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PI0013687 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013687
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionHTH myb-type domain-containing protein
Genome locationchr10:8766422..8768786
RNA-Seq ExpressionPI0013687
SyntenyPI0013687
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008457979.1 PREDICTED: putative uncharacterized protein DDB_G0271606 [Cucumis melo]9.2e-1577.61Show/hide
Query:  VADHHEV----TITNNNNTQHH---QQHHSSSQN-QLEDLLSCLEVERLKIDAFKRELPLCMQLLTN
        V++HH+V    T TNNNNTQ H   QQHHSSSQN QL+DLLSCLE ERLKIDAFKRELPLCMQLLTN
Subjt:  VADHHEV----TITNNNNTQHH---QQHHSSSQN-QLEDLLSCLEVERLKIDAFKRELPLCMQLLTN
XP_011648670.1 myb family transcription factor EFM [Cucumis sativus]3.8e-1682.54Show/hide
Query:  VADHHEVTITNNNN---TQHHQQHHSSSQN-QLEDLLSCLEVERLKIDAFKRELPLCMQLLTN
        V+DHH+V ITNNNN     H QQHHSSSQN QLEDLLSCLE ERLKIDAFKRELPLCMQLLTN
Subjt:  VADHHEVTITNNNN---TQHHQQHHSSSQN-QLEDLLSCLEVERLKIDAFKRELPLCMQLLTN
XP_022999194.1 myb family transcription factor EFM-like isoform X1 [Cucurbita maxima]1.4e-0782.93Show/hide
Query:  QQHHSSSQNQLEDLLSCLEVERLKIDAFKRELPLCMQLLTN
        ++ HS SQ QLEDLLSCLE ERLKIDAFKRELPLCM LLTN
Subjt:  QQHHSSSQNQLEDLLSCLEVERLKIDAFKRELPLCMQLLTN
XP_022999195.1 myb family transcription factor EFM-like isoform X2 [Cucurbita maxima]1.4e-0782.93Show/hide
Query:  QQHHSSSQNQLEDLLSCLEVERLKIDAFKRELPLCMQLLTN
        ++ HS SQ QLEDLLSCLE ERLKIDAFKRELPLCM LLTN
Subjt:  QQHHSSSQNQLEDLLSCLEVERLKIDAFKRELPLCMQLLTN
XP_038890839.1 myb family transcription factor EFM [Benincasa hispida]2.7e-1477.97Show/hide
Query:  VADHHEVTITNNNNTQHHQQHHSSSQNQLEDLLSCLEVERLKIDAFKRELPLCMQLLTN
        V+DH     TNN   QHHQ HH SSQNQLEDLLS LE ERLKIDAFKRELPLCMQLLTN
Subjt:  VADHHEVTITNNNNTQHHQQHHSSSQNQLEDLLSCLEVERLKIDAFKRELPLCMQLLTN
TrEMBL top hitse value%identityAlignment
A0A0A0LKW2 HTH myb-type domain-containing protein1.8e-1682.54Show/hide
Query:  VADHHEVTITNNNN---TQHHQQHHSSSQN-QLEDLLSCLEVERLKIDAFKRELPLCMQLLTN
        V+DHH+V ITNNNN     H QQHHSSSQN QLEDLLSCLE ERLKIDAFKRELPLCMQLLTN
Subjt:  VADHHEVTITNNNN---TQHHQQHHSSSQN-QLEDLLSCLEVERLKIDAFKRELPLCMQLLTN
A0A1S3C6R4 HTH myb-type domain-containing protein4.5e-1577.61Show/hide
Query:  VADHHEV----TITNNNNTQHH---QQHHSSSQN-QLEDLLSCLEVERLKIDAFKRELPLCMQLLTN
        V++HH+V    T TNNNNTQ H   QQHHSSSQN QL+DLLSCLE ERLKIDAFKRELPLCMQLLTN
Subjt:  VADHHEV----TITNNNNTQHH---QQHHSSSQN-QLEDLLSCLEVERLKIDAFKRELPLCMQLLTN
A0A6J1G3G0 myb family transcription factor EFM-like isoform X25.9e-0778.05Show/hide
Query:  QQHHSSSQNQLEDLLSCLEVERLKIDAFKRELPLCMQLLTN
        ++ HS SQ QL+DLLSCLE ERLKIDAFKRELPLCM LL N
Subjt:  QQHHSSSQNQLEDLLSCLEVERLKIDAFKRELPLCMQLLTN
A0A6J1KEP3 myb family transcription factor EFM-like isoform X26.9e-0882.93Show/hide
Query:  QQHHSSSQNQLEDLLSCLEVERLKIDAFKRELPLCMQLLTN
        ++ HS SQ QLEDLLSCLE ERLKIDAFKRELPLCM LLTN
Subjt:  QQHHSSSQNQLEDLLSCLEVERLKIDAFKRELPLCMQLLTN
A0A6J1KGC8 myb family transcription factor EFM-like isoform X16.9e-0882.93Show/hide
Query:  QQHHSSSQNQLEDLLSCLEVERLKIDAFKRELPLCMQLLTN
        ++ HS SQ QLEDLLSCLE ERLKIDAFKRELPLCM LLTN
Subjt:  QQHHSSSQNQLEDLLSCLEVERLKIDAFKRELPLCMQLLTN
SwissProt top hitse value%identityAlignment
Q5VRW2 Transcription factor NIGTH11.2e-0452.63Show/hide
Query:  DHHEVTITNNNNTQHHQQHHSSSQNQLEDLLSCLEVERLKIDAFKRELPLCMQLLTN
        DHH +T     + Q  Q        +L++ LS LE ERLKIDAFKRELPLCMQLL +
Subjt:  DHHEVTITNNNNTQHHQQHHSSSQNQLEDLLSCLEVERLKIDAFKRELPLCMQLLTN
Q9ZQ85 Myb family transcription factor EFM9.6e-0784.85Show/hide
Query:  NQLEDLLSCLEVERLKIDAFKRELPLCMQLLTN
        ++LEDLLS LE ERLKIDAFKRELPLCMQLL N
Subjt:  NQLEDLLSCLEVERLKIDAFKRELPLCMQLLTN
Arabidopsis top hitse value%identityAlignment
AT2G03500.1 Homeodomain-like superfamily protein6.8e-0884.85Show/hide
Query:  NQLEDLLSCLEVERLKIDAFKRELPLCMQLLTN
        ++LEDLLS LE ERLKIDAFKRELPLCMQLL N
Subjt:  NQLEDLLSCLEVERLKIDAFKRELPLCMQLLTN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCAGCAAGAGGGAAGAATGAGCGGCAAGGAGAAGAATGACATAACCCTAAACCCTATAAGTCGTCAAACATGCAAGACGGACAGGATCGAGCATGCAACGACTGG
AGTGGGGAGGGAGACGAAAAGTCATTCGGGAGAAGGAGATGAAAAGCCATTCGAGAGAAGGAGAGGAAAAGTTGTTTCGGGGAGGGAGACGAGGAGAAGGGAGATGGACA
GTAAGAAGAGAAGGAGGAGGGAACAGTGTTCGGAGGAAGAGAGGGATGAGGGAACAGTGTTCGAAGACGAAGAGAGGGATGAGAGAACAGTGTGCGGAGACAAAGAGATG
GAGGACGAAACAGTGCAAGTGGAGATTGAGGTGGAGAGCACAACAGTAGGGATTAAGGGCATGGATGAAGGAGATACTAGTTATGTGGTGTCAGTCGCCACCACAGCCAT
AGTGGAGCTTTGCTGCTGGGATTCTCCGTCTGTCGCCACGCCGGTCTTCGCCGGAATTCTTGTTGCGGATCATCATGAAGTGACAATTACTAATAATAATAATACTCAAC
ATCATCAACAACATCATTCTTCGTCACAAAATCAACTTGAAGATTTGCTCTCTTGTCTTGAAGTTGAAAGACTCAAAATTGATGCTTTCAAACGTGAACTTCCTCTTTGC
ATGCAACTTTTAACCAATGGTAAGCTTTCATTAATATCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCAGCAAGAGGGAAGAATGAGCGGCAAGGAGAAGAATGACATAACCCTAAACCCTATAAGTCGTCAAACATGCAAGACGGACAGGATCGAGCATGCAACGACTGG
AGTGGGGAGGGAGACGAAAAGTCATTCGGGAGAAGGAGATGAAAAGCCATTCGAGAGAAGGAGAGGAAAAGTTGTTTCGGGGAGGGAGACGAGGAGAAGGGAGATGGACA
GTAAGAAGAGAAGGAGGAGGGAACAGTGTTCGGAGGAAGAGAGGGATGAGGGAACAGTGTTCGAAGACGAAGAGAGGGATGAGAGAACAGTGTGCGGAGACAAAGAGATG
GAGGACGAAACAGTGCAAGTGGAGATTGAGGTGGAGAGCACAACAGTAGGGATTAAGGGCATGGATGAAGGAGATACTAGTTATGTGGTGTCAGTCGCCACCACAGCCAT
AGTGGAGCTTTGCTGCTGGGATTCTCCGTCTGTCGCCACGCCGGTCTTCGCCGGAATTCTTGTTGCGGATCATCATGAAGTGACAATTACTAATAATAATAATACTCAAC
ATCATCAACAACATCATTCTTCGTCACAAAATCAACTTGAAGATTTGCTCTCTTGTCTTGAAGTTGAAAGACTCAAAATTGATGCTTTCAAACGTGAACTTCCTCTTTGC
ATGCAACTTTTAACCAATGGTAAGCTTTCATTAATATCCTAA
Protein sequenceShow/hide protein sequence
MEQQEGRMSGKEKNDITLNPISRQTCKTDRIEHATTGVGRETKSHSGEGDEKPFERRRGKVVSGRETRRREMDSKKRRRREQCSEEERDEGTVFEDEERDERTVCGDKEM
EDETVQVEIEVESTTVGIKGMDEGDTSYVVSVATTAIVELCCWDSPSVATPVFAGILVADHHEVTITNNNNTQHHQQHHSSSQNQLEDLLSCLEVERLKIDAFKRELPLC
MQLLTNGKLSLIS