; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0013681 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013681
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionSerine/arginine repetitive matrix protein 1-like
Genome locationchr11:5397291..5397983
RNA-Seq ExpressionPI0013681
SyntenyPI0013681
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR007592 - GLABROUS1 enhancer-binding protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037301.1 serine/arginine repetitive matrix protein 1-like [Cucumis melo var. makuwa]1.1e-10892.44Show/hide
Query:  MSTPHRSLPSNASTE----TLTLTQSNNQNDQLHFTDEDELNLLNSYLQISRSENPTKNSLPTLDSPALDRLQTAVGPKFSHSVIADKLHRLKLLYHKFA
        MSTPHRSLPSNAS E    TLTLTQ NNQ DQLHFTDEDE+NLL SYLQISRSENPTKNSLPTLDSPA DRLQTAVGPKFSHSVIADKLHRLKLLYHKFA
Subjt:  MSTPHRSLPSNASTE----TLTLTQSNNQNDQLHFTDEDELNLLNSYLQISRSENPTKNSLPTLDSPALDRLQTAVGPKFSHSVIADKLHRLKLLYHKFA

Query:  RTKSFIKTPHHRQILDLGRSIWGKSPTPITRKPQVISPSRILSRRIKQRSITRKAGVGVDVDLKNFPVLVAEFSRQFPRNGVWREGLRRMEEKNLKDMNE
        RTKSFIKTPH RQILDLGRSIWGKSPTPITRKPQVISPSRILSRRIKQRS TRK GVGVD+DLKNFPVLVAEFS+QFP NGVWREGLRRMEEKNLKDMNE
Subjt:  RTKSFIKTPHHRQILDLGRSIWGKSPTPITRKPQVISPSRILSRRIKQRSITRKAGVGVDVDLKNFPVLVAEFSRQFPRNGVWREGLRRMEEKNLKDMNE

Query:  KWVLLHIEGAELKARRAALLKQQLR
        KWVLLHIEGAELKARRAALLKQQL+
Subjt:  KWVLLHIEGAELKARRAALLKQQLR

KAE8637412.1 hypothetical protein CSA_023389, partial [Cucumis sativus]3.8e-2982.14Show/hide
Query:  RSITRKAGVGVDVDLKNFPVLVAEFSRQFPRNGVWREGLRRMEEKNLKDMNEKWVLLHIEGAELKARRAALLKQQLRITETNED
        R + +  GV VDVDLKNFPVL+AE SRQF  NGVWR+GLRRMEEKNLKDMNEKWVLLHIEGAELKAR+ ALLKQQLR TETNED
Subjt:  RSITRKAGVGVDVDLKNFPVLVAEFSRQFPRNGVWREGLRRMEEKNLKDMNEKWVLLHIEGAELKARRAALLKQQLRITETNED

KAG6570827.1 hypothetical protein SDJN03_29742, partial [Cucurbita argyrosperma subsp. sororia]2.5e-7369.2Show/hide
Query:  MSTPHRSLPSNASTETLTLTQSNNQNDQLHFTDEDELNLLNSYLQISRSENPTKNSLPTLDSPALDRLQTAVGPKFSHSVIADKLHRLKLLYHKFARTKS
        MSTPHR  PSNAS ETLT           HF++EDELNLLN YLQI+RS NPT NS PTLDSPALDR++TA+ PKF++S IADKLHRLKL YHK ARTKS
Subjt:  MSTPHRSLPSNASTETLTLTQSNNQNDQLHFTDEDELNLLNSYLQISRSENPTKNSLPTLDSPALDRLQTAVGPKFSHSVIADKLHRLKLLYHKFARTKS

Query:  FIKTPHHRQILDLGRSIWGKSPTPITRKPQVISPSRILSRRIKQRSITRKAGVGVDVDLKNFPVLVAEFSRQFPRNGVWREGLRRMEEKNLKDMNEKWVL
         IKTPHHR+IL++GRSIWGK PT  T KPQ I   R + RRIKQRS + K G    VDL +FPVL++EFSR+FP NGVW+EGLR MEEK+L+DMNEKWVL
Subjt:  FIKTPHHRQILDLGRSIWGKSPTPITRKPQVISPSRILSRRIKQRSITRKAGVGVDVDLKNFPVLVAEFSRQFPRNGVWREGLRRMEEKNLKDMNEKWVL

Query:  LHIEGAELKARRAALLKQQLRITE
        LHIE AELKARRAALL++QLR+ +
Subjt:  LHIEGAELKARRAALLKQQLRITE

KAG6606028.1 hypothetical protein SDJN03_03345, partial [Cucurbita argyrosperma subsp. sororia]6.0e-6765.09Show/hide
Query:  MSTPHRSLPS---NASTETL--TLTQSNNQNDQLHFTDEDELNLLNSYLQISRSENPTKNSLPTLDSPALDRLQTAVGPKFSHSVIADKLHRLKLLYHKF
        MSTP RS PS    AS++     LTQS     Q+HFTDEDEL+LLN YL+++ S    KNS PTLDSPALDR+ TA+G KF HS IADKLHRLK+ YHKF
Subjt:  MSTPHRSLPS---NASTETL--TLTQSNNQNDQLHFTDEDELNLLNSYLQISRSENPTKNSLPTLDSPALDRLQTAVGPKFSHSVIADKLHRLKLLYHKF

Query:  ARTKSFIKTPHHRQILDLGRSIWGKSPTPITRKPQVISPSRILSRRIKQRSITRKAGVGVDVDLKNFPVLVAEFSRQFPRNGVWREGLRRMEEKNLKDMN
        ARTKSFIKTPHH +IL++GRSIWGK   P T KPQVI      SRRI+ RS+ +K G    VDLKNFPVLV+EFSRQFP NGVWREGL+ MEE +LK MN
Subjt:  ARTKSFIKTPHHRQILDLGRSIWGKSPTPITRKPQVISPSRILSRRIKQRSITRKAGVGVDVDLKNFPVLVAEFSRQFPRNGVWREGLRRMEEKNLKDMN

Query:  EKWVLLHIEGAELKARRAALLKQQLRITETNE
        EKWVLLHIE AELKARR AL+++Q+  T+T +
Subjt:  EKWVLLHIEGAELKARRAALLKQQLRITETNE

KGN46890.1 hypothetical protein Csa_020607 [Cucumis sativus]1.7e-10991.3Show/hide
Query:  MSTPHRSLPSNASTETLTLTQSNNQNDQLHFTDEDELNLLNSYLQISRSENPTKNSLPTLDSPALDRLQTAVGPKFSHSVIADKLHRLKLLYHKFARTKS
        MST HRS PS+AS E  TLTQSNNQ DQLHF DEDE+NLLNSYLQISRSENPTKNSLPTLDS A DRLQTAVGPKFSHSVIADKLHRLKLLYHKFARTKS
Subjt:  MSTPHRSLPSNASTETLTLTQSNNQNDQLHFTDEDELNLLNSYLQISRSENPTKNSLPTLDSPALDRLQTAVGPKFSHSVIADKLHRLKLLYHKFARTKS

Query:  FIKTPHHRQILDLGRSIWGKSPTPITRKPQVISPSRILSRRIKQRSITRKAGVGVDVDLKNFPVLVAEFSRQFPRNGVWREGLRRMEEKNLKDMNEKWVL
        FIKTPH RQILDLGRSIWGKSPTP+TRKPQVISPSR+LSRRIKQRSITRK GVGVDVDLKNFPVLVAEFSRQFP NGVWR+GLRRM EKNLKDMNEKWVL
Subjt:  FIKTPHHRQILDLGRSIWGKSPTPITRKPQVISPSRILSRRIKQRSITRKAGVGVDVDLKNFPVLVAEFSRQFPRNGVWREGLRRMEEKNLKDMNEKWVL

Query:  LHIEGAELKARRAALLKQQLRITETNEDVN
        LHIEGAELKARRAALLK+QLR TETNEDVN
Subjt:  LHIEGAELKARRAALLKQQLRITETNEDVN

TrEMBL top hitse value%identityAlignment
A0A0A0KAX7 Uncharacterized protein8.1e-11091.3Show/hide
Query:  MSTPHRSLPSNASTETLTLTQSNNQNDQLHFTDEDELNLLNSYLQISRSENPTKNSLPTLDSPALDRLQTAVGPKFSHSVIADKLHRLKLLYHKFARTKS
        MST HRS PS+AS E  TLTQSNNQ DQLHF DEDE+NLLNSYLQISRSENPTKNSLPTLDS A DRLQTAVGPKFSHSVIADKLHRLKLLYHKFARTKS
Subjt:  MSTPHRSLPSNASTETLTLTQSNNQNDQLHFTDEDELNLLNSYLQISRSENPTKNSLPTLDSPALDRLQTAVGPKFSHSVIADKLHRLKLLYHKFARTKS

Query:  FIKTPHHRQILDLGRSIWGKSPTPITRKPQVISPSRILSRRIKQRSITRKAGVGVDVDLKNFPVLVAEFSRQFPRNGVWREGLRRMEEKNLKDMNEKWVL
        FIKTPH RQILDLGRSIWGKSPTP+TRKPQVISPSR+LSRRIKQRSITRK GVGVDVDLKNFPVLVAEFSRQFP NGVWR+GLRRM EKNLKDMNEKWVL
Subjt:  FIKTPHHRQILDLGRSIWGKSPTPITRKPQVISPSRILSRRIKQRSITRKAGVGVDVDLKNFPVLVAEFSRQFPRNGVWREGLRRMEEKNLKDMNEKWVL

Query:  LHIEGAELKARRAALLKQQLRITETNEDVN
        LHIEGAELKARRAALLK+QLR TETNEDVN
Subjt:  LHIEGAELKARRAALLKQQLRITETNEDVN

A0A0A0LBY9 Uncharacterized protein1.2e-3182.95Show/hide
Query:  RSITRKAG--VGVDVDLKNFPVLVAEFSRQFPRNGVWREGLRRMEEKNLKDMNEKWVLLHIEGAELKARRAALLKQQLRITETNEDVN
        R + ++ G  V VDVDLKNFPVL+AEFSRQFP NGVWR+GLRRMEEKNLKDMNEKWVLLHIEGAELKAR+ ALLKQQLR TETNEDVN
Subjt:  RSITRKAG--VGVDVDLKNFPVLVAEFSRQFPRNGVWREGLRRMEEKNLKDMNEKWVLLHIEGAELKARRAALLKQQLRITETNEDVN

A0A5A7T6T1 Serine/arginine repetitive matrix protein 1-like5.2e-10992.44Show/hide
Query:  MSTPHRSLPSNASTE----TLTLTQSNNQNDQLHFTDEDELNLLNSYLQISRSENPTKNSLPTLDSPALDRLQTAVGPKFSHSVIADKLHRLKLLYHKFA
        MSTPHRSLPSNAS E    TLTLTQ NNQ DQLHFTDEDE+NLL SYLQISRSENPTKNSLPTLDSPA DRLQTAVGPKFSHSVIADKLHRLKLLYHKFA
Subjt:  MSTPHRSLPSNASTE----TLTLTQSNNQNDQLHFTDEDELNLLNSYLQISRSENPTKNSLPTLDSPALDRLQTAVGPKFSHSVIADKLHRLKLLYHKFA

Query:  RTKSFIKTPHHRQILDLGRSIWGKSPTPITRKPQVISPSRILSRRIKQRSITRKAGVGVDVDLKNFPVLVAEFSRQFPRNGVWREGLRRMEEKNLKDMNE
        RTKSFIKTPH RQILDLGRSIWGKSPTPITRKPQVISPSRILSRRIKQRS TRK GVGVD+DLKNFPVLVAEFS+QFP NGVWREGLRRMEEKNLKDMNE
Subjt:  RTKSFIKTPHHRQILDLGRSIWGKSPTPITRKPQVISPSRILSRRIKQRSITRKAGVGVDVDLKNFPVLVAEFSRQFPRNGVWREGLRRMEEKNLKDMNE

Query:  KWVLLHIEGAELKARRAALLKQQLR
        KWVLLHIEGAELKARRAALLKQQL+
Subjt:  KWVLLHIEGAELKARRAALLKQQLR

A0A5J5C8J5 Uncharacterized protein5.9e-2841.83Show/hide
Query:  ASTETLTLTQSNNQNDQLHFTDEDELNLLNSYLQISRSENPTKNSLPTLDSPALDRLQTAVGPKFSHSVIADKLHRLKLLYHKFARTKSFIKTPHHRQIL
        AS E  T+T   +Q  +L FT+EDE+ LL ++L+ ++S   TK+S   L S         +G +FS S I DKL RL+  YHK ARTKSFIKTPH RQI 
Subjt:  ASTETLTLTQSNNQNDQLHFTDEDELNLLNSYLQISRSENPTKNSLPTLDSPALDRLQTAVGPKFSHSVIADKLHRLKLLYHKFARTKSFIKTPHHRQIL

Query:  DLGRSIWGKSPTPITRKPQVISPSRILSRRIKQRSITRKAGVGVDVDLKNFPVLVAEFSRQFPRNGVWREGLRRMEEKNLKDMNEKWVLLHIEGAELKAR
        ++   IWGK  T  +      SP R      +      + G   +V L+NFPVL  E  R FP N V+REGL+ +    L+ +NEKW+   +E A L A+
Subjt:  DLGRSIWGKSPTPITRKPQVISPSRILSRRIKQRSITRKAGVGVDVDLKNFPVLVAEFSRQFPRNGVWREGLRRMEEKNLKDMNEKWVLLHIEGAELKAR

Query:  RAALLKQQ
        RA L  +Q
Subjt:  RAALLKQQ

V4RSW9 Uncharacterized protein4.5e-2836Show/hide
Query:  FTDEDELNLLNSYLQI-----SRSENPTKNSLPTLDSPALDRLQTAVGPKFSHSVIADKLHRLKLLYHKFARTKSFIKTPHHRQILDLGRSIWGKSPTPI
        FTD DE+ LL  + ++     S S + T NS  TLDS + +R+ +++G KF+H+ I DK+ RL++ YHK AR+KS IKTPH + +  + + IWGK  T  
Subjt:  FTDEDELNLLNSYLQI-----SRSENPTKNSLPTLDSPALDRLQTAVGPKFSHSVIADKLHRLKLLYHKFARTKSFIKTPHHRQILDLGRSIWGKSPTPI

Query:  TRKPQVISPSRIL---SRRIKQRSITRKAGVGVDVDLKNFPVLVAEFSRQFPRNGVWREGLRRMEEKNLKDMNEKWVLLHIEGAELKARRAALLKQQLRI
         ++ + +  S          +Q++   +       +L  +PVL  E S+  P N VWRE L+ +    LK+MN+KW+L+ IE A++ +++A L+K+Q ++
Subjt:  TRKPQVISPSRIL---SRRIKQRSITRKAGVGVDVDLKNFPVLVAEFSRQFPRNGVWREGLRRMEEKNLKDMNEKWVLLHIEGAELKARRAALLKQQLRI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAACGCCCCACCGGTCACTGCCGTCCAACGCCTCTACCGAAACCCTAACCCTAACCCAATCCAACAATCAAAACGATCAACTCCATTTCACCGACGAAGATGAACT
CAATCTCCTGAATTCCTACCTCCAAATCTCCAGATCCGAAAACCCCACCAAGAATTCTCTCCCTACTCTCGATTCTCCGGCCTTGGACCGCCTTCAGACCGCCGTCGGCC
CAAAATTCTCCCACTCCGTCATCGCCGATAAGCTCCATCGCCTCAAACTCCTGTACCACAAATTCGCAAGAACAAAATCCTTCATCAAAACTCCTCACCACCGTCAGATC
CTTGACCTCGGCCGCAGCATCTGGGGAAAATCCCCCACACCTATAACAAGAAAACCACAGGTAATTTCACCTTCAAGGATACTTTCACGAAGAATCAAACAAAGATCAAT
TACTAGAAAAGCAGGGGTTGGGGTTGATGTTGATCTGAAGAACTTTCCTGTTCTTGTGGCTGAATTTTCTCGGCAGTTTCCGAGGAATGGGGTGTGGAGAGAAGGGCTGA
GGAGAATGGAGGAGAAGAATTTGAAGGATATGAATGAGAAATGGGTTTTGTTGCATATTGAAGGGGCTGAGCTTAAGGCAAGAAGGGCTGCTTTATTAAAGCAGCAACTT
AGAATTACAGAGACTAATGAAGATGTGAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCAACGCCCCACCGGTCACTGCCGTCCAACGCCTCTACCGAAACCCTAACCCTAACCCAATCCAACAATCAAAACGATCAACTCCATTTCACCGACGAAGATGAACT
CAATCTCCTGAATTCCTACCTCCAAATCTCCAGATCCGAAAACCCCACCAAGAATTCTCTCCCTACTCTCGATTCTCCGGCCTTGGACCGCCTTCAGACCGCCGTCGGCC
CAAAATTCTCCCACTCCGTCATCGCCGATAAGCTCCATCGCCTCAAACTCCTGTACCACAAATTCGCAAGAACAAAATCCTTCATCAAAACTCCTCACCACCGTCAGATC
CTTGACCTCGGCCGCAGCATCTGGGGAAAATCCCCCACACCTATAACAAGAAAACCACAGGTAATTTCACCTTCAAGGATACTTTCACGAAGAATCAAACAAAGATCAAT
TACTAGAAAAGCAGGGGTTGGGGTTGATGTTGATCTGAAGAACTTTCCTGTTCTTGTGGCTGAATTTTCTCGGCAGTTTCCGAGGAATGGGGTGTGGAGAGAAGGGCTGA
GGAGAATGGAGGAGAAGAATTTGAAGGATATGAATGAGAAATGGGTTTTGTTGCATATTGAAGGGGCTGAGCTTAAGGCAAGAAGGGCTGCTTTATTAAAGCAGCAACTT
AGAATTACAGAGACTAATGAAGATGTGAATTAG
Protein sequenceShow/hide protein sequence
MSTPHRSLPSNASTETLTLTQSNNQNDQLHFTDEDELNLLNSYLQISRSENPTKNSLPTLDSPALDRLQTAVGPKFSHSVIADKLHRLKLLYHKFARTKSFIKTPHHRQI
LDLGRSIWGKSPTPITRKPQVISPSRILSRRIKQRSITRKAGVGVDVDLKNFPVLVAEFSRQFPRNGVWREGLRRMEEKNLKDMNEKWVLLHIEGAELKARRAALLKQQL
RITETNEDVN