CuGenDBv2

Gene ID	PI0013488
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Mediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome location	chr05:17953447..17953981
RNA-Seq Expression	PI0013488
Synteny	PI0013488
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0034939.1 uncharacterized protein E6C27_scaffold434G00020 [Cucumis melo var. makuwa]

1.7e-33

75.96

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Query:  MVHLYVNVSRMSLDINLNSEPFGQFEARTQLIDPNSEPVASLINDDEEMVANNEYRNFRIETDDEFEEFDFDDREHELPSNTFTQLDMDVIDSIHEHDPI
        MVHLY NVSR+ LDINLNSEPFGQ E RTQ+I  +SE VAS + DDEEMV NNEY +FR +TDDEFEEFDFD  EHELPSNT TQ+DMDVIDSI EHDPI
Subjt:  MVHLYVNVSRMSLDINLNSEPFGQFEARTQLIDPNSEPVASLINDDEEMVANNEYRNFRIETDDEFEEFDFDDREHELPSNTFTQLDMDVIDSIHEHDPI

Query:  VASI
        VA +
Subjt:  VASI

KAA0040603.1 uncharacterized protein E6C27_scaffold262G001800 [Cucumis melo var. makuwa]

1.7e-33

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Query:  MVHLYVNVSRMSLDINLNSEPFGQFEARTQLIDPNSEPVASLINDDEEMVANNEYRNFRIETDDEFEEFDFDDREHELPSNTFTQLDMDVIDSIHEHDPI
        MVHLYVNVSR+ LDINLNSEPFGQ E RTQ+I P+SE V S + DDEE+V NNEY +FR ETDDEFEEFDFD  EHELPSNT TQ+DMDVIDSI EH+PI
Subjt:  MVHLYVNVSRMSLDINLNSEPFGQFEARTQLIDPNSEPVASLINDDEEMVANNEYRNFRIETDDEFEEFDFDDREHELPSNTFTQLDMDVIDSIHEHDPI

Query:  VASI
        V  +
Subjt:  VASI

KAA0060519.1 uncharacterized protein E6C27_scaffold22G003730 [Cucumis melo var. makuwa]

3.1e-35

75.96

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Query:  MVHLYVNVSRMSLDINLNSEPFGQFEARTQLIDPNSEPVASLINDDEEMVANNEYRNFRIETDDEFEEFDFDDREHELPSNTFTQLDMDVIDSIHEHDPI
        MVHLYVNVSRM LDIN+NSEPFGQ E +TQ+I P++E VAS + DDEEMVANNEY +F+ ETDDEFEEFDFD REHELPSNT TQ++MDVIDSI EHDPI
Subjt:  MVHLYVNVSRMSLDINLNSEPFGQFEARTQLIDPNSEPVASLINDDEEMVANNEYRNFRIETDDEFEEFDFDDREHELPSNTFTQLDMDVIDSIHEHDPI

Query:  VASI
        V+ +
Subjt:  VASI

KAA0062731.1 uncharacterized protein E6C27_scaffold382G00620 [Cucumis melo var. makuwa]

3.4e-34

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Query:  MVHLYVNVSRMSLDINLNSEPFGQFEARTQLIDPNSEPVASLINDDEEMVANNEYRNFRIETDDEFEEFDFDDREHELPSNTFTQLDMDVIDSIHEHDPI
        MVHLYVNVSR+ LDINLNSEPFGQ E R Q+I P++E VASL+ +DEEMVANNEY +FR ET+D+FEEFDFD  EHELPSNT TQ+DMDVIDSI EHDPI
Subjt:  MVHLYVNVSRMSLDINLNSEPFGQFEARTQLIDPNSEPVASLINDDEEMVANNEYRNFRIETDDEFEEFDFDDREHELPSNTFTQLDMDVIDSIHEHDPI

Query:  VASI
        V  +
Subjt:  VASI

KAA0066696.1 uncharacterized protein E6C27_scaffold271G00290 [Cucumis melo var. makuwa]

2.6e-34

76.92

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Query:  MVHLYVNVSRMSLDINLNSEPFGQFEARTQLIDPNSEPVASLINDDEEMVANNEYRNFRIETDDEFEEFDFDDREHELPSNTFTQLDMDVIDSIHEHDPI
        MVHLYVNVSR+ LDINLNSEPF Q E RTQ+I P+SE VAS + DDEEMVANNEY +F+ E DDEFEEFDFD REHELP NT TQ+DMDVIDSI EHDPI
Subjt:  MVHLYVNVSRMSLDINLNSEPFGQFEARTQLIDPNSEPVASLINDDEEMVANNEYRNFRIETDDEFEEFDFDDREHELPSNTFTQLDMDVIDSIHEHDPI

Query:  VASI
        VA +
Subjt:  VASI

TrEMBL top hits

e value

%identity

Alignment

A0A5A7V456 Uncharacterized protein

1.5e-35

75.96

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Query:  MVHLYVNVSRMSLDINLNSEPFGQFEARTQLIDPNSEPVASLINDDEEMVANNEYRNFRIETDDEFEEFDFDDREHELPSNTFTQLDMDVIDSIHEHDPI
        MVHLYVNVSRM LDIN+NSEPFGQ E +TQ+I P++E VAS + DDEEMVANNEY +F+ ETDDEFEEFDFD REHELPSNT TQ++MDVIDSI EHDPI
Subjt:  MVHLYVNVSRMSLDINLNSEPFGQFEARTQLIDPNSEPVASLINDDEEMVANNEYRNFRIETDDEFEEFDFDDREHELPSNTFTQLDMDVIDSIHEHDPI

Query:  VASI
        V+ +
Subjt:  VASI

A0A5A7VAN3 Uncharacterized protein

1.7e-34

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Query:  MVHLYVNVSRMSLDINLNSEPFGQFEARTQLIDPNSEPVASLINDDEEMVANNEYRNFRIETDDEFEEFDFDDREHELPSNTFTQLDMDVIDSIHEHDPI
        MVHLYVNVSR+ LDINLNSEPFGQ E R Q+I P++E VASL+ +DEEMVANNEY +FR ET+D+FEEFDFD  EHELPSNT TQ+DMDVIDSI EHDPI
Subjt:  MVHLYVNVSRMSLDINLNSEPFGQFEARTQLIDPNSEPVASLINDDEEMVANNEYRNFRIETDDEFEEFDFDDREHELPSNTFTQLDMDVIDSIHEHDPI

Query:  VASI
        V  +
Subjt:  VASI

A0A5D3C2N3 Uncharacterized protein

8.2e-34

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Query:  MVHLYVNVSRMSLDINLNSEPFGQFEARTQLIDPNSEPVASLINDDEEMVANNEYRNFRIETDDEFEEFDFDDREHELPSNTFTQLDMDVIDSIHEHDPI
        MVHLYVNVSR+ LDINLNSEPFGQ E RTQ+I P+SE V S + DDEE+V NNEY +FR ETDDEFEEFDFD  EHELPSNT TQ+DMDVIDSI EH+PI
Subjt:  MVHLYVNVSRMSLDINLNSEPFGQFEARTQLIDPNSEPVASLINDDEEMVANNEYRNFRIETDDEFEEFDFDDREHELPSNTFTQLDMDVIDSIHEHDPI

Query:  VASI
        V  +
Subjt:  VASI

A0A5D3DCI2 Uncharacterized protein

8.2e-34

75.96

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Query:  MVHLYVNVSRMSLDINLNSEPFGQFEARTQLIDPNSEPVASLINDDEEMVANNEYRNFRIETDDEFEEFDFDDREHELPSNTFTQLDMDVIDSIHEHDPI
        MVHLY NVSR+ LDINLNSEPFGQ E RTQ+I  +SE VAS + DDEEMV NNEY +FR +TDDEFEEFDFD  EHELPSNT TQ+DMDVIDSI EHDPI
Subjt:  MVHLYVNVSRMSLDINLNSEPFGQFEARTQLIDPNSEPVASLINDDEEMVANNEYRNFRIETDDEFEEFDFDDREHELPSNTFTQLDMDVIDSIHEHDPI

Query:  VASI
        VA +
Subjt:  VASI

A0A5D3DVS6 Uncharacterized protein

1.3e-34

76.92

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Query:  MVHLYVNVSRMSLDINLNSEPFGQFEARTQLIDPNSEPVASLINDDEEMVANNEYRNFRIETDDEFEEFDFDDREHELPSNTFTQLDMDVIDSIHEHDPI
        MVHLYVNVSR+ LDINLNSEPF Q E RTQ+I P+SE VAS + DDEEMVANNEY +F+ E DDEFEEFDFD REHELP NT TQ+DMDVIDSI EHDPI
Subjt:  MVHLYVNVSRMSLDINLNSEPFGQFEARTQLIDPNSEPVASLINDDEEMVANNEYRNFRIETDDEFEEFDFDDREHELPSNTFTQLDMDVIDSIHEHDPI

Query:  VASI
        VA +
Subjt:  VASI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGGTTCATCTATATGTCAATGTGAGTAGGATGAGTTTGGATATAAACTTGAATTCTGAACCATTCGGTCAATTTGAAGCCCGAACTCAGCTTATTGACCCTAACTCTGA
ACCAGTTGCATCGCTGATAAACGACGACGAAGAAATGGTGGCTAATAATGAATATAGGAACTTTCGAATAGAAACGGACGATGAGTTTGAAGAGTTTGACTTTGACGATC
GTGAACATGAATTACCATCAAATACATTCACTCAATTAGATATGGATGTAATAGACAGTATTCATGAGCACGATCCAATTGTAGCCAGCATTTGGAGATATTATGACTCA
GGGGTTGGTCCATCGTCTTCATACATGGATGTTGGTCCATCAACTTCTTACATGCATGGATACGAACGCGACCGCAGAGAACAAAACGAATATCTATACTATGAAGCATC
TAAAGACGTATCAGATCCATAA

mRNA sequence

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Protein sequence

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MVHLYVNVSRMSLDINLNSEPFGQFEARTQLIDPNSEPVASLINDDEEMVANNEYRNFRIETDDEFEEFDFDDREHELPSNTFTQLDMDVIDSIHEHDPIVASIWRYYDS
GVGPSSSYMDVGPSTSYMHGYERDRREQNEYLYYEASKDVSDP

PI0013488 (gene) of Melon (PI 482460) v1 genome