CuGenDBv2

Gene ID	PI0013462
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	protein TAPETUM DETERMINANT 1-like
Genome location	chr08:21306319..21307382
RNA-Seq Expression	PI0013462
Synteny	PI0013462
Gene Ontology terms	NA
InterPro domains	IPR040361 - Tapetum determinant 1

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7026828.1 Protein TAPETUM DETERMINANT 1, partial [Cucurbita argyrosperma subsp. argyrosperma]

3.2e-34

65.57

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Query:  MAIFVKLVAALLVLSLISTGNCQCVLKNITISQRMTGFQIHGMTEWNVTITNNCLCSQSDLKLDCQGFATTLSIDPSILAISDNECLVNN----------
        MA F+KL AALL +SL+  GNCQCV  +I ISQ+MTGFQIHGMTEWNVTI+NNCLCSQS++KLDC+GF TT SIDPSILA++D ECLVNN          
Subjt:  MAIFVKLVAALLVLSLISTGNCQCVLKNITISQRMTGFQIHGMTEWNVTITNNCLCSQSDLKLDCQGFATTLSIDPSILAISDNECLVNN----------

Query:  ---VCTNPKFNFKPISSQISCS
              +PKF+FK ISSQI+CS
Subjt:  ---VCTNPKFNFKPISSQISCS

XP_008440637.1 PREDICTED: protein TAPETUM DETERMINANT 1-like [Cucumis melo]

3.8e-43

78.69

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Query:  MAIFVKLVAALLVLSLISTGNCQCVLKNITISQRMTGFQIHGMTEWNVTITNNCLCSQSDLKLDCQGFATTLSIDPSILAISDNECLVNN----------
        MAI VKL+AALLVLS ISTGNCQCVL NITISQ+MTGFQIHGMTEW+VTITNNC+CSQSDLKLDC+GFATTLSIDPSIL+ISDNECLVNN          
Subjt:  MAIFVKLVAALLVLSLISTGNCQCVLKNITISQRMTGFQIHGMTEWNVTITNNCLCSQSDLKLDCQGFATTLSIDPSILAISDNECLVNN----------

Query:  ---VCTNPKFNFKPISSQISCS
               PKFNFKPISSQISCS
Subjt:  ---VCTNPKFNFKPISSQISCS

XP_022962948.1 uncharacterized protein At1g05835-like [Cucurbita moschata]

2.3e-32

63.93

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Query:  MAIFVKLVAALLVLSLISTGNCQCVLKNITISQRMTGFQIHGMTEWNVTITNNCLCSQSDLKLDCQGFATTLSIDPSILAISDNECLVNN----------
        MA   KL AALL +S +S  N QC L NITI Q MTGFQIHGMTEWN T++NNCLCSQS++KLDC+GF TT SIDP ILAI+D ECLVNN          
Subjt:  MAIFVKLVAALLVLSLISTGNCQCVLKNITISQRMTGFQIHGMTEWNVTITNNCLCSQSDLKLDCQGFATTLSIDPSILAISDNECLVNN----------

Query:  ---VCTNPKFNFKPISSQISCS
              NP+FNFKPISSQI+CS
Subjt:  ---VCTNPKFNFKPISSQISCS

XP_031742370.1 uncharacterized protein At1g05835-like [Cucumis sativus]

3.5e-41

76.23

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Query:  MAIFVKLVAALLVLSLISTGNCQCVLKNITISQRMTGFQIHGMTEWNVTITNNCLCSQSDLKLDCQGFATTLSIDPSILAISDNECLVNN----------
        M IF KL+AALLVLSLISTGNCQC L NI ISQ MTGFQIHGMTEW VTITNNC+CSQSDLKLDC+GFATTLSIDPSILAISD+ECLVNN          
Subjt:  MAIFVKLVAALLVLSLISTGNCQCVLKNITISQRMTGFQIHGMTEWNVTITNNCLCSQSDLKLDCQGFATTLSIDPSILAISDNECLVNN----------

Query:  ---VCTNPKFNFKPISSQISCS
              +PKFNFKP+SSQISCS
Subjt:  ---VCTNPKFNFKPISSQISCS

XP_038881121.1 uncharacterized protein At1g05835-like [Benincasa hispida]

1.9e-39

72.13

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Query:  MAIFVKLVAALLVLSLISTGNCQCVLKNITISQRMTGFQIHGMTEWNVTITNNCLCSQSDLKLDCQGFATTLSIDPSILAISDNECLVNN----------
        MAIFVKLV ALLVLSL+STGNCQC+L NITISQRMTGFQIHGMTEW VTI+NNC CSQS++K+DC+GF TT SIDPSILA+ D ECLVNN          
Subjt:  MAIFVKLVAALLVLSLISTGNCQCVLKNITISQRMTGFQIHGMTEWNVTITNNCLCSQSDLKLDCQGFATTLSIDPSILAISDNECLVNN----------

Query:  ---VCTNPKFNFKPISSQISCS
              +P+FNFKPISSQISCS
Subjt:  ---VCTNPKFNFKPISSQISCS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KLZ6 Uncharacterized protein

1.7e-41

76.23

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Query:  MAIFVKLVAALLVLSLISTGNCQCVLKNITISQRMTGFQIHGMTEWNVTITNNCLCSQSDLKLDCQGFATTLSIDPSILAISDNECLVNN----------
        M IF KL+AALLVLSLISTGNCQC L NI ISQ MTGFQIHGMTEW VTITNNC+CSQSDLKLDC+GFATTLSIDPSILAISD+ECLVNN          
Subjt:  MAIFVKLVAALLVLSLISTGNCQCVLKNITISQRMTGFQIHGMTEWNVTITNNCLCSQSDLKLDCQGFATTLSIDPSILAISDNECLVNN----------

Query:  ---VCTNPKFNFKPISSQISCS
              +PKFNFKP+SSQISCS
Subjt:  ---VCTNPKFNFKPISSQISCS

A0A1S3B1L8 protein TAPETUM DETERMINANT 1-like

1.8e-43

78.69

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Query:  MAIFVKLVAALLVLSLISTGNCQCVLKNITISQRMTGFQIHGMTEWNVTITNNCLCSQSDLKLDCQGFATTLSIDPSILAISDNECLVNN----------
        MAI VKL+AALLVLS ISTGNCQCVL NITISQ+MTGFQIHGMTEW+VTITNNC+CSQSDLKLDC+GFATTLSIDPSIL+ISDNECLVNN          
Subjt:  MAIFVKLVAALLVLSLISTGNCQCVLKNITISQRMTGFQIHGMTEWNVTITNNCLCSQSDLKLDCQGFATTLSIDPSILAISDNECLVNN----------

Query:  ---VCTNPKFNFKPISSQISCS
               PKFNFKPISSQISCS
Subjt:  ---VCTNPKFNFKPISSQISCS

A0A5D3CMA8 Protein TAPETUM DETERMINANT 1-like

1.8e-43

78.69

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Query:  MAIFVKLVAALLVLSLISTGNCQCVLKNITISQRMTGFQIHGMTEWNVTITNNCLCSQSDLKLDCQGFATTLSIDPSILAISDNECLVNN----------
        MAI VKL+AALLVLS ISTGNCQCVL NITISQ+MTGFQIHGMTEW+VTITNNC+CSQSDLKLDC+GFATTLSIDPSIL+ISDNECLVNN          
Subjt:  MAIFVKLVAALLVLSLISTGNCQCVLKNITISQRMTGFQIHGMTEWNVTITNNCLCSQSDLKLDCQGFATTLSIDPSILAISDNECLVNN----------

Query:  ---VCTNPKFNFKPISSQISCS
               PKFNFKPISSQISCS
Subjt:  ---VCTNPKFNFKPISSQISCS

A0A6J1HGA0 uncharacterized protein At1g05835-like

1.1e-32

63.93

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Query:  MAIFVKLVAALLVLSLISTGNCQCVLKNITISQRMTGFQIHGMTEWNVTITNNCLCSQSDLKLDCQGFATTLSIDPSILAISDNECLVNN----------
        MA   KL AALL +S +S  N QC L NITI Q MTGFQIHGMTEWN T++NNCLCSQS++KLDC+GF TT SIDP ILAI+D ECLVNN          
Subjt:  MAIFVKLVAALLVLSLISTGNCQCVLKNITISQRMTGFQIHGMTEWNVTITNNCLCSQSDLKLDCQGFATTLSIDPSILAISDNECLVNN----------

Query:  ---VCTNPKFNFKPISSQISCS
              NP+FNFKPISSQI+CS
Subjt:  ---VCTNPKFNFKPISSQISCS

A0A6J1KP98 protein TAPETUM DETERMINANT 1-like

5.5e-32

62.3

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Query:  MAIFVKLVAALLVLSLISTGNCQCVLKNITISQRMTGFQIHGMTEWNVTITNNCLCSQSDLKLDCQGFATTLSIDPSILAISDNECLVNN----------
        MA F KL AALL +SL+  GNCQCV  +I I Q M+GFQIHGMTEWNVTI+N CLCSQS++KLDC+GF TT SIDPS+LA++D+ECLVNN          
Subjt:  MAIFVKLVAALLVLSLISTGNCQCVLKNITISQRMTGFQIHGMTEWNVTITNNCLCSQSDLKLDCQGFATTLSIDPSILAISDNECLVNN----------

Query:  ---VCTNPKFNFKPISSQISCS
              +PKF+FK ISSQI+CS
Subjt:  ---VCTNPKFNFKPISSQISCS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G32090.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein

5.3e-11

32.23

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Query:  MAIFVKLVAALLVLSLISTGNCQCVLKNITISQRMTGFQIHGMTEWNVTITNNCLCSQSDLKLDCQGFATTLSIDPSILAISDNECLVNNVCTNP-----
        MA  +K    +L+LS++S G C C    I I    TG +I G  EW VT+ N C C Q  + L C GFA    + P +L    N CL+      P     
Subjt:  MAIFVKLVAALLVLSLISTGNCQCVLKNITISQRMTGFQIHGMTEWNVTITNNCLCSQSDLKLDCQGFATTLSIDPSILAISDNECLVNNVCTNP-----

Query:  -------KFNFKPISSQISCS
                + F+P+ S++  S
Subjt:  -------KFNFKPISSQISCS

Sequences

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CDS sequence

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ATGGCCATCTTTGTCAAGCTTGTCGCTGCCCTTCTTGTCCTCTCTCTCATTTCCACGGGAAACTGCCAGTGTGTATTGAAAAACATAACAATCAGCCAAAGGATGACAGG
ATTTCAGATCCATGGAATGACAGAATGGAACGTAACAATAACCAACAACTGCTTATGTTCTCAATCTGATTTGAAACTAGATTGCCAAGGCTTTGCAACTACTCTAAGCA
TTGATCCTTCCATCTTAGCCATTTCTGATAACGAGTGTTTAGTCAACAATGTATGCACAAACCCCAAATTCAATTTCAAGCCTATCTCCTCCCAGATTTCTTGTTCTTAA

mRNA sequence

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Protein sequence

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MAIFVKLVAALLVLSLISTGNCQCVLKNITISQRMTGFQIHGMTEWNVTITNNCLCSQSDLKLDCQGFATTLSIDPSILAISDNECLVNNVCTNPKFNFKPISSQISCS

PI0013462 (gene) of Melon (PI 482460) v1 genome