; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0013693 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013693
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr06:12199023..12199247
RNA-Seq ExpressionPI0013693
SyntenyPI0013693
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003723 - RNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036023.1 retrotransposon protein [Cucumis melo var. makuwa]2.2e-1056.16Show/hide
Query:  MAQQQLQERMASTEKEMVDLKEILLGLKMSIDRLSEDIKENSSTRKKEESGTFDASVLKLKGKAKEVETTETG
        MAQ+ L+ER   TEKE+V LKE++L +K S+DRL+E+++EN S +K+EESGT D SV+KLKGK +E + T+ G
Subjt:  MAQQQLQERMASTEKEMVDLKEILLGLKMSIDRLSEDIKENSSTRKKEESGTFDASVLKLKGKAKEVETTETG

KAA0041225.1 uncharacterized protein E6C27_scaffold128G001860 [Cucumis melo var. makuwa]1.7e-1052.86Show/hide
Query:  MAQQQLQERMASTEKEMVDLKEILLGLKMSIDRLSEDIKENSSTRKKEESGTFDASVLKLKGKAKEVETT
        MAQ+Q++ER+  TEKE++ LKE++L +K S+DRL+++++EN S +KKEESGT D S++K+KGK +E + T
Subjt:  MAQQQLQERMASTEKEMVDLKEILLGLKMSIDRLSEDIKENSSTRKKEESGTFDASVLKLKGKAKEVETT

KAA0063363.1 retrotransposon protein [Cucumis melo var. makuwa]2.8e-1052.86Show/hide
Query:  MAQQQLQERMASTEKEMVDLKEILLGLKMSIDRLSEDIKENSSTRKKEESGTFDASVLKLKGKAKEVETT
        MAQQQ++ER+  TEKE++ LKE++L +K S+DRL+++++EN S +KKEESGT + S++K+KGK +E + T
Subjt:  MAQQQLQERMASTEKEMVDLKEILLGLKMSIDRLSEDIKENSSTRKKEESGTFDASVLKLKGKAKEVETT

TYJ98820.1 retrotransposon protein [Cucumis melo var. makuwa]2.2e-1056.16Show/hide
Query:  MAQQQLQERMASTEKEMVDLKEILLGLKMSIDRLSEDIKENSSTRKKEESGTFDASVLKLKGKAKEVETTETG
        MAQ+ L+ER   TEKE+V LKE++L +K S+DRL+E+++EN S +K+EESGT D SV+KLKGK +E + T+ G
Subjt:  MAQQQLQERMASTEKEMVDLKEILLGLKMSIDRLSEDIKENSSTRKKEESGTFDASVLKLKGKAKEVETTETG

TYK16028.1 uncharacterized protein E5676_scaffold32G00230 [Cucumis melo var. makuwa]1.7e-1052.86Show/hide
Query:  MAQQQLQERMASTEKEMVDLKEILLGLKMSIDRLSEDIKENSSTRKKEESGTFDASVLKLKGKAKEVETT
        MAQ+Q++ER+  TEKE++ LKE++L +K S+DRL+++++EN S +KKEESGT D S++K+KGK +E + T
Subjt:  MAQQQLQERMASTEKEMVDLKEILLGLKMSIDRLSEDIKENSSTRKKEESGTFDASVLKLKGKAKEVETT

TrEMBL top hitse value%identityAlignment
A0A5A7SZF0 Retrotransposon protein1.1e-1056.16Show/hide
Query:  MAQQQLQERMASTEKEMVDLKEILLGLKMSIDRLSEDIKENSSTRKKEESGTFDASVLKLKGKAKEVETTETG
        MAQ+ L+ER   TEKE+V LKE++L +K S+DRL+E+++EN S +K+EESGT D SV+KLKGK +E + T+ G
Subjt:  MAQQQLQERMASTEKEMVDLKEILLGLKMSIDRLSEDIKENSSTRKKEESGTFDASVLKLKGKAKEVETTETG

A0A5A7TII1 Uncharacterized protein8.1e-1152.86Show/hide
Query:  MAQQQLQERMASTEKEMVDLKEILLGLKMSIDRLSEDIKENSSTRKKEESGTFDASVLKLKGKAKEVETT
        MAQ+Q++ER+  TEKE++ LKE++L +K S+DRL+++++EN S +KKEESGT D S++K+KGK +E + T
Subjt:  MAQQQLQERMASTEKEMVDLKEILLGLKMSIDRLSEDIKENSSTRKKEESGTFDASVLKLKGKAKEVETT

A0A5D3BGA5 Retrotransposon protein1.1e-1056.16Show/hide
Query:  MAQQQLQERMASTEKEMVDLKEILLGLKMSIDRLSEDIKENSSTRKKEESGTFDASVLKLKGKAKEVETTETG
        MAQ+ L+ER   TEKE+V LKE++L +K S+DRL+E+++EN S +K+EESGT D SV+KLKGK +E + T+ G
Subjt:  MAQQQLQERMASTEKEMVDLKEILLGLKMSIDRLSEDIKENSSTRKKEESGTFDASVLKLKGKAKEVETTETG

A0A5D3C936 Transposon Tf2-1 polyprotein isoform X11.4e-1054.79Show/hide
Query:  MAQQQLQERMASTEKEMVDLKEILLGLKMSIDRLSEDIKENSSTRKKEESGTFDASVLKLKGKAKEVE-TTET
        MAQ+Q++ER+  T+KE++ LKE++L +K +++RL+++IKE+ S RK+EESGTFD SV+KLKGK +E++  TET
Subjt:  MAQQQLQERMASTEKEMVDLKEILLGLKMSIDRLSEDIKENSSTRKKEESGTFDASVLKLKGKAKEVE-TTET

A0A5D3CXP0 Uncharacterized protein8.1e-1152.86Show/hide
Query:  MAQQQLQERMASTEKEMVDLKEILLGLKMSIDRLSEDIKENSSTRKKEESGTFDASVLKLKGKAKEVETT
        MAQ+Q++ER+  TEKE++ LKE++L +K S+DRL+++++EN S +KKEESGT D S++K+KGK +E + T
Subjt:  MAQQQLQERMASTEKEMVDLKEILLGLKMSIDRLSEDIKENSSTRKKEESGTFDASVLKLKGKAKEVETT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACAACAACAACTTCAGGAAAGAATGGCATCCACAGAGAAAGAGATGGTGGACTTGAAAGAAATACTCCTTGGATTGAAAATGAGCATTGACCGTCTATCTGAAGA
CATAAAGGAGAACAGTTCTACGCGGAAAAAGGAAGAATCAGGGACATTTGATGCCTCTGTGCTGAAACTGAAAGGAAAGGCAAAGGAAGTGGAAACGACTGAAACTGGTG
AATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCACAACAACAACTTCAGGAAAGAATGGCATCCACAGAGAAAGAGATGGTGGACTTGAAAGAAATACTCCTTGGATTGAAAATGAGCATTGACCGTCTATCTGAAGA
CATAAAGGAGAACAGTTCTACGCGGAAAAAGGAAGAATCAGGGACATTTGATGCCTCTGTGCTGAAACTGAAAGGAAAGGCAAAGGAAGTGGAAACGACTGAAACTGGTG
AATAA
Protein sequenceShow/hide protein sequence
MAQQQLQERMASTEKEMVDLKEILLGLKMSIDRLSEDIKENSSTRKKEESGTFDASVLKLKGKAKEVETTETGE