPLPKGKEIAFEEAGKTRAPSPPK
QTKDQQNIAAEENEDEDFYKFINDAIGKPMMDGLEDIFQNQPDLHERTIRHEKHISDLELNIDNHHQSQHDQLTSEIVSLKEQNKAMVTLIKKDLLRFDR