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PI0013350 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013350
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionBeta-galactosidase
Genome locationchr02:17545646..17545909
RNA-Seq ExpressionPI0013350
SyntenyPI0013350
Gene Ontology termsGO:0000723 - telomere maintenance (biological process)
GO:0006116 - NADH oxidation (biological process)
GO:0006303 - double-strand break repair via nonhomologous end joining (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0032508 - DNA duplex unwinding (biological process)
GO:0043564 - Ku70:Ku80 complex (cellular component)
GO:0003678 - DNA helicase activity (molecular function)
GO:0003684 - damaged DNA binding (molecular function)
GO:0003954 - NADH dehydrogenase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0005525 - GTP binding (molecular function)
GO:0016301 - kinase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
GO:0042162 - telomeric DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034386.1 Beta-galactosidase [Cucumis melo var. makuwa]3.6e-2878.57Show/hide
Query:  SIGNFPGEKLNEQNFFSWFQSIKMFLEGRQQFGFLISEIPRPPLGDDKKRLWKAEDSFIRSMLINSMESQIGKPFLYAATAKDL
        S GNF GEKLN QN+FSW QSIKMFLEGR QFGFL  EI RPP GD  +RLWK EDS IRSMLINSME QIGKP LYA TAKDL
Subjt:  SIGNFPGEKLNEQNFFSWFQSIKMFLEGRQQFGFLISEIPRPPLGDDKKRLWKAEDSFIRSMLINSMESQIGKPFLYAATAKDL
TYJ97256.1 Beta-galactosidase [Cucumis melo var. makuwa]3.6e-2878.57Show/hide
Query:  SIGNFPGEKLNEQNFFSWFQSIKMFLEGRQQFGFLISEIPRPPLGDDKKRLWKAEDSFIRSMLINSMESQIGKPFLYAATAKDL
        S GNF GEKLN QN+FSW QSIKMFLEGR QFGFL  EI RPP GD  +RLWK EDS IRSMLINSME QIGKP LYA TAKDL
Subjt:  SIGNFPGEKLNEQNFFSWFQSIKMFLEGRQQFGFLISEIPRPPLGDDKKRLWKAEDSFIRSMLINSMESQIGKPFLYAATAKDL
TYJ99952.1 Beta-galactosidase [Cucumis melo var. makuwa]3.6e-2878.57Show/hide
Query:  SIGNFPGEKLNEQNFFSWFQSIKMFLEGRQQFGFLISEIPRPPLGDDKKRLWKAEDSFIRSMLINSMESQIGKPFLYAATAKDL
        S GNF GEKLN QN+FSW QSIKMFLEGR QFGFL  EI RPP GD  +RLWK EDS IRSMLINSME QIGKP LYA TAKDL
Subjt:  SIGNFPGEKLNEQNFFSWFQSIKMFLEGRQQFGFLISEIPRPPLGDDKKRLWKAEDSFIRSMLINSMESQIGKPFLYAATAKDL
TYK08054.1 Beta-galactosidase [Cucumis melo var. makuwa]3.6e-2878.57Show/hide
Query:  SIGNFPGEKLNEQNFFSWFQSIKMFLEGRQQFGFLISEIPRPPLGDDKKRLWKAEDSFIRSMLINSMESQIGKPFLYAATAKDL
        S GNF GEKLN QN+FSW QSIKMFLEGR QFGFL  EI RPP GD  +RLWK EDS IRSMLINSME QIGKP LYA TAKDL
Subjt:  SIGNFPGEKLNEQNFFSWFQSIKMFLEGRQQFGFLISEIPRPPLGDDKKRLWKAEDSFIRSMLINSMESQIGKPFLYAATAKDL
TYK16957.1 ATP-dependent DNA helicase 2 subunit KU70 [Cucumis melo var. makuwa]3.6e-2878.57Show/hide
Query:  SIGNFPGEKLNEQNFFSWFQSIKMFLEGRQQFGFLISEIPRPPLGDDKKRLWKAEDSFIRSMLINSMESQIGKPFLYAATAKDL
        S GNF GEKLN QN+FSW QSIKMFLEGR QFGFL  EI RPP GD  +RLWK EDS IRSMLINSME QIGKP LYA TAKDL
Subjt:  SIGNFPGEKLNEQNFFSWFQSIKMFLEGRQQFGFLISEIPRPPLGDDKKRLWKAEDSFIRSMLINSMESQIGKPFLYAATAKDL
TrEMBL top hitse value%identityAlignment
A0A5A7SM64 Beta-galactosidase1.7e-2878.57Show/hide
Query:  SIGNFPGEKLNEQNFFSWFQSIKMFLEGRQQFGFLISEIPRPPLGDDKKRLWKAEDSFIRSMLINSMESQIGKPFLYAATAKDL
        S GNF GEKLN QN+FSW QSIKMFLEGR QFGFL  EI RPP GD  +RLWK EDS IRSMLINSME QIGKP LYA TAKDL
Subjt:  SIGNFPGEKLNEQNFFSWFQSIKMFLEGRQQFGFLISEIPRPPLGDDKKRLWKAEDSFIRSMLINSMESQIGKPFLYAATAKDL
A0A5A7UGB2 Beta-galactosidase1.7e-2878.57Show/hide
Query:  SIGNFPGEKLNEQNFFSWFQSIKMFLEGRQQFGFLISEIPRPPLGDDKKRLWKAEDSFIRSMLINSMESQIGKPFLYAATAKDL
        S GNF GEKLN QN+FSW QSIKMFLEGR QFGFL  EI RPP GD  +RLWK EDS IRSMLINSME QIGKP LYA TAKDL
Subjt:  SIGNFPGEKLNEQNFFSWFQSIKMFLEGRQQFGFLISEIPRPPLGDDKKRLWKAEDSFIRSMLINSMESQIGKPFLYAATAKDL
A0A5A7V0Y9 Beta-galactosidase1.7e-2878.57Show/hide
Query:  SIGNFPGEKLNEQNFFSWFQSIKMFLEGRQQFGFLISEIPRPPLGDDKKRLWKAEDSFIRSMLINSMESQIGKPFLYAATAKDL
        S GNF GEKLN QN+FSW QSIKMFLEGR QFGFL  EI RPP GD  +RLWK EDS IRSMLINSME QIGKP LYA TAKDL
Subjt:  SIGNFPGEKLNEQNFFSWFQSIKMFLEGRQQFGFLISEIPRPPLGDDKKRLWKAEDSFIRSMLINSMESQIGKPFLYAATAKDL
A0A5D3BJK7 Beta-galactosidase1.7e-2878.57Show/hide
Query:  SIGNFPGEKLNEQNFFSWFQSIKMFLEGRQQFGFLISEIPRPPLGDDKKRLWKAEDSFIRSMLINSMESQIGKPFLYAATAKDL
        S GNF GEKLN QN+FSW QSIKMFLEGR QFGFL  EI RPP GD  +RLWK EDS IRSMLINSME QIGKP LYA TAKDL
Subjt:  SIGNFPGEKLNEQNFFSWFQSIKMFLEGRQQFGFLISEIPRPPLGDDKKRLWKAEDSFIRSMLINSMESQIGKPFLYAATAKDL
A0A5D3C4T4 Beta-galactosidase1.7e-2878.57Show/hide
Query:  SIGNFPGEKLNEQNFFSWFQSIKMFLEGRQQFGFLISEIPRPPLGDDKKRLWKAEDSFIRSMLINSMESQIGKPFLYAATAKDL
        S GNF GEKLN QN+FSW QSIKMFLEGR QFGFL  EI RPP GD  +RLWK EDS IRSMLINSME QIGKP LYA TAKDL
Subjt:  SIGNFPGEKLNEQNFFSWFQSIKMFLEGRQQFGFLISEIPRPPLGDDKKRLWKAEDSFIRSMLINSMESQIGKPFLYAATAKDL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G21280.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).3.8e-0426.76Show/hide
Query:  NEQNFFSWFQSIKMFLEGRQQFGFLISEIPRPPLGDDKKRLWKAEDSFIRSMLINSMESQIGKPFLYAATA
        +E N+ +W    + FL   ++FGF+   +P+P       + W+  ++ +   L+NSM  ++ +  +YA TA
Subjt:  NEQNFFSWFQSIKMFLEGRQQFGFLISEIPRPPLGDDKKRLWKAEDSFIRSMLINSMESQIGKPFLYAATA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCCCTCCATAGGTAACTTTCCAGGAGAAAAACTAAATGAGCAAAATTTTTTCTCTTGGTTTCAATCGATCAAGATGTTTCTTGAGGGACGCCAACAATTTGGGTT
TCTGATTAGTGAGATTCCCCGTCCTCCACTTGGCGATGATAAAAAACGCCTCTGGAAAGCAGAAGACTCCTTTATTCGATCCATGTTGATCAACAGTATGGAATCTCAGA
TAGGCAAGCCCTTCCTGTATGCTGCTACTGCAAAGGATCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTCCCTCCATAGGTAACTTTCCAGGAGAAAAACTAAATGAGCAAAATTTTTTCTCTTGGTTTCAATCGATCAAGATGTTTCTTGAGGGACGCCAACAATTTGGGTT
TCTGATTAGTGAGATTCCCCGTCCTCCACTTGGCGATGATAAAAAACGCCTCTGGAAAGCAGAAGACTCCTTTATTCGATCCATGTTGATCAACAGTATGGAATCTCAGA
TAGGCAAGCCCTTCCTGTATGCTGCTACTGCAAAGGATCTCTAG
Protein sequenceShow/hide protein sequence
MVPSIGNFPGEKLNEQNFFSWFQSIKMFLEGRQQFGFLISEIPRPPLGDDKKRLWKAEDSFIRSMLINSMESQIGKPFLYAATAKDL