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PI0013513 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013513
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr10:2797456..2799504
RNA-Seq ExpressionPI0013513
SyntenyPI0013513
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0016757 - transferase activity, transferring glycosyl groups (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025377.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.1e-1582.35Show/hide
Query:  PFEVAKSIWEELSKPPKGGIIIKENPVINEHGSSSECSSEEMPHPNIMSVM
        PFEVAK+IWE++SKPPKGGI+IKENP I+EH SSS+ SSEEMPHPNIMSVM
Subjt:  PFEVAKSIWEELSKPPKGGIIIKENPVINEHGSSSECSSEEMPHPNIMSVM

KAA0056617.1 glycosyltransferase family 92 protein [Cucumis melo var. makuwa]1.8e-1579.25Show/hide
Query:  PFEVAKSIWEELSKPPKGGIIIKENPVINEHGSSSECSSEEMPHPNIMSVMGL
        PFEV K+IWE++SKPPKGGI+IKENP I+EH S SE SSEEMPHPNIMSVMG+
Subjt:  PFEVAKSIWEELSKPPKGGIIIKENPVINEHGSSSECSSEEMPHPNIMSVMGL

TYK03695.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.4e-1575.47Show/hide
Query:  MSPFEVAKSIWEELSKPPKGGIIIKENPVINEHGSSSECSSEEMPHPNIMSVM
        M PFEVAK+IWE++SKPPKGGI+IKENP ++EH S SECS+EE+P PNIMSVM
Subjt:  MSPFEVAKSIWEELSKPPKGGIIIKENPVINEHGSSSECSSEEMPHPNIMSVM

TYK09793.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.1e-1582.35Show/hide
Query:  PFEVAKSIWEELSKPPKGGIIIKENPVINEHGSSSECSSEEMPHPNIMSVM
        PFEVAK+IWE++SKPPKGGI+IKENP I+EH SSS+ SSEEMPHPNIMSVM
Subjt:  PFEVAKSIWEELSKPPKGGIIIKENPVINEHGSSSECSSEEMPHPNIMSVM

TYK29782.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.4e-1575.47Show/hide
Query:  MSPFEVAKSIWEELSKPPKGGIIIKENPVINEHGSSSECSSEEMPHPNIMSVM
        M PFEVAK+IWE++SKPPKGGI+IKENP ++EH S SECS+EE+P PNIMSVM
Subjt:  MSPFEVAKSIWEELSKPPKGGIIIKENPVINEHGSSSECSSEEMPHPNIMSVM

TrEMBL top hitse value%identityAlignment
A0A5A7SKY7 Ty3-gypsy retrotransposon protein1.5e-1582.35Show/hide
Query:  PFEVAKSIWEELSKPPKGGIIIKENPVINEHGSSSECSSEEMPHPNIMSVM
        PFEVAK+IWE++SKPPKGGI+IKENP I+EH SSS+ SSEEMPHPNIMSVM
Subjt:  PFEVAKSIWEELSKPPKGGIIIKENPVINEHGSSSECSSEEMPHPNIMSVM

A0A5D3BX77 Retrotransposon gag protein1.1e-1575.47Show/hide
Query:  MSPFEVAKSIWEELSKPPKGGIIIKENPVINEHGSSSECSSEEMPHPNIMSVM
        M PFEVAK+IWE++SKPPKGGI+IKENP ++EH S SECS+EE+P PNIMSVM
Subjt:  MSPFEVAKSIWEELSKPPKGGIIIKENPVINEHGSSSECSSEEMPHPNIMSVM

A0A5D3CD55 Ty3-gypsy retrotransposon protein1.5e-1582.35Show/hide
Query:  PFEVAKSIWEELSKPPKGGIIIKENPVINEHGSSSECSSEEMPHPNIMSVM
        PFEVAK+IWE++SKPPKGGI+IKENP I+EH SSS+ SSEEMPHPNIMSVM
Subjt:  PFEVAKSIWEELSKPPKGGIIIKENPVINEHGSSSECSSEEMPHPNIMSVM

A0A5D3DL10 Glycosyltransferase family 92 protein8.8e-1679.25Show/hide
Query:  PFEVAKSIWEELSKPPKGGIIIKENPVINEHGSSSECSSEEMPHPNIMSVMGL
        PFEV K+IWE++SKPPKGGI+IKENP I+EH S SE SSEEMPHPNIMSVMG+
Subjt:  PFEVAKSIWEELSKPPKGGIIIKENPVINEHGSSSECSSEEMPHPNIMSVMGL

A0A5D3E1L5 Ty3-gypsy retrotransposon protein1.1e-1575.47Show/hide
Query:  MSPFEVAKSIWEELSKPPKGGIIIKENPVINEHGSSSECSSEEMPHPNIMSVM
        M PFEVAK+IWE++SKPPKGGI+IKENP ++EH S SECS+EE+P PNIMSVM
Subjt:  MSPFEVAKSIWEELSKPPKGGIIIKENPVINEHGSSSECSSEEMPHPNIMSVM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACCCTTTGAGGTCGCAAAGAGTATCTGGGAAGAGTTGTCAAAACCACCAAAAGGTGGAATTATAATAAAGGAAAATCCTGTGATTAATGAGCACGGTTCGTCTTC
TGAATGCTCAAGTGAGGAGATGCCTCACCCAAATATAATGTCGGTTATGGGACTGATGTCGATACAAGTGAAGATAGAATGGCAGAGCTTGAAAAGAAGGATTTCTGAGG
CAAATAAGAGATGTCCACAAGAGGAAGCTTCAGACGAGGAGCTAGGCGAGCAACCAGGCGATCGTGAATACATGGCTATGCGAACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCACCCTTTGAGGTCGCAAAGAGTATCTGGGAAGAGTTGTCAAAACCACCAAAAGGTGGAATTATAATAAAGGAAAATCCTGTGATTAATGAGCACGGTTCGTCTTC
TGAATGCTCAAGTGAGGAGATGCCTCACCCAAATATAATGTCGGTTATGGGACTGATGTCGATACAAGTGAAGATAGAATGGCAGAGCTTGAAAAGAAGGATTTCTGAGG
CAAATAAGAGATGTCCACAAGAGGAAGCTTCAGACGAGGAGCTAGGCGAGCAACCAGGCGATCGTGAATACATGGCTATGCGAACCTGA
Protein sequenceShow/hide protein sequence
MSPFEVAKSIWEELSKPPKGGIIIKENPVINEHGSSSECSSEEMPHPNIMSVMGLMSIQVKIEWQSLKRRISEANKRCPQEEASDEELGEQPGDREYMAMRT