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PI0013631 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013631
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr05:14862957..14863379
RNA-Seq ExpressionPI0013631
SyntenyPI0013631
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054434.1 hypothetical protein E6C27_scaffold24G001880 [Cucumis melo var. makuwa]1.5e-0438.14Show/hide
Query:  QRFAKRTAGPSTNNAQISTAISNLSTSVFHLTSLVMAQAEMMRQIAVRHDRQFRTQMEYTYAAVVQRVPAPIILPDLEAPFPPLTR-PGDPAPRQNN
        +R AK T  P     ++   +   S S    +  VM +         R DR+F+  MEYT+A  VQRVP P+I  +LE PFPP+ + PG P PRQ +
Subjt:  QRFAKRTAGPSTNNAQISTAISNLSTSVFHLTSLVMAQAEMMRQIAVRHDRQFRTQMEYTYAAVVQRVPAPIILPDLEAPFPPLTR-PGDPAPRQNN

KAA0064129.1 uncharacterized protein E6C27_scaffold548G00430 [Cucumis melo var. makuwa]7.5e-0430.28Show/hide
Query:  EHFEQILANQGDQATQLHNLQNKVDQLQRPNAKNSDTRFSRRHQRFAKRTAGPSTNNAQISTAISNLSTSVFHLTSLVMAQAEMMRQIAVRHDRQFRTQM
        ++FEQ+L  Q   + +   +   ++++Q  N+K       ++     K+ A    N  Q+S+ +SN       LT +V+   EM  ++ V+ D+QF+  +
Subjt:  EHFEQILANQGDQATQLHNLQNKVDQLQRPNAKNSDTRFSRRHQRFAKRTAGPSTNNAQISTAISNLSTSVFHLTSLVMAQAEMMRQIAVRHDRQFRTQM

Query:  EYTYAAVVQRVPAPIILPDLEAPFPPLTRP---GDPAPRQNN
        EYT+A   QR+P+P I P++E+ + PL +P   G P P Q+N
Subjt:  EYTYAAVVQRVPAPIILPDLEAPFPPLTRP---GDPAPRQNN

TYK11975.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa]9.8e-0456.14Show/hide
Query:  MRQIAVRHDRQFRTQMEYTYAAVVQRVPAPIILPDLEAPFPP--LTRPG----DPAP
        +  IA RHDRQF TQMEYT+A  VQ V  P+I+P+L AP PP  LT P     DP P
Subjt:  MRQIAVRHDRQFRTQMEYTYAAVVQRVPAPIILPDLEAPFPP--LTRPG----DPAP

TYK14602.1 hypothetical protein E5676_scaffold552G001110 [Cucumis melo var. makuwa]4.0e-0551.72Show/hide
Query:  EMMRQIAVRHDRQFRTQMEYTYAAVVQRVPAPIILPDLEAPFPPLTR-PGDPAPRQNN
        EM  ++  R DR+F+  MEYT+A  VQRVP P+I  +LE PFPP+ + PG P PRQ +
Subjt:  EMMRQIAVRHDRQFRTQMEYTYAAVVQRVPAPIILPDLEAPFPPLTR-PGDPAPRQNN

TYK28611.1 hypothetical protein E5676_scaffold2030G00280 [Cucumis melo var. makuwa]7.5e-0430.28Show/hide
Query:  EHFEQILANQGDQATQLHNLQNKVDQLQRPNAKNSDTRFSRRHQRFAKRTAGPSTNNAQISTAISNLSTSVFHLTSLVMAQAEMMRQIAVRHDRQFRTQM
        ++FEQ+L  Q   + +   +   ++++Q  N+K       ++     K+ A    N  Q+S+ +SN       LT +V+   EM  ++ V+ D+QF+  +
Subjt:  EHFEQILANQGDQATQLHNLQNKVDQLQRPNAKNSDTRFSRRHQRFAKRTAGPSTNNAQISTAISNLSTSVFHLTSLVMAQAEMMRQIAVRHDRQFRTQM

Query:  EYTYAAVVQRVPAPIILPDLEAPFPPLTRP---GDPAPRQNN
        EYT+A   QR+P+P I P++E+ + PL +P   G P P Q+N
Subjt:  EYTYAAVVQRVPAPIILPDLEAPFPPLTRP---GDPAPRQNN

TrEMBL top hitse value%identityAlignment
A0A5A7UH00 Uncharacterized protein7.3e-0538.14Show/hide
Query:  QRFAKRTAGPSTNNAQISTAISNLSTSVFHLTSLVMAQAEMMRQIAVRHDRQFRTQMEYTYAAVVQRVPAPIILPDLEAPFPPLTR-PGDPAPRQNN
        +R AK T  P     ++   +   S S    +  VM +         R DR+F+  MEYT+A  VQRVP P+I  +LE PFPP+ + PG P PRQ +
Subjt:  QRFAKRTAGPSTNNAQISTAISNLSTSVFHLTSLVMAQAEMMRQIAVRHDRQFRTQMEYTYAAVVQRVPAPIILPDLEAPFPPLTR-PGDPAPRQNN

A0A5A7VF20 Uncharacterized protein3.6e-0430.28Show/hide
Query:  EHFEQILANQGDQATQLHNLQNKVDQLQRPNAKNSDTRFSRRHQRFAKRTAGPSTNNAQISTAISNLSTSVFHLTSLVMAQAEMMRQIAVRHDRQFRTQM
        ++FEQ+L  Q   + +   +   ++++Q  N+K       ++     K+ A    N  Q+S+ +SN       LT +V+   EM  ++ V+ D+QF+  +
Subjt:  EHFEQILANQGDQATQLHNLQNKVDQLQRPNAKNSDTRFSRRHQRFAKRTAGPSTNNAQISTAISNLSTSVFHLTSLVMAQAEMMRQIAVRHDRQFRTQM

Query:  EYTYAAVVQRVPAPIILPDLEAPFPPLTRP---GDPAPRQNN
        EYT+A   QR+P+P I P++E+ + PL +P   G P P Q+N
Subjt:  EYTYAAVVQRVPAPIILPDLEAPFPPLTRP---GDPAPRQNN

A0A5D3CKB6 Retrovirus-related Pol polyprotein from transposon 17.64.8e-0456.14Show/hide
Query:  MRQIAVRHDRQFRTQMEYTYAAVVQRVPAPIILPDLEAPFPP--LTRPG----DPAP
        +  IA RHDRQF TQMEYT+A  VQ V  P+I+P+L AP PP  LT P     DP P
Subjt:  MRQIAVRHDRQFRTQMEYTYAAVVQRVPAPIILPDLEAPFPP--LTRPG----DPAP

A0A5D3CT45 Uncharacterized protein1.9e-0551.72Show/hide
Query:  EMMRQIAVRHDRQFRTQMEYTYAAVVQRVPAPIILPDLEAPFPPLTR-PGDPAPRQNN
        EM  ++  R DR+F+  MEYT+A  VQRVP P+I  +LE PFPP+ + PG P PRQ +
Subjt:  EMMRQIAVRHDRQFRTQMEYTYAAVVQRVPAPIILPDLEAPFPPLTR-PGDPAPRQNN

A0A5D3DYE2 Uncharacterized protein3.6e-0430.28Show/hide
Query:  EHFEQILANQGDQATQLHNLQNKVDQLQRPNAKNSDTRFSRRHQRFAKRTAGPSTNNAQISTAISNLSTSVFHLTSLVMAQAEMMRQIAVRHDRQFRTQM
        ++FEQ+L  Q   + +   +   ++++Q  N+K       ++     K+ A    N  Q+S+ +SN       LT +V+   EM  ++ V+ D+QF+  +
Subjt:  EHFEQILANQGDQATQLHNLQNKVDQLQRPNAKNSDTRFSRRHQRFAKRTAGPSTNNAQISTAISNLSTSVFHLTSLVMAQAEMMRQIAVRHDRQFRTQM

Query:  EYTYAAVVQRVPAPIILPDLEAPFPPLTRP---GDPAPRQNN
        EYT+A   QR+P+P I P++E+ + PL +P   G P P Q+N
Subjt:  EYTYAAVVQRVPAPIILPDLEAPFPPLTRP---GDPAPRQNN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACACTTTGAACAAATTTTGGCTAACCAAGGGGACCAGGCGACGCAACTCCACAACCTGCAAAATAAAGTTGATCAGTTGCAACGTCCCAACGCCAAAAACTCTGA
CACCCGCTTCTCAAGACGACATCAACGTTTTGCGAAAAGAACTGCGGGACCTTCGACGAACAACGCCCAGATCTCCACCGCCATATCCAACCTCTCCACTTCCGTCTTCC
ACCTCACTTCCCTGGTCATGGCCCAAGCTGAAATGATGCGGCAAATAGCAGTACGGCATGATAGGCAGTTTCGCACGCAAATGGAATACACGTATGCAGCTGTTGTTCAA
CGCGTGCCTGCCCCAATCATACTGCCAGATCTTGAAGCACCCTTCCCACCACTCACGCGTCCTGGCGATCCTGCTCCCCGCCAAAACAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAACACTTTGAACAAATTTTGGCTAACCAAGGGGACCAGGCGACGCAACTCCACAACCTGCAAAATAAAGTTGATCAGTTGCAACGTCCCAACGCCAAAAACTCTGA
CACCCGCTTCTCAAGACGACATCAACGTTTTGCGAAAAGAACTGCGGGACCTTCGACGAACAACGCCCAGATCTCCACCGCCATATCCAACCTCTCCACTTCCGTCTTCC
ACCTCACTTCCCTGGTCATGGCCCAAGCTGAAATGATGCGGCAAATAGCAGTACGGCATGATAGGCAGTTTCGCACGCAAATGGAATACACGTATGCAGCTGTTGTTCAA
CGCGTGCCTGCCCCAATCATACTGCCAGATCTTGAAGCACCCTTCCCACCACTCACGCGTCCTGGCGATCCTGCTCCCCGCCAAAACAACTAA
Protein sequenceShow/hide protein sequence
MEHFEQILANQGDQATQLHNLQNKVDQLQRPNAKNSDTRFSRRHQRFAKRTAGPSTNNAQISTAISNLSTSVFHLTSLVMAQAEMMRQIAVRHDRQFRTQMEYTYAAVVQ
RVPAPIILPDLEAPFPPLTRPGDPAPRQNN