; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0013372 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013372
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionNBS-LRR type resistance protein
Genome locationchr07:9667574..9668900
RNA-Seq ExpressionPI0013372
SyntenyPI0013372
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025953.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]4.8e-0645.24Show/hide
Query:  YDHHVSLLPLAGLPLILPLPVKVKHGKVWR---------------PQGSPNQSGDPEGNTHQFGDPKETPISLVIPKETPISLV
        Y  H S L L GLPL +PLP K+K  K                  P+G   QS DPEG T+Q  DP+   ISLVIPK+TPI  V
Subjt:  YDHHVSLLPLAGLPLILPLPVKVKHGKVWR---------------PQGSPNQSGDPEGNTHQFGDPKETPISLVIPKETPISLV

KAA0040393.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]4.4e-0750.57Show/hide
Query:  YDHHVSLLPLAGLPLILPLPVK----------VKHGKVWRP-QGSPNQSGDPEGNTHQFGDPKETPISLVIPKETPISLVIPKKTHI
        Y  H S LPL GLPL +PLP K          V+H    R  +G   QS DPEG T+Q  DP E  ISLVIPK+  ISLVIPK  +I
Subjt:  YDHHVSLLPLAGLPLILPLPVK----------VKHGKVWRP-QGSPNQSGDPEGNTHQFGDPKETPISLVIPKETPISLVIPKKTHI

KAA0051800.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]1.3e-0646.43Show/hide
Query:  YDHHVSLLPLAGLPLILPLPVKVKHGKVWR-----PQGSPNQSGDPEGNTHQF----------GDPKETPISLVIPKETPISLV
        Y  H S LPL  LP ++PLP K+K  K +      P+G   QS DPEG T+QF           DPK+T ISL+I K+TPIS V
Subjt:  YDHHVSLLPLAGLPLILPLPVKVKHGKVWR-----PQGSPNQSGDPEGNTHQF----------GDPKETPISLVIPKETPISLV

KAA0067077.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]1.5e-0751.25Show/hide
Query:  YDHHVSLLPLAGLPLILPLPVKVKHGKVWRPQGS----PNQSGDPEGNTHQFGDPKETPISLVIPKETPISLVIPKKTHI
        Y  H S LPL GLPL       +  G + +   S     +QS DPEG T+Q  DPK TPISLVIPK+  ISLVIPK  HI
Subjt:  YDHHVSLLPLAGLPLILPLPVKVKHGKVWRPQGS----PNQSGDPEGNTHQFGDPKETPISLVIPKETPISLVIPKKTHI

TYJ98702.1 pol protein [Cucumis melo var. makuwa]4.4e-0750.57Show/hide
Query:  YDHHVSLLPLAGLPLILPLPVK----------VKHGKVWRP-QGSPNQSGDPEGNTHQFGDPKETPISLVIPKETPISLVIPKKTHI
        Y  H S LPL GLPL +PLP K          V+H    R  +G   QS DPEG T+Q  DP E  ISLVIPK+  ISLVIPK  +I
Subjt:  YDHHVSLLPLAGLPLILPLPVK----------VKHGKVWRP-QGSPNQSGDPEGNTHQFGDPKETPISLVIPKETPISLVIPKKTHI

TrEMBL top hitse value%identityAlignment
A0A5A7SMP6 NBS-LRR type resistance protein2.3e-0645.24Show/hide
Query:  YDHHVSLLPLAGLPLILPLPVKVKHGKVWR---------------PQGSPNQSGDPEGNTHQFGDPKETPISLVIPKETPISLV
        Y  H S L L GLPL +PLP K+K  K                  P+G   QS DPEG T+Q  DP+   ISLVIPK+TPI  V
Subjt:  YDHHVSLLPLAGLPLILPLPVKVKHGKVWR---------------PQGSPNQSGDPEGNTHQFGDPKETPISLVIPKETPISLV

A0A5A7TBD6 Ty3-gypsy retrotransposon protein2.1e-0750.57Show/hide
Query:  YDHHVSLLPLAGLPLILPLPVK----------VKHGKVWRP-QGSPNQSGDPEGNTHQFGDPKETPISLVIPKETPISLVIPKKTHI
        Y  H S LPL GLPL +PLP K          V+H    R  +G   QS DPEG T+Q  DP E  ISLVIPK+  ISLVIPK  +I
Subjt:  YDHHVSLLPLAGLPLILPLPVK----------VKHGKVWRP-QGSPNQSGDPEGNTHQFGDPKETPISLVIPKETPISLVIPKKTHI

A0A5A7U9F9 NBS-LRR type resistance protein6.2e-0746.43Show/hide
Query:  YDHHVSLLPLAGLPLILPLPVKVKHGKVWR-----PQGSPNQSGDPEGNTHQF----------GDPKETPISLVIPKETPISLV
        Y  H S LPL  LP ++PLP K+K  K +      P+G   QS DPEG T+QF           DPK+T ISL+I K+TPIS V
Subjt:  YDHHVSLLPLAGLPLILPLPVKVKHGKVWR-----PQGSPNQSGDPEGNTHQF----------GDPKETPISLVIPKETPISLV

A0A5D3BG13 Pol protein2.1e-0750.57Show/hide
Query:  YDHHVSLLPLAGLPLILPLPVK----------VKHGKVWRP-QGSPNQSGDPEGNTHQFGDPKETPISLVIPKETPISLVIPKKTHI
        Y  H S LPL GLPL +PLP K          V+H    R  +G   QS DPEG T+Q  DP E  ISLVIPK+  ISLVIPK  +I
Subjt:  YDHHVSLLPLAGLPLILPLPVK----------VKHGKVWRP-QGSPNQSGDPEGNTHQFGDPKETPISLVIPKETPISLVIPKKTHI

A0A5D3DRV9 NBS-LRR type resistance protein7.3e-0851.25Show/hide
Query:  YDHHVSLLPLAGLPLILPLPVKVKHGKVWRPQGS----PNQSGDPEGNTHQFGDPKETPISLVIPKETPISLVIPKKTHI
        Y  H S LPL GLPL       +  G + +   S     +QS DPEG T+Q  DPK TPISLVIPK+  ISLVIPK  HI
Subjt:  YDHHVSLLPLAGLPLILPLPVKVKHGKVWRPQGS----PNQSGDPEGNTHQFGDPKETPISLVIPKETPISLVIPKKTHI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATGCAGCGGAAGCAAACGACTACGCCTATGACCATCACGTGTCCCTCTTACCCCTCGCCGGTCTGCCGCTCATCTTACCTTTGCCTGTAAAAGTTAAACATGGAAA
GGTCTGGCGGCCCCAAGGCTCACCTAATCAGTCTGGTGATCCCGAAGGAAACACCCATCAGTTTGGTGATCCGAAGGAAACACCCATCAGTCTGGTGATCCCGAAGGAAA
CACCTATCAGTCTGGTGATCCCGAAGAAAACACATATCATGCATGCAGATGGTAGAGAAATCCCTTACCTCGGATGTGCTAAGTCCAAGTGCACTACGCGGCAAGCAAAG
TCTGAATCGCGAGGAAAGGTGAGCTCCAAACGCTTACTCCTCGGCGAGACCACAAATCTACGCGGCAAGACCAAACACAAGGCGAAAAGACTAAGACCCAAGATTCGGAG
AAGAATAAAAAACCAAACCGTAGCGAATGAAGACTTACCTCGCAGTCCAAGGGAGCTCGCGGTAAGAAGAGACGGGCAGAGGGTCTCAGAACGCGGCAAGACTCCTCAGC
TCGCAGACAAAGGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCATGCAGCGGAAGCAAACGACTACGCCTATGACCATCACGTGTCCCTCTTACCCCTCGCCGGTCTGCCGCTCATCTTACCTTTGCCTGTAAAAGTTAAACATGGAAA
GGTCTGGCGGCCCCAAGGCTCACCTAATCAGTCTGGTGATCCCGAAGGAAACACCCATCAGTTTGGTGATCCGAAGGAAACACCCATCAGTCTGGTGATCCCGAAGGAAA
CACCTATCAGTCTGGTGATCCCGAAGAAAACACATATCATGCATGCAGATGGTAGAGAAATCCCTTACCTCGGATGTGCTAAGTCCAAGTGCACTACGCGGCAAGCAAAG
TCTGAATCGCGAGGAAAGGTGAGCTCCAAACGCTTACTCCTCGGCGAGACCACAAATCTACGCGGCAAGACCAAACACAAGGCGAAAAGACTAAGACCCAAGATTCGGAG
AAGAATAAAAAACCAAACCGTAGCGAATGAAGACTTACCTCGCAGTCCAAGGGAGCTCGCGGTAAGAAGAGACGGGCAGAGGGTCTCAGAACGCGGCAAGACTCCTCAGC
TCGCAGACAAAGGGTAA
Protein sequenceShow/hide protein sequence
MHAAEANDYAYDHHVSLLPLAGLPLILPLPVKVKHGKVWRPQGSPNQSGDPEGNTHQFGDPKETPISLVIPKETPISLVIPKKTHIMHADGREIPYLGCAKSKCTTRQAK
SESRGKVSSKRLLLGETTNLRGKTKHKAKRLRPKIRRRIKNQTVANEDLPRSPRELAVRRDGQRVSERGKTPQLADKG