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PI0013429 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013429
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr11:21301151..21302329
RNA-Seq ExpressionPI0013429
SyntenyPI0013429
Gene Ontology termsGO:0048507 - meristem development (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038951.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.5e-8768.83Show/hide
Query:  MAPQLRHANDHLLPRRAHGSRWRDQFCVTRSATHVVSQYRYMFDLLQRDQ--------------------------------------------DVTQEY
        +APQL HAN+HLLP RA GSRW+DQFCVTR ATHVVSQYRYMFDLLQRDQ                                            DVTQEY
Subjt:  MAPQLRHANDHLLPRRAHGSRWRDQFCVTRSATHVVSQYRYMFDLLQRDQ--------------------------------------------DVTQEY

Query:  IHWYNNITRLYITRPGAAVDHLRSNNRRFRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEEVPPVTQTQSQTGY
        IHWYNNITRLYITRP AAV HLRSNN R RDVADDPQQVL+ICNNN+RYMEEIH MYD+ IVPPPV+RGRVRVEE ELDEVYHNVEEVPP TQTQSQTGY
Subjt:  IHWYNNITRLYITRPGAAVDHLRSNNRRFRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEEVPPVTQTQSQTGY

Query:  GSPMMMMPVFGARYCDFEVGTGYNDSGVGLSSSYMDAGPSTSYMHGH
        GSPM MMP FGA Y D EVGTGY D+G+  SS YMD GPS  YMHGH
Subjt:  GSPMMMMPVFGARYCDFEVGTGYNDSGVGLSSSYMDAGPSTSYMHGH

KAA0062642.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.7e-6581.53Show/hide
Query:  QRDQDVTQEYIHWYNNITRLYITRPGAAVDHLRSNNRRFRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEEVPP
        Q D+DVTQEYIHWY+NITRLYITRPGAAV   RSNN R RDVADD QQ LDICNNNERYMEEIH MYD+PIVPPPV+RG VRVEE ELD+VYHNVEEVP 
Subjt:  QRDQDVTQEYIHWYNNITRLYITRPGAAVDHLRSNNRRFRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEEVPP

Query:  VTQTQSQTGYGSPMMMMPVFGARYCDFEVGTGYNDSGVGLSSSYMDAGPSTSYMHGH
         TQTQSQTGYGSPM MMP F A YCDFEVG GY D+GVG SSSY+D  PSTSYMHGH
Subjt:  VTQTQSQTGYGSPMMMMPVFGARYCDFEVGTGYNDSGVGLSSSYMDAGPSTSYMHGH

TYK11193.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.2e-7965.99Show/hide
Query:  MAPQLRHANDHLLPRRAHGSRWRDQFCVTRSATHVVSQYRYMFDLLQRDQ--------------------------------------------DVTQEY
        +APQL HAN+HLLP RA GS         R ATHVVSQYRYMFDLLQRDQ                                            DVTQEY
Subjt:  MAPQLRHANDHLLPRRAHGSRWRDQFCVTRSATHVVSQYRYMFDLLQRDQ--------------------------------------------DVTQEY

Query:  IHWYNNITRLYITRPGAAVDHLRSNNRRFRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEEVPPVTQTQSQTGY
        IHWYNNITRLYITRPGAAV HLRSNN R RDVADDPQQVL+ICNNN+RYMEEIH MYD+ IVPPPV+RGRVRVEE ELDEVYHNVEEVPP TQTQSQTGY
Subjt:  IHWYNNITRLYITRPGAAVDHLRSNNRRFRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEEVPPVTQTQSQTGY

Query:  GSPMMMMPVFGARYCDFEVGTGYNDSGVGLSSSYMDAGPSTSYMHGH
        GSPM MMP FGA Y D EVGTGY D+G+  SS YMD GPS  YMHGH
Subjt:  GSPMMMMPVFGARYCDFEVGTGYNDSGVGLSSSYMDAGPSTSYMHGH

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]2.5e-8060.66Show/hide
Query:  MAPQLRHANDHLLPRRAHGSRWRDQFCVTRSATHVVSQYRYMFDLLQRDQ--------------------------------------------------
        +APQL H NDHLL  RA GSRWRDQFCV RSAT+VV+QYRYMFDLLQRDQ                                                  
Subjt:  MAPQLRHANDHLLPRRAHGSRWRDQFCVTRSATHVVSQYRYMFDLLQRDQ--------------------------------------------------

Query:  -------------------DVTQEYIHWYNNITRLYITRPGAAVDHLRSNNRRFRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEE
                           DVTQEYIH YNNITRLYITRPGA V HLRSNN R RDV +DPQQVLDICNNNERYME+IH +YD+PIVPPPV+R R RVEE
Subjt:  -------------------DVTQEYIHWYNNITRLYITRPGAAVDHLRSNNRRFRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEE

Query:  PELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMPVFGARYCDFEVGTGYNDSGVGLSSSYMDAGPSTSYMHGH
         ELDEVYHNVEEVPP TQTQSQTGYGSPM MMP FGA YCD EV  GY D+ VG  SSYMD GPSTSYM+GH
Subjt:  PELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMPVFGARYCDFEVGTGYNDSGVGLSSSYMDAGPSTSYMHGH

TYK27427.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.5e-5848.47Show/hide
Query:  MAPQLRHANDHLLPRRAHGSRWRDQFCVTRSATHVVSQYRYMFDLLQR----------------------------------------------------
        +APQL H N + L  RA+GSRWRDQFCVTRSATHVVSQYRYMFDLLQ                                                     
Subjt:  MAPQLRHANDHLLPRRAHGSRWRDQFCVTRSATHVVSQYRYMFDLLQR----------------------------------------------------

Query:  ------------------------DQDVTQEYIHWYNNITRLYITRPGAAVDHLRSNNRRFRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNR
                                D DVTQEYIHWY NI++LYIT+PGAA+ HLRSNN R R++ADDPQQVL+ICN+NE+YME IHYMYDVPIVP PV R
Subjt:  ------------------------DQDVTQEYIHWYNNITRLYITRPGAAVDHLRSNNRRFRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNR

Query:  GRVRVEE-PELDEVYHNVEEVPPVTQTQSQT--GYGSPMMMMPVFGARYCDFEV------GTGYNDSGVGLSSS-----YMDAG--PSTSYMHGH
         R  V+E  +L+EV  + EEVPP+TQTQ+Q+   Y SP+MMMP FG  Y D  V      G GY +S  G SS+     Y D G  PS+SYMHGH
Subjt:  GRVRVEE-PELDEVYHNVEEVPPVTQTQSQT--GYGSPMMMMPVFGARYCDFEV------GTGYNDSGVGLSSS-----YMDAG--PSTSYMHGH

TrEMBL top hitse value%identityAlignment
A0A5A7TBF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.7e-8768.83Show/hide
Query:  MAPQLRHANDHLLPRRAHGSRWRDQFCVTRSATHVVSQYRYMFDLLQRDQ--------------------------------------------DVTQEY
        +APQL HAN+HLLP RA GSRW+DQFCVTR ATHVVSQYRYMFDLLQRDQ                                            DVTQEY
Subjt:  MAPQLRHANDHLLPRRAHGSRWRDQFCVTRSATHVVSQYRYMFDLLQRDQ--------------------------------------------DVTQEY

Query:  IHWYNNITRLYITRPGAAVDHLRSNNRRFRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEEVPPVTQTQSQTGY
        IHWYNNITRLYITRP AAV HLRSNN R RDVADDPQQVL+ICNNN+RYMEEIH MYD+ IVPPPV+RGRVRVEE ELDEVYHNVEEVPP TQTQSQTGY
Subjt:  IHWYNNITRLYITRPGAAVDHLRSNNRRFRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEEVPPVTQTQSQTGY

Query:  GSPMMMMPVFGARYCDFEVGTGYNDSGVGLSSSYMDAGPSTSYMHGH
        GSPM MMP FGA Y D EVGTGY D+G+  SS YMD GPS  YMHGH
Subjt:  GSPMMMMPVFGARYCDFEVGTGYNDSGVGLSSSYMDAGPSTSYMHGH

A0A5A7V342 Mediator of RNA polymerase II transcription subunit 12-like isoform X18.3e-6681.53Show/hide
Query:  QRDQDVTQEYIHWYNNITRLYITRPGAAVDHLRSNNRRFRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEEVPP
        Q D+DVTQEYIHWY+NITRLYITRPGAAV   RSNN R RDVADD QQ LDICNNNERYMEEIH MYD+PIVPPPV+RG VRVEE ELD+VYHNVEEVP 
Subjt:  QRDQDVTQEYIHWYNNITRLYITRPGAAVDHLRSNNRRFRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEEVPP

Query:  VTQTQSQTGYGSPMMMMPVFGARYCDFEVGTGYNDSGVGLSSSYMDAGPSTSYMHGH
         TQTQSQTGYGSPM MMP F A YCDFEVG GY D+GVG SSSY+D  PSTSYMHGH
Subjt:  VTQTQSQTGYGSPMMMMPVFGARYCDFEVGTGYNDSGVGLSSSYMDAGPSTSYMHGH

A0A5D3CH23 Mediator of RNA polymerase II transcription subunit 12-like isoform X15.9e-8065.99Show/hide
Query:  MAPQLRHANDHLLPRRAHGSRWRDQFCVTRSATHVVSQYRYMFDLLQRDQ--------------------------------------------DVTQEY
        +APQL HAN+HLLP RA GS         R ATHVVSQYRYMFDLLQRDQ                                            DVTQEY
Subjt:  MAPQLRHANDHLLPRRAHGSRWRDQFCVTRSATHVVSQYRYMFDLLQRDQ--------------------------------------------DVTQEY

Query:  IHWYNNITRLYITRPGAAVDHLRSNNRRFRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEEVPPVTQTQSQTGY
        IHWYNNITRLYITRPGAAV HLRSNN R RDVADDPQQVL+ICNNN+RYMEEIH MYD+ IVPPPV+RGRVRVEE ELDEVYHNVEEVPP TQTQSQTGY
Subjt:  IHWYNNITRLYITRPGAAVDHLRSNNRRFRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEEVPPVTQTQSQTGY

Query:  GSPMMMMPVFGARYCDFEVGTGYNDSGVGLSSSYMDAGPSTSYMHGH
        GSPM MMP FGA Y D EVGTGY D+G+  SS YMD GPS  YMHGH
Subjt:  GSPMMMMPVFGARYCDFEVGTGYNDSGVGLSSSYMDAGPSTSYMHGH

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein1.2e-8060.66Show/hide
Query:  MAPQLRHANDHLLPRRAHGSRWRDQFCVTRSATHVVSQYRYMFDLLQRDQ--------------------------------------------------
        +APQL H NDHLL  RA GSRWRDQFCV RSAT+VV+QYRYMFDLLQRDQ                                                  
Subjt:  MAPQLRHANDHLLPRRAHGSRWRDQFCVTRSATHVVSQYRYMFDLLQRDQ--------------------------------------------------

Query:  -------------------DVTQEYIHWYNNITRLYITRPGAAVDHLRSNNRRFRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEE
                           DVTQEYIH YNNITRLYITRPGA V HLRSNN R RDV +DPQQVLDICNNNERYME+IH +YD+PIVPPPV+R R RVEE
Subjt:  -------------------DVTQEYIHWYNNITRLYITRPGAAVDHLRSNNRRFRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEE

Query:  PELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMPVFGARYCDFEVGTGYNDSGVGLSSSYMDAGPSTSYMHGH
         ELDEVYHNVEEVPP TQTQSQTGYGSPM MMP FGA YCD EV  GY D+ VG  SSYMD GPSTSYM+GH
Subjt:  PELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMPVFGARYCDFEVGTGYNDSGVGLSSSYMDAGPSTSYMHGH

A0A5D3DUI1 Mediator of RNA polymerase II transcription subunit 12-like isoform X17.5e-5948.47Show/hide
Query:  MAPQLRHANDHLLPRRAHGSRWRDQFCVTRSATHVVSQYRYMFDLLQR----------------------------------------------------
        +APQL H N + L  RA+GSRWRDQFCVTRSATHVVSQYRYMFDLLQ                                                     
Subjt:  MAPQLRHANDHLLPRRAHGSRWRDQFCVTRSATHVVSQYRYMFDLLQR----------------------------------------------------

Query:  ------------------------DQDVTQEYIHWYNNITRLYITRPGAAVDHLRSNNRRFRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNR
                                D DVTQEYIHWY NI++LYIT+PGAA+ HLRSNN R R++ADDPQQVL+ICN+NE+YME IHYMYDVPIVP PV R
Subjt:  ------------------------DQDVTQEYIHWYNNITRLYITRPGAAVDHLRSNNRRFRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNR

Query:  GRVRVEE-PELDEVYHNVEEVPPVTQTQSQT--GYGSPMMMMPVFGARYCDFEV------GTGYNDSGVGLSSS-----YMDAG--PSTSYMHGH
         R  V+E  +L+EV  + EEVPP+TQTQ+Q+   Y SP+MMMP FG  Y D  V      G GY +S  G SS+     Y D G  PS+SYMHGH
Subjt:  GRVRVEE-PELDEVYHNVEEVPPVTQTQSQT--GYGSPMMMMPVFGARYCDFEV------GTGYNDSGVGLSSS-----YMDAG--PSTSYMHGH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCCCAACTAAGACATGCAAACGATCATCTACTACCTAGACGAGCACACGGTTCACGATGGAGAGACCAATTTTGTGTAACAAGATCAGCTACTCATGTAGTTAG
TCAATATAGGTACATGTTTGATCTTCTTCAGCGTGATCAAGATGTGACTCAAGAATACATCCACTGGTATAATAATATTACGAGGCTCTACATCACTCGACCAGGAGCAG
CTGTAGATCATCTGAGATCGAACAACAGAAGATTTCGTGATGTTGCAGATGATCCACAACAAGTCCTTGATATATGTAATAATAATGAGAGGTACATGGAGGAGATACAT
TATATGTACGATGTACCTATTGTACCTCCACCAGTTAATAGGGGACGTGTTCGAGTGGAAGAACCTGAACTCGATGAAGTTTACCATAACGTAGAAGAAGTACCTCCAGT
GACACAAACACAGAGCCAAACTGGTTATGGTAGCCCGATGATGATGATGCCAGTTTTTGGAGCAAGATATTGTGATTTTGAGGTCGGTACAGGATATAATGACTCAGGGG
TCGGTCTATCGTCTTCATACATGGATGCCGGACCATCAACTTCTTACATGCATGGACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCCCAACTAAGACATGCAAACGATCATCTACTACCTAGACGAGCACACGGTTCACGATGGAGAGACCAATTTTGTGTAACAAGATCAGCTACTCATGTAGTTAG
TCAATATAGGTACATGTTTGATCTTCTTCAGCGTGATCAAGATGTGACTCAAGAATACATCCACTGGTATAATAATATTACGAGGCTCTACATCACTCGACCAGGAGCAG
CTGTAGATCATCTGAGATCGAACAACAGAAGATTTCGTGATGTTGCAGATGATCCACAACAAGTCCTTGATATATGTAATAATAATGAGAGGTACATGGAGGAGATACAT
TATATGTACGATGTACCTATTGTACCTCCACCAGTTAATAGGGGACGTGTTCGAGTGGAAGAACCTGAACTCGATGAAGTTTACCATAACGTAGAAGAAGTACCTCCAGT
GACACAAACACAGAGCCAAACTGGTTATGGTAGCCCGATGATGATGATGCCAGTTTTTGGAGCAAGATATTGTGATTTTGAGGTCGGTACAGGATATAATGACTCAGGGG
TCGGTCTATCGTCTTCATACATGGATGCCGGACCATCAACTTCTTACATGCATGGACATTGA
Protein sequenceShow/hide protein sequence
MAPQLRHANDHLLPRRAHGSRWRDQFCVTRSATHVVSQYRYMFDLLQRDQDVTQEYIHWYNNITRLYITRPGAAVDHLRSNNRRFRDVADDPQQVLDICNNNERYMEEIH
YMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMPVFGARYCDFEVGTGYNDSGVGLSSSYMDAGPSTSYMHGH