| GenBank top hits | e value | %identity | Alignment |
|---|
| TYK20394.1 DNA-directed RNA polymerases II and IV subunit 5A-like isoform X1 [Cucumis melo var. makuwa] | 1.1e-99 | 89.69 | Show/hide |
Query: MVFSEEEITKLFRVRKTVLQMLKDRGYFVGDFELDMSKAQFKNKFGESMKREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVETYVGRMKSENVARAIF
MVF EEEITKLFRVRKTVLQMLKDRGYFVGDFELDMSKAQFKNKFGE+MKREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVETYVGRMKSENV RAIF
Subjt: MVFSEEEITKLFRVRKTVLQMLKDRGYFVGDFELDMSKAQFKNKFGESMKREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVETYVGRMKSENVARAIF
Query: VVQLNLTPFARNKIAELSSTKVHLEVFQETELMVNIKEHVLIPEHQTLTDEEKKTLLERYTVKETQ----------------LPRMQVTDPIARYYGLKR
VVQLNLTPFARNKIAELSSTKVHLEVFQE ELMVNIKEHVLIPEHQ+LTDEEKKTLL RYTVKETQ LPRMQVTDPIARYYGLKR
Subjt: VVQLNLTPFARNKIAELSSTKVHLEVFQETELMVNIKEHVLIPEHQTLTDEEKKTLLERYTVKETQ----------------LPRMQVTDPIARYYGLKR
Query: GHVVKIIRPSETAGRYVTYRYVV
G VVKIIRPSETAGRYVTYRYVV
Subjt: GHVVKIIRPSETAGRYVTYRYVV
|
|
| XP_004143184.1 DNA-directed RNA polymerases II and IV subunit 5A [Cucumis sativus] | 8.0e-103 | 95.65 | Show/hide |
Query: MVFSEEEITKLFRVRKTVLQMLKDRGYFVGDFELDMSKAQFKNKFGESMKREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVETYVGRMKSENVARAIF
MVF EEEITKLFRVRKTVLQMLKDRGYFVGDFELDMSK QFKNKFGE+MKREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVETYVGRMKSENV RAIF
Subjt: MVFSEEEITKLFRVRKTVLQMLKDRGYFVGDFELDMSKAQFKNKFGESMKREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVETYVGRMKSENVARAIF
Query: VVQLNLTPFARNKIAELSSTKVHLEVFQETELMVNIKEHVLIPEHQTLTDEEKKTLLERYTVKETQLPRMQVTDPIARYYGLKRGHVVKIIRPSETAGRY
VVQLNLTPFARNKIAELSS+K+HLEVFQETEL+VNIKEHVLIPEHQTLTDEEKKTLL RYTVKETQLPRMQVTDPI+RYYGLKRGHVVKIIRPSETAGRY
Subjt: VVQLNLTPFARNKIAELSSTKVHLEVFQETELMVNIKEHVLIPEHQTLTDEEKKTLLERYTVKETQLPRMQVTDPIARYYGLKRGHVVKIIRPSETAGRY
Query: VTYRYVV
VTYRYVV
Subjt: VTYRYVV
|
|
| XP_008456369.1 PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like isoform X1 [Cucumis melo] | 8.0e-103 | 96.62 | Show/hide |
Query: MVFSEEEITKLFRVRKTVLQMLKDRGYFVGDFELDMSKAQFKNKFGESMKREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVETYVGRMKSENVARAIF
MVF EEEITKLFRVRKTVLQMLKDRGYFVGDFELDMSKAQFKNKFGE+MKREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVETYVGRMKSENV RAIF
Subjt: MVFSEEEITKLFRVRKTVLQMLKDRGYFVGDFELDMSKAQFKNKFGESMKREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVETYVGRMKSENVARAIF
Query: VVQLNLTPFARNKIAELSSTKVHLEVFQETELMVNIKEHVLIPEHQTLTDEEKKTLLERYTVKETQLPRMQVTDPIARYYGLKRGHVVKIIRPSETAGRY
VVQLNLTPFARNKIAELSSTKVHLEVFQE ELMVNIKEHVLIPEHQ+LTDEEKKTLL RYTVKETQLPRMQVTDPIARYYGLKRG VVKIIRPSETAGRY
Subjt: VVQLNLTPFARNKIAELSSTKVHLEVFQETELMVNIKEHVLIPEHQTLTDEEKKTLLERYTVKETQLPRMQVTDPIARYYGLKRGHVVKIIRPSETAGRY
Query: VTYRYVV
VTYRYVV
Subjt: VTYRYVV
|
|
| XP_008456371.1 PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like isoform X2 [Cucumis melo] | 1.3e-92 | 96.79 | Show/hide |
Query: MLKDRGYFVGDFELDMSKAQFKNKFGESMKREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVETYVGRMKSENVARAIFVVQLNLTPFARNKIAELSST
MLKDRGYFVGDFELDMSKAQFKNKFGE+MKREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVETYVGRMKSENV RAIFVVQLNLTPFARNKIAELSST
Subjt: MLKDRGYFVGDFELDMSKAQFKNKFGESMKREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVETYVGRMKSENVARAIFVVQLNLTPFARNKIAELSST
Query: KVHLEVFQETELMVNIKEHVLIPEHQTLTDEEKKTLLERYTVKETQLPRMQVTDPIARYYGLKRGHVVKIIRPSETAGRYVTYRYVV
KVHLEVFQE ELMVNIKEHVLIPEHQ+LTDEEKKTLL RYTVKETQLPRMQVTDPIARYYGLKRG VVKIIRPSETAGRYVTYRYVV
Subjt: KVHLEVFQETELMVNIKEHVLIPEHQTLTDEEKKTLLERYTVKETQLPRMQVTDPIARYYGLKRGHVVKIIRPSETAGRYVTYRYVV
|
|
| XP_038895255.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Benincasa hispida] | 2.7e-90 | 85.99 | Show/hide |
Query: MVFSEEEITKLFRVRKTVLQMLKDRGYFVGDFELDMSKAQFKNKFGESMKREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVETYVGRMKSENVARAIF
MV SEEEITKLFRVRKTVLQMLKDRGYFVGD EL MS+ QFK KFGESMKREDLVINKSKRNNSS+QIY+FFPEEPKVGIK V+TYV RMKSENV+RA+
Subjt: MVFSEEEITKLFRVRKTVLQMLKDRGYFVGDFELDMSKAQFKNKFGESMKREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVETYVGRMKSENVARAIF
Query: VVQLNLTPFARNKIAELSSTKVHLEVFQETELMVNIKEHVLIPEHQTLTDEEKKTLLERYTVKETQLPRMQVTDPIARYYGLKRGHVVKIIRPSETAGRY
VVQ NLTPFAR K+ E+SS + HLEVFQE ELMVNIK+HVLIPEHQ LT+EEKKTLLERYTVKETQLPR+QVTDPIARYYG+KRG VVKIIRPSETAGRY
Subjt: VVQLNLTPFARNKIAELSSTKVHLEVFQETELMVNIKEHVLIPEHQTLTDEEKKTLLERYTVKETQLPRMQVTDPIARYYGLKRGHVVKIIRPSETAGRY
Query: VTYRYVV
VTYRYVV
Subjt: VTYRYVV
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0KF69 Uncharacterized protein | 3.9e-103 | 95.65 | Show/hide |
Query: MVFSEEEITKLFRVRKTVLQMLKDRGYFVGDFELDMSKAQFKNKFGESMKREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVETYVGRMKSENVARAIF
MVF EEEITKLFRVRKTVLQMLKDRGYFVGDFELDMSK QFKNKFGE+MKREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVETYVGRMKSENV RAIF
Subjt: MVFSEEEITKLFRVRKTVLQMLKDRGYFVGDFELDMSKAQFKNKFGESMKREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVETYVGRMKSENVARAIF
Query: VVQLNLTPFARNKIAELSSTKVHLEVFQETELMVNIKEHVLIPEHQTLTDEEKKTLLERYTVKETQLPRMQVTDPIARYYGLKRGHVVKIIRPSETAGRY
VVQLNLTPFARNKIAELSS+K+HLEVFQETEL+VNIKEHVLIPEHQTLTDEEKKTLL RYTVKETQLPRMQVTDPI+RYYGLKRGHVVKIIRPSETAGRY
Subjt: VVQLNLTPFARNKIAELSSTKVHLEVFQETELMVNIKEHVLIPEHQTLTDEEKKTLLERYTVKETQLPRMQVTDPIARYYGLKRGHVVKIIRPSETAGRY
Query: VTYRYVV
VTYRYVV
Subjt: VTYRYVV
|
|
| A0A1S3C2N2 DNA-directed RNA polymerases II and IV subunit 5A-like isoform X1 | 3.9e-103 | 96.62 | Show/hide |
Query: MVFSEEEITKLFRVRKTVLQMLKDRGYFVGDFELDMSKAQFKNKFGESMKREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVETYVGRMKSENVARAIF
MVF EEEITKLFRVRKTVLQMLKDRGYFVGDFELDMSKAQFKNKFGE+MKREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVETYVGRMKSENV RAIF
Subjt: MVFSEEEITKLFRVRKTVLQMLKDRGYFVGDFELDMSKAQFKNKFGESMKREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVETYVGRMKSENVARAIF
Query: VVQLNLTPFARNKIAELSSTKVHLEVFQETELMVNIKEHVLIPEHQTLTDEEKKTLLERYTVKETQLPRMQVTDPIARYYGLKRGHVVKIIRPSETAGRY
VVQLNLTPFARNKIAELSSTKVHLEVFQE ELMVNIKEHVLIPEHQ+LTDEEKKTLL RYTVKETQLPRMQVTDPIARYYGLKRG VVKIIRPSETAGRY
Subjt: VVQLNLTPFARNKIAELSSTKVHLEVFQETELMVNIKEHVLIPEHQTLTDEEKKTLLERYTVKETQLPRMQVTDPIARYYGLKRGHVVKIIRPSETAGRY
Query: VTYRYVV
VTYRYVV
Subjt: VTYRYVV
|
|
| A0A1S3C358 DNA-directed RNA polymerases II and IV subunit 5A-like isoform X2 | 6.2e-93 | 96.79 | Show/hide |
Query: MLKDRGYFVGDFELDMSKAQFKNKFGESMKREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVETYVGRMKSENVARAIFVVQLNLTPFARNKIAELSST
MLKDRGYFVGDFELDMSKAQFKNKFGE+MKREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVETYVGRMKSENV RAIFVVQLNLTPFARNKIAELSST
Subjt: MLKDRGYFVGDFELDMSKAQFKNKFGESMKREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVETYVGRMKSENVARAIFVVQLNLTPFARNKIAELSST
Query: KVHLEVFQETELMVNIKEHVLIPEHQTLTDEEKKTLLERYTVKETQLPRMQVTDPIARYYGLKRGHVVKIIRPSETAGRYVTYRYVV
KVHLEVFQE ELMVNIKEHVLIPEHQ+LTDEEKKTLL RYTVKETQLPRMQVTDPIARYYGLKRG VVKIIRPSETAGRYVTYRYVV
Subjt: KVHLEVFQETELMVNIKEHVLIPEHQTLTDEEKKTLLERYTVKETQLPRMQVTDPIARYYGLKRGHVVKIIRPSETAGRYVTYRYVV
|
|
| A0A5A7UJ12 DNA-directed RNA polymerases II and IV subunit 5A-like isoform X1 | 3.9e-103 | 96.62 | Show/hide |
Query: MVFSEEEITKLFRVRKTVLQMLKDRGYFVGDFELDMSKAQFKNKFGESMKREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVETYVGRMKSENVARAIF
MVF EEEITKLFRVRKTVLQMLKDRGYFVGDFELDMSKAQFKNKFGE+MKREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVETYVGRMKSENV RAIF
Subjt: MVFSEEEITKLFRVRKTVLQMLKDRGYFVGDFELDMSKAQFKNKFGESMKREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVETYVGRMKSENVARAIF
Query: VVQLNLTPFARNKIAELSSTKVHLEVFQETELMVNIKEHVLIPEHQTLTDEEKKTLLERYTVKETQLPRMQVTDPIARYYGLKRGHVVKIIRPSETAGRY
VVQLNLTPFARNKIAELSSTKVHLEVFQE ELMVNIKEHVLIPEHQ+LTDEEKKTLL RYTVKETQLPRMQVTDPIARYYGLKRG VVKIIRPSETAGRY
Subjt: VVQLNLTPFARNKIAELSSTKVHLEVFQETELMVNIKEHVLIPEHQTLTDEEKKTLLERYTVKETQLPRMQVTDPIARYYGLKRGHVVKIIRPSETAGRY
Query: VTYRYVV
VTYRYVV
Subjt: VTYRYVV
|
|
| A0A5D3DA58 DNA-directed RNA polymerases II and IV subunit 5A-like isoform X1 | 5.2e-100 | 89.69 | Show/hide |
Query: MVFSEEEITKLFRVRKTVLQMLKDRGYFVGDFELDMSKAQFKNKFGESMKREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVETYVGRMKSENVARAIF
MVF EEEITKLFRVRKTVLQMLKDRGYFVGDFELDMSKAQFKNKFGE+MKREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVETYVGRMKSENV RAIF
Subjt: MVFSEEEITKLFRVRKTVLQMLKDRGYFVGDFELDMSKAQFKNKFGESMKREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVETYVGRMKSENVARAIF
Query: VVQLNLTPFARNKIAELSSTKVHLEVFQETELMVNIKEHVLIPEHQTLTDEEKKTLLERYTVKETQ----------------LPRMQVTDPIARYYGLKR
VVQLNLTPFARNKIAELSSTKVHLEVFQE ELMVNIKEHVLIPEHQ+LTDEEKKTLL RYTVKETQ LPRMQVTDPIARYYGLKR
Subjt: VVQLNLTPFARNKIAELSSTKVHLEVFQETELMVNIKEHVLIPEHQTLTDEEKKTLLERYTVKETQ----------------LPRMQVTDPIARYYGLKR
Query: GHVVKIIRPSETAGRYVTYRYVV
G VVKIIRPSETAGRYVTYRYVV
Subjt: GHVVKIIRPSETAGRYVTYRYVV
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| A8XGH1 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 3.3e-51 | 51.89 | Show/hide |
Query: MVFSEEEITKLFRVRKTVLQMLKDRGYFVGDFELDMSKAQFKNKFGE-----SMKREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVETYVGRMKSENV
M E E +L+R+RKTVLQM+ DRGY V ELD FK FG+ R DL I + ++ +DQ++VFFPE+ K+GIK ++ +M+ +N+
Subjt: MVFSEEEITKLFRVRKTVLQMLKDRGYFVGDFELDMSKAQFKNKFGE-----SMKREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVETYVGRMKSENV
Query: ARAIFVVQLNLTPFARNKIAELSSTKVHLEVFQETELMVNIKEHVLIPEHQTLTDEEKKTLLERYTVKETQLPRMQVTDPIARYYGLKRGHVVKIIRPSE
+RAI VVQ +TP A+ I ++ + K LE F E ELMVNI EH L+PEH +T EEK LL RY +K++QLPR+Q DP+ARY+GL+RG VVKIIRPSE
Subjt: ARAIFVVQLNLTPFARNKIAELSSTKVHLEVFQETELMVNIKEHVLIPEHQTLTDEEKKTLLERYTVKETQLPRMQVTDPIARYYGLKRGHVVKIIRPSE
Query: TAGRYVTYRYVV
TAGRY+TYR VV
Subjt: TAGRYVTYRYVV
|
|
| B0BNE2 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 8.7e-52 | 50.24 | Show/hide |
Query: EEEITKLFRVRKTVLQMLKDRGYFVGDFELDMSKAQFKNKFGES-----MKREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVETYVGRMKSENVARAI
EEE +L+++RKT++Q+ DRGY V ELD + +FK +FG+ +R DL + + ++ +DQ++VFFPEEPKVGIK ++ Y RM+ EN+ RA+
Subjt: EEEITKLFRVRKTVLQMLKDRGYFVGDFELDMSKAQFKNKFGES-----MKREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVETYVGRMKSENVARAI
Query: FVVQLNLTPFARNKIAELSSTKVHLEVFQETELMVNIKEHVLIPEHQTLTDEEKKTLLERYTVKETQLPRMQVTDPIARYYGLKRGHVVKIIRPSETAGR
VVQ +TP A+ + ++ + K LE F + EL++NI EH L+PEH +T EE LL RY ++E+QLPR+Q DP+ARY+G+KRG VVKIIRPSETAGR
Subjt: FVVQLNLTPFARNKIAELSSTKVHLEVFQETELMVNIKEHVLIPEHQTLTDEEKKTLLERYTVKETQLPRMQVTDPIARYYGLKRGHVVKIIRPSETAGR
Query: YVTYRYV
Y+TYR V
Subjt: YVTYRYV
|
|
| O81098 DNA-directed RNA polymerases II and IV subunit 5A | 2.9e-79 | 72.33 | Show/hide |
Query: VFSEEEITKLFRVRKTVLQMLKDRGYFVGDFELDMSKAQFKNKFGESMKREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVETYVGRMKSENVARAIFV
+ +EEE+ +L+R++KT++QML+DRGYF+ D EL M+K QF K G++MKREDLV K+KRN++SDQ+Y+FFP+E KVG+K ++ Y RMKSENV RAI V
Subjt: VFSEEEITKLFRVRKTVLQMLKDRGYFVGDFELDMSKAQFKNKFGESMKREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVETYVGRMKSENVARAIFV
Query: VQLNLTPFARNKIAELSSTKVHLEVFQETELMVNIKEHVLIPEHQTLTDEEKKTLLERYTVKETQLPRMQVTDPIARYYGLKRGHVVKIIRPSETAGRYV
VQ NLTPFAR I+E+SS K HLEVFQE E++VNIKEHVL+PEHQ LT EEKKTLLERYTVKETQLPR+QVTDPIARY+GLKRG VVKIIRPSETAGRYV
Subjt: VQLNLTPFARNKIAELSSTKVHLEVFQETELMVNIKEHVLIPEHQTLTDEEKKTLLERYTVKETQLPRMQVTDPIARYYGLKRGHVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| Q5R587 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 2.5e-51 | 49.76 | Show/hide |
Query: EEEITKLFRVRKTVLQMLKDRGYFVGDFELDMSKAQFKNKFGES-----MKREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVETYVGRMKSENVARAI
EEE +L+++RKT++Q+ DRGY V ELD + +F+ +FG+ +R DL + + ++ +DQ++VFFPEEPKVGIK ++ Y RM+ EN+ RA+
Subjt: EEEITKLFRVRKTVLQMLKDRGYFVGDFELDMSKAQFKNKFGES-----MKREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVETYVGRMKSENVARAI
Query: FVVQLNLTPFARNKIAELSSTKVHLEVFQETELMVNIKEHVLIPEHQTLTDEEKKTLLERYTVKETQLPRMQVTDPIARYYGLKRGHVVKIIRPSETAGR
VVQ +TP A+ + ++ + K LE F + EL++NI EH L+PEH +T EE LL RY ++E QLPR+Q DP+ARY+G+KRG VVKIIRPSETAGR
Subjt: FVVQLNLTPFARNKIAELSSTKVHLEVFQETELMVNIKEHVLIPEHQTLTDEEKKTLLERYTVKETQLPRMQVTDPIARYYGLKRGHVVKIIRPSETAGR
Query: YVTYRYV
Y+TYR V
Subjt: YVTYRYV
|
|
| Q80UW8 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 8.7e-52 | 50.24 | Show/hide |
Query: EEEITKLFRVRKTVLQMLKDRGYFVGDFELDMSKAQFKNKFGES-----MKREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVETYVGRMKSENVARAI
EEE +L+++RKT++Q+ DRGY V ELD + +FK +FG+ +R DL + + ++ +DQ++VFFPEEPKVGIK ++ Y RM+ EN+ RA+
Subjt: EEEITKLFRVRKTVLQMLKDRGYFVGDFELDMSKAQFKNKFGES-----MKREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVETYVGRMKSENVARAI
Query: FVVQLNLTPFARNKIAELSSTKVHLEVFQETELMVNIKEHVLIPEHQTLTDEEKKTLLERYTVKETQLPRMQVTDPIARYYGLKRGHVVKIIRPSETAGR
VVQ +TP A+ + ++ + K LE F + EL++NI EH L+PEH +T EE LL RY ++E+QLPR+Q DP+ARY+G+KRG VVKIIRPSETAGR
Subjt: FVVQLNLTPFARNKIAELSSTKVHLEVFQETELMVNIKEHVLIPEHQTLTDEEKKTLLERYTVKETQLPRMQVTDPIARYYGLKRGHVVKIIRPSETAGR
Query: YVTYRYV
Y+TYR V
Subjt: YVTYRYV
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G41340.1 RNA polymerase II fifth largest subunit, D | 2.5e-30 | 39.71 | Show/hide |
Query: SEEEITKLFRVRKTVLQMLKDRGYFVGDFELDMSKAQFKNKFGESMKREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVETYVGRMKS-ENVARAIFVV
S E K + R+T ++ML+DRGY V D ++++S QF+ +GE + L I+ R +SS +I V F V + + + S EN+ I V+
Subjt: SEEEITKLFRVRKTVLQMLKDRGYFVGDFELDMSKAQFKNKFGESMKREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVETYVGRMKS-ENVARAIFVV
Query: QLNLTPFARNKIAELSSTKVHLEVFQETELMVNIKEHVLIPEHQTLTDEEKKTLLERYTVKETQLPRMQVTDPIARYYGLKRGHVVKIIRPSETAGRYVT
Q ++T A K EL S KV E+F+ T+L+VN+ +HVL P+HQ L D+EK++LL++++++E QLPR+ DPI RYYGL+ G V+K+ E + +VT
Subjt: QLNLTPFARNKIAELSSTKVHLEVFQETELMVNIKEHVLIPEHQTLTDEEKKTLLERYTVKETQLPRMQVTDPIARYYGLKRGHVVKIIRPSETAGRYVT
Query: YRYV
YR V
Subjt: YRYV
|
|
| AT3G22320.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 2.0e-80 | 72.33 | Show/hide |
Query: VFSEEEITKLFRVRKTVLQMLKDRGYFVGDFELDMSKAQFKNKFGESMKREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVETYVGRMKSENVARAIFV
+ +EEE+ +L+R++KT++QML+DRGYF+ D EL M+K QF K G++MKREDLV K+KRN++SDQ+Y+FFP+E KVG+K ++ Y RMKSENV RAI V
Subjt: VFSEEEITKLFRVRKTVLQMLKDRGYFVGDFELDMSKAQFKNKFGESMKREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVETYVGRMKSENVARAIFV
Query: VQLNLTPFARNKIAELSSTKVHLEVFQETELMVNIKEHVLIPEHQTLTDEEKKTLLERYTVKETQLPRMQVTDPIARYYGLKRGHVVKIIRPSETAGRYV
VQ NLTPFAR I+E+SS K HLEVFQE E++VNIKEHVL+PEHQ LT EEKKTLLERYTVKETQLPR+QVTDPIARY+GLKRG VVKIIRPSETAGRYV
Subjt: VQLNLTPFARNKIAELSSTKVHLEVFQETELMVNIKEHVLIPEHQTLTDEEKKTLLERYTVKETQLPRMQVTDPIARYYGLKRGHVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| AT3G54490.1 RNA polymerase II fifth largest subunit, E | 6.7e-23 | 32.67 | Show/hide |
Query: EITKLFRVRKTVLQMLKDRGYFVGDFELDMSKAQFKNKFGESMKREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVET-YVGRMKSENVARAIFVVQLN
E + + R T +ML+DRGY V + EL ++ ++F++ FGE + E L I R++ +I V F + +K V ++ + + I V+Q
Subjt: EITKLFRVRKTVLQMLKDRGYFVGDFELDMSKAQFKNKFGESMKREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVET-YVGRMKSENVARAIFVVQLN
Query: LTPFARNKIAELSSTKVHLEVFQETELMVNIKEHVLIPEHQTLTDEEKKTLLERYTVKETQLPRMQVTDPIARYYGLKRGHVVKIIRPSETAGRYVTYRY
+ FA+ + T +E F +L+VNI +H+ P+ + L EEK+ LL ++ +++ QLP +Q D RYYGLK+ VVKI E G +VTYR
Subjt: LTPFARNKIAELSSTKVHLEVFQETELMVNIKEHVLIPEHQTLTDEEKKTLLERYTVKETQLPRMQVTDPIARYYGLKRGHVVKIIRPSETAGRYVTYRY
Query: VV
++
Subjt: VV
|
|
| AT3G57080.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 1.1e-28 | 36.95 | Show/hide |
Query: SEEEITKLFRVRKTVLQMLKDRGYFVGDFELDMSKAQFKNKFGESMKREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVETYVGRMKSENVARAIFVVQ
S EE + + R+ LQML+DRGY V D ++++S F+ +GE + L I+ R++S+ ++ + F V + + + V + S+ + +V
Subjt: SEEEITKLFRVRKTVLQMLKDRGYFVGDFELDMSKAQFKNKFGESMKREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVETYVGRMKSENVARAIFVVQ
Query: LNLTPFARNKIAELSSTKVHLEVFQETELMVNIKEHVLIPEHQTLTDEEKKTLLERYTVKETQLPRMQVTDPIARYYGLKRGHVVKIIRPSETAGRYVTY
N K EL S KV E+FQ T+L+VNI +H L P+HQ L DEEK TLL++++++E QLPR+ D I RYYGL++G VVK+ E +V +
Subjt: LNLTPFARNKIAELSSTKVHLEVFQETELMVNIKEHVLIPEHQTLTDEEKKTLLERYTVKETQLPRMQVTDPIARYYGLKRGHVVKIIRPSETAGRYVTY
Query: RYV
R V
Subjt: RYV
|
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| AT5G57980.1 RNA polymerase II fifth largest subunit, C | 3.6e-45 | 46.38 | Show/hide |
Query: EEEITKLFRVRKTVLQMLKDRGYFVGDFELDMSKAQFKNKFGESM---KREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVETYVG-RMKSENVARAIF
++EIT++F+VR+TVLQML+DRGY + + +L++ + +F +F ++M +E L ++ +K N +D+IYVF+PE PKVG+ +++ V +M+ + V R I
Subjt: EEEITKLFRVRKTVLQMLKDRGYFVGDFELDMSKAQFKNKFGESM---KREDLVINKSKRNNSSDQIYVFFPEEPKVGIKIVETYVG-RMKSENVARAIF
Query: VVQLNLTPFARNKIAELSSTKVHLEVFQETELMVNIKEHVLIPEHQTLTDEEKKTLLERYTVKETQLPRMQVTDPIARYYGLKRGHVVKIIRPSETAGRY
VV + +T AR ++EL+ + +EVF+E EL+ NI EH L+ ++ L D+ KK LL YTV++TQLPR+ VTDP+ARYYGLKRG VVKI R T+ Y
Subjt: VVQLNLTPFARNKIAELSSTKVHLEVFQETELMVNIKEHVLIPEHQTLTDEEKKTLLERYTVKETQLPRMQVTDPIARYYGLKRGHVVKIIRPSETAGRY
Query: VTYRYVV
TYR+ V
Subjt: VTYRYVV
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