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PI0013503 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013503
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionIleal sodium/bile acid cotransporter, putative
Genome locationchr09:8884457..8884913
RNA-Seq ExpressionPI0013503
SyntenyPI0013503
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050246.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa]1.2e-2350.34Show/hide
Query:  MSGVSSFIPTISQRNYGLSTTAI--------------SPQNLGKTILGLSFQAVLALFISSPTSSPPLLIHLFAAAVLISFAVSFGALFLNNSFPRTARF
        M+ + SFI  I++RN  +++  I              +  N+GKTILGL+FQAVLALFI+SP SSPPLL HLFAAAVLISFAVSF  +FL N FPR A  
Subjt:  MSGVSSFIPTISQRNYGLSTTAI--------------SPQNLGKTILGLSFQAVLALFISSPTSSPPLLIHLFAAAVLISFAVSFGALFLNNSFPRTARF

Query:  --------------IASFLLVHQNFAWICWVACAFSIIVFALSFK
                      I + LL+HQNFAWI W+A  FS++ F LSF+
Subjt:  --------------IASFLLVHQNFAWICWVACAFSIIVFALSFK

KAG6579136.1 hypothetical protein SDJN03_23584, partial [Cucurbita argyrosperma subsp. sororia]6.3e-2054.31Show/hide
Query:  GLSTTAISPQNLGKTILGLSFQAVLALFISSPTSSPPLLIHLFAAAVLISFAVSFGALFLNNSFPRTAR---------------FIASFLLVHQNFAWIC
        GL     +  NLGK + GL+FQAVLALFIS+PTS PPLLI+LFAAA+LIS A+S  ALFL  +FPR A                 +AS LL HQNF+WI 
Subjt:  GLSTTAISPQNLGKTILGLSFQAVLALFISSPTSSPPLLIHLFAAAVLISFAVSFGALFLNNSFPRTAR---------------FIASFLLVHQNFAWIC

Query:  WVACAFSIIVFALSFK
        W+AC F+++ F LSFK
Subjt:  WVACAFSIIVFALSFK

KAG6579139.1 hypothetical protein SDJN03_23587, partial [Cucurbita argyrosperma subsp. sororia]4.1e-1953.45Show/hide
Query:  GLSTTAISPQNLGKTILGLSFQAVLALFISSPTSSPPLLIHLFAAAVLISFAVSFGALFLNNSFPRTAR---------------FIASFLLVHQNFAWIC
        GL     +  NLGK + GL+FQAVLALFIS PTS PPL I+LFAAA+LIS A+S  ALFL  +FPR A                 +AS LL HQNF+WI 
Subjt:  GLSTTAISPQNLGKTILGLSFQAVLALFISSPTSSPPLLIHLFAAAVLISFAVSFGALFLNNSFPRTAR---------------FIASFLLVHQNFAWIC

Query:  WVACAFSIIVFALSFK
        W+AC F+ + F LSFK
Subjt:  WVACAFSIIVFALSFK

KGN49803.1 hypothetical protein Csa_004681 [Cucumis sativus]3.3e-2148.28Show/hide
Query:  MSGVSSFIPTISQRNYGLSTTAI--------------SPQNLGKTILGLSFQAVLALFISSPTSSPPLLIHLFAAAVLISFAVSFGALFLNNSFPRTARF
        M+ + S I +I++RN  ++   I              +  N+G TILGL+FQAVLALFI+S TSSPPLL HLF AAVLISFAVSF  +FL + FPR A  
Subjt:  MSGVSSFIPTISQRNYGLSTTAI--------------SPQNLGKTILGLSFQAVLALFISSPTSSPPLLIHLFAAAVLISFAVSFGALFLNNSFPRTARF

Query:  --------------IASFLLVHQNFAWICWVACAFSIIVFALSFK
                      I + LL+HQNFAWI W+AC FS++ F LSF+
Subjt:  --------------IASFLLVHQNFAWICWVACAFSIIVFALSFK

KGN49808.1 hypothetical protein Csa_004650 [Cucumis sativus]5.3e-3565.36Show/hide
Query:  MSGVSSFIPTISQRNYGL--------------------STTAISPQNLGKTILGLSFQAVLALFISS-PTSSPPLLIHLFAAAVLISFAVSFGALFLNNS
        MS  SSFI TISQRNYGL                      TA S Q LGK IL LSFQAVLALFISS PTS PPLLIH FAAAV ISFAVSF ALFL+NS
Subjt:  MSGVSSFIPTISQRNYGL--------------------STTAISPQNLGKTILGLSFQAVLALFISS-PTSSPPLLIHLFAAAVLISFAVSFGALFLNNS

Query:  FPRTAR---------------FIASFLLVHQNFAWICWVACAFSIIVFALSFK
        FPRTA                FIASFLLVHQNFAWICWVAC FSIIVFALSFK
Subjt:  FPRTAR---------------FIASFLLVHQNFAWICWVACAFSIIVFALSFK

TrEMBL top hitse value%identityAlignment
A0A0A0KJN8 Uncharacterized protein1.6e-2148.28Show/hide
Query:  MSGVSSFIPTISQRNYGLSTTAI--------------SPQNLGKTILGLSFQAVLALFISSPTSSPPLLIHLFAAAVLISFAVSFGALFLNNSFPRTARF
        M+ + S I +I++RN  ++   I              +  N+G TILGL+FQAVLALFI+S TSSPPLL HLF AAVLISFAVSF  +FL + FPR A  
Subjt:  MSGVSSFIPTISQRNYGLSTTAI--------------SPQNLGKTILGLSFQAVLALFISSPTSSPPLLIHLFAAAVLISFAVSFGALFLNNSFPRTARF

Query:  --------------IASFLLVHQNFAWICWVACAFSIIVFALSFK
                      I + LL+HQNFAWI W+AC FS++ F LSF+
Subjt:  --------------IASFLLVHQNFAWICWVACAFSIIVFALSFK

A0A0A0KJP2 Uncharacterized protein2.6e-3565.36Show/hide
Query:  MSGVSSFIPTISQRNYGL--------------------STTAISPQNLGKTILGLSFQAVLALFISS-PTSSPPLLIHLFAAAVLISFAVSFGALFLNNS
        MS  SSFI TISQRNYGL                      TA S Q LGK IL LSFQAVLALFISS PTS PPLLIH FAAAV ISFAVSF ALFL+NS
Subjt:  MSGVSSFIPTISQRNYGL--------------------STTAISPQNLGKTILGLSFQAVLALFISS-PTSSPPLLIHLFAAAVLISFAVSFGALFLNNS

Query:  FPRTAR---------------FIASFLLVHQNFAWICWVACAFSIIVFALSFK
        FPRTA                FIASFLLVHQNFAWICWVAC FSIIVFALSFK
Subjt:  FPRTAR---------------FIASFLLVHQNFAWICWVACAFSIIVFALSFK

A0A5A7U7U1 Putative Ileal sodium/bile acid cotransporter5.9e-2450.34Show/hide
Query:  MSGVSSFIPTISQRNYGLSTTAI--------------SPQNLGKTILGLSFQAVLALFISSPTSSPPLLIHLFAAAVLISFAVSFGALFLNNSFPRTARF
        M+ + SFI  I++RN  +++  I              +  N+GKTILGL+FQAVLALFI+SP SSPPLL HLFAAAVLISFAVSF  +FL N FPR A  
Subjt:  MSGVSSFIPTISQRNYGLSTTAI--------------SPQNLGKTILGLSFQAVLALFISSPTSSPPLLIHLFAAAVLISFAVSFGALFLNNSFPRTARF

Query:  --------------IASFLLVHQNFAWICWVACAFSIIVFALSFK
                      I + LL+HQNFAWI W+A  FS++ F LSF+
Subjt:  --------------IASFLLVHQNFAWICWVACAFSIIVFALSFK

A0A6J1CY58 uncharacterized protein LOC1110156581.4e-1250Show/hide
Query:  MSGVSSFIPTISQRNYGLST------------------------TAISPQNLGKTILGLSFQAVLALFISSPTSSPPLLIHLFAAAVLISFAVSFGALFL
        M+ +SSFI  I++RN G+S+                         A S Q+LGKTILGL+FQAVLALFIS P+S P L   LF AAVLISFAVSF  LFL
Subjt:  MSGVSSFIPTISQRNYGLST------------------------TAISPQNLGKTILGLSFQAVLALFISSPTSSPPLLIHLFAAAVLISFAVSFGALFL

Query:  NNSFPRTA
          ++PR A
Subjt:  NNSFPRTA

A0A6P5SLK8 uncharacterized protein LOC1107577028.3e-1035.96Show/hide
Query:  SPQNLGKTILGLSFQAVLALFISSPTSSPP--------LLIHLFAAAVLISFAVSFGALFLNNSFPRTARFIASF--------------LLVHQNFAWIC
        +P +LGKT+LGL+FQA++ L ++S    P         L +H+   A++I+FA  F A+FL  ++PR A  I +F              + +   F WIC
Subjt:  SPQNLGKTILGLSFQAVLALFISSPTSSPP--------LLIHLFAAAVLISFAVSFGALFLNNSFPRTARFIASF--------------LLVHQNFAWIC

Query:  WVACAFSIIVFALS
        W+ACAFS++ F L+
Subjt:  WVACAFSIIVFALS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGGAGTTTCTTCCTTTATCCCAACAATCAGCCAAAGAAACTATGGACTCAGCACAACAGCCATTAGCCCTCAAAATCTCGGCAAGACAATTCTTGGGCTTAGTTT
TCAAGCAGTTTTAGCCTTGTTCATTAGCTCACCAACTTCCTCTCCTCCACTTTTGATACACCTTTTTGCTGCTGCTGTTTTGATTAGCTTTGCTGTTTCATTTGGTGCTC
TTTTCCTGAATAACTCCTTCCCGAGAACCGCCCGTTTCATAGCAAGCTTTCTTCTAGTTCATCAGAACTTTGCTTGGATTTGTTGGGTGGCATGTGCCTTCTCCATCATT
GTCTTTGCTCTATCATTTAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGGAGTTTCTTCCTTTATCCCAACAATCAGCCAAAGAAACTATGGACTCAGCACAACAGCCATTAGCCCTCAAAATCTCGGCAAGACAATTCTTGGGCTTAGTTT
TCAAGCAGTTTTAGCCTTGTTCATTAGCTCACCAACTTCCTCTCCTCCACTTTTGATACACCTTTTTGCTGCTGCTGTTTTGATTAGCTTTGCTGTTTCATTTGGTGCTC
TTTTCCTGAATAACTCCTTCCCGAGAACCGCCCGTTTCATAGCAAGCTTTCTTCTAGTTCATCAGAACTTTGCTTGGATTTGTTGGGTGGCATGTGCCTTCTCCATCATT
GTCTTTGCTCTATCATTTAAGTGA
Protein sequenceShow/hide protein sequence
MSGVSSFIPTISQRNYGLSTTAISPQNLGKTILGLSFQAVLALFISSPTSSPPLLIHLFAAAVLISFAVSFGALFLNNSFPRTARFIASFLLVHQNFAWICWVACAFSII
VFALSFK