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PI0013614 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013614
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr08:10165513..10166022
RNA-Seq ExpressionPI0013614
SyntenyPI0013614
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038053.1 uncharacterized protein E6C27_scaffold36G002560 [Cucumis melo var. makuwa]1.3e-1054.12Show/hide
Query:  KFPS-DESCSAIESLGWDYCEEEA-STLLSLEEFFED---LHEIESVNAVSSERKSEPLSMSTRGEERIKPSTEEPPKLKLKPLP
        +FP+ DE+ SAIESL WDYCEEE    L + EEFFE+    + ++ VN VS ER  E L + T+G+++ KPS EEPPKL+LK LP
Subjt:  KFPS-DESCSAIESLGWDYCEEEA-STLLSLEEFFED---LHEIESVNAVSSERKSEPLSMSTRGEERIKPSTEEPPKLKLKPLP

KAA0040570.1 uncharacterized protein E6C27_scaffold262G001400 [Cucumis melo var. makuwa]5.9e-1154.76Show/hide
Query:  FPSD-ESCSAIESLGWDYCEEEA-STLLSLEEFFED---LHEIESVNAVSSERKSEPLSMSTRGEERIKPSTEEPPKLKLKPLP
        FP D ESC+AIE LGWDYCEEEA   L S +EF E+    + ++ VN VS + K E L + T+GE + + S EEPPKL+LKPLP
Subjt:  FPSD-ESCSAIESLGWDYCEEEA-STLLSLEEFFED---LHEIESVNAVSSERKSEPLSMSTRGEERIKPSTEEPPKLKLKPLP

KAA0040851.1 hypothetical protein E6C27_scaffold333G00760 [Cucumis melo var. makuwa]1.5e-1152.75Show/hide
Query:  FNVANAMKFPSD-ESCSAIESLGWDYCEEEA-STLLSLEEFFED---LHEIESVNAVSSERKSEPLSMSTRGEERIKPSTEEPPKLKLKPL
        FN+ N MKF +D ++   IESLGWDY EEE  + L SL+EFFE+    + +E V+ VSS RK EP  M T+G+++ K S EEPP+L+LKPL
Subjt:  FNVANAMKFPSD-ESCSAIESLGWDYCEEEA-STLLSLEEFFED---LHEIESVNAVSSERKSEPLSMSTRGEERIKPSTEEPPKLKLKPL

KAA0054122.1 uncharacterized protein E6C27_scaffold131G00340 [Cucumis melo var. makuwa]3.4e-1150Show/hide
Query:  FNVANAMKFP-SDESCSAIESLGWDYCEEEA-STLLSLEEFFED---LHEIESVNAVSSERKSEPLSMSTRGEERIKPSTEEPPKLKLKPLP
        FN   +MKFP +D   +AIESLGWDYC+EE    L S EEFFE+    + +E VN +  + K E L + T+G+++IK S EEPP+++LKPLP
Subjt:  FNVANAMKFP-SDESCSAIESLGWDYCEEEA-STLLSLEEFFED---LHEIESVNAVSSERKSEPLSMSTRGEERIKPSTEEPPKLKLKPLP

TYK25882.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]3.8e-1055.81Show/hide
Query:  MKFPSD-ESCSAIESLGWDYCEEEASTLLSL-EEFF--EDLHEIE-SVNAVSSERKSEPLSMSTRGEERIKPSTEEPPKLKLKPLP
        MKFPS+ E+C+AI+SLGWDYCEEE  T L + EEFF  ED + I+  VN VS  RK E     T+G  + K S EE P+L+LKPLP
Subjt:  MKFPSD-ESCSAIESLGWDYCEEEASTLLSL-EEFF--EDLHEIE-SVNAVSSERKSEPLSMSTRGEERIKPSTEEPPKLKLKPLP

TrEMBL top hitse value%identityAlignment
A0A5A7T4Y2 Uncharacterized protein6.3e-1154.12Show/hide
Query:  KFPS-DESCSAIESLGWDYCEEEA-STLLSLEEFFED---LHEIESVNAVSSERKSEPLSMSTRGEERIKPSTEEPPKLKLKPLP
        +FP+ DE+ SAIESL WDYCEEE    L + EEFFE+    + ++ VN VS ER  E L + T+G+++ KPS EEPPKL+LK LP
Subjt:  KFPS-DESCSAIESLGWDYCEEEA-STLLSLEEFFED---LHEIESVNAVSSERKSEPLSMSTRGEERIKPSTEEPPKLKLKPLP

A0A5A7TGQ9 Uncharacterized protein7.5e-1252.75Show/hide
Query:  FNVANAMKFPSD-ESCSAIESLGWDYCEEEA-STLLSLEEFFED---LHEIESVNAVSSERKSEPLSMSTRGEERIKPSTEEPPKLKLKPL
        FN+ N MKF +D ++   IESLGWDY EEE  + L SL+EFFE+    + +E V+ VSS RK EP  M T+G+++ K S EEPP+L+LKPL
Subjt:  FNVANAMKFPSD-ESCSAIESLGWDYCEEEA-STLLSLEEFFED---LHEIESVNAVSSERKSEPLSMSTRGEERIKPSTEEPPKLKLKPL

A0A5A7UE99 Uncharacterized protein1.7e-1150Show/hide
Query:  FNVANAMKFP-SDESCSAIESLGWDYCEEEA-STLLSLEEFFED---LHEIESVNAVSSERKSEPLSMSTRGEERIKPSTEEPPKLKLKPLP
        FN   +MKFP +D   +AIESLGWDYC+EE    L S EEFFE+    + +E VN +  + K E L + T+G+++IK S EEPP+++LKPLP
Subjt:  FNVANAMKFP-SDESCSAIESLGWDYCEEEA-STLLSLEEFFED---LHEIESVNAVSSERKSEPLSMSTRGEERIKPSTEEPPKLKLKPLP

A0A5D3C0Z2 Integrase_H2C2 domain-containing protein2.8e-1154.76Show/hide
Query:  FPSD-ESCSAIESLGWDYCEEEA-STLLSLEEFFED---LHEIESVNAVSSERKSEPLSMSTRGEERIKPSTEEPPKLKLKPLP
        FP D ESC+AIE LGWDYCEEEA   L S +EF E+    + ++ VN VS + K E L + T+GE + + S EEPPKL+LKPLP
Subjt:  FPSD-ESCSAIESLGWDYCEEEA-STLLSLEEFFED---LHEIESVNAVSSERKSEPLSMSTRGEERIKPSTEEPPKLKLKPLP

A0A5D3DQS7 Transposon Ty3-G Gag-Pol polyprotein1.8e-1055.81Show/hide
Query:  MKFPSD-ESCSAIESLGWDYCEEEASTLLSL-EEFF--EDLHEIE-SVNAVSSERKSEPLSMSTRGEERIKPSTEEPPKLKLKPLP
        MKFPS+ E+C+AI+SLGWDYCEEE  T L + EEFF  ED + I+  VN VS  RK E     T+G  + K S EE P+L+LKPLP
Subjt:  MKFPSD-ESCSAIESLGWDYCEEEASTLLSL-EEFF--EDLHEIE-SVNAVSSERKSEPLSMSTRGEERIKPSTEEPPKLKLKPLP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCAATGTTGCAAACGCAATGAAATTCCCTTCTGATGAAAGTTGCAGTGCAATAGAATCCTTGGGATGGGATTATTGCGAGGAAGAAGCTTCTACATTGCTCAGCCT
TGAAGAATTCTTTGAAGATCTCCATGAAATAGAAAGCGTAAACGCTGTGTCTAGCGAAAGGAAATCAGAACCTTTGAGTATGTCAACCCGAGGCGAGGAGAGGATTAAGC
CATCTACTGAGGAACCACCAAAATTAAAGCTAAAGCCACTACCAACCCGAGGCCTTCACTCTGTTCGCAAGCTATCTATTCGACTTTTCGAGCGTCTCCTCCGCGCCGTC
TGCCCAGTCCTCTTCGTCCAGTCATTCCTCATCCCAAGTTCGTCTGAGCTTCATCGTTACTCCTTTTCCAGCCCGTCGAACCTCCCTCCTAGGCTTCAAGCCATTTTTTG
GTACATTTCGTTTTGGGACTTAAGCTATTTAGAGTTCAAATGTCAGATTCTGATTGGAGTGAAGTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCAATGTTGCAAACGCAATGAAATTCCCTTCTGATGAAAGTTGCAGTGCAATAGAATCCTTGGGATGGGATTATTGCGAGGAAGAAGCTTCTACATTGCTCAGCCT
TGAAGAATTCTTTGAAGATCTCCATGAAATAGAAAGCGTAAACGCTGTGTCTAGCGAAAGGAAATCAGAACCTTTGAGTATGTCAACCCGAGGCGAGGAGAGGATTAAGC
CATCTACTGAGGAACCACCAAAATTAAAGCTAAAGCCACTACCAACCCGAGGCCTTCACTCTGTTCGCAAGCTATCTATTCGACTTTTCGAGCGTCTCCTCCGCGCCGTC
TGCCCAGTCCTCTTCGTCCAGTCATTCCTCATCCCAAGTTCGTCTGAGCTTCATCGTTACTCCTTTTCCAGCCCGTCGAACCTCCCTCCTAGGCTTCAAGCCATTTTTTG
GTACATTTCGTTTTGGGACTTAAGCTATTTAGAGTTCAAATGTCAGATTCTGATTGGAGTGAAGTTTTGA
Protein sequenceShow/hide protein sequence
MFNVANAMKFPSDESCSAIESLGWDYCEEEASTLLSLEEFFEDLHEIESVNAVSSERKSEPLSMSTRGEERIKPSTEEPPKLKLKPLPTRGLHSVRKLSIRLFERLLRAV
CPVLFVQSFLIPSSSELHRYSFSSPSNLPPRLQAIFWYISFWDLSYLEFKCQILIGVKF