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PI0013706 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013706
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionDynein light chain
Genome locationchr06:5128344..5131394
RNA-Seq ExpressionPI0013706
SyntenyPI0013706
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001372 - Dynein light chain, type 1/2
IPR019763 - Dynein light chain, type 1/2, conserved site
IPR037177 - Dynein light chain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134221.1 dynein light chain 1, cytoplasmic [Cucumis sativus]2.5e-5695Show/hide
Query:  MNQDSHRTTNHPPPPMVKPESTDDRKPSSAASLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
        MNQDS R TNHPPPP+VK ESTDDRKPSS A LSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
Subjt:  MNQDSHRTTNHPPPPMVKPESTDDRKPSSAASLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE

Query:  TNHFVYFYLDQKAILLFKSG
        TNHFVYFYLDQKAILLFKSG
Subjt:  TNHFVYFYLDQKAILLFKSG

XP_016898981.1 PREDICTED: dynein light chain 1, cytoplasmic-like [Cucumis melo]4.0e-5491.67Show/hide
Query:  MNQDSHRTTNHPPPPMVKPESTDDRKPSSAASLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
        MN +S RTTNHPPP +VK ESTDDRKPSS + LSKKIVIKSADMFTDMQKEAID AIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
Subjt:  MNQDSHRTTNHPPPPMVKPESTDDRKPSSAASLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE

Query:  TNHFVYFYLDQKAILLFKSG
        TNHFVYFYLDQKAILLFKSG
Subjt:  TNHFVYFYLDQKAILLFKSG

XP_022945423.1 dynein light chain 1, cytoplasmic-like [Cucurbita moschata]2.3e-4682.5Show/hide
Query:  MNQDSHRTTNHPPPPMVKPESTDDRKPSSAASLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
        MN DS R  ++P P MVKPES +DRKPSSAA + KKIVIKSADMF DMQKEA+D AIAAFEKHSVEKD+AEQIKKEFDK HGPTWHC++GRNFGSYVTHE
Subjt:  MNQDSHRTTNHPPPPMVKPESTDDRKPSSAASLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE

Query:  TNHFVYFYLDQKAILLFKSG
        TNHFVYFYLDQKA+LLFKSG
Subjt:  TNHFVYFYLDQKAILLFKSG

XP_022973755.1 dynein light chain 1, cytoplasmic-like isoform X1 [Cucurbita maxima]1.5e-4581.67Show/hide
Query:  MNQDSHRTTNHPPPPMVKPESTDDRKPSSAASLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
        MN DS R+    P  MVKPES +DRKPSSAA + KKIVIKSADMF DMQKEA+D AIAAFEKHSVEKD+AEQIKKEFDK HGPTWHC++GRNFGSYVTHE
Subjt:  MNQDSHRTTNHPPPPMVKPESTDDRKPSSAASLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE

Query:  TNHFVYFYLDQKAILLFKSG
        TNHFVYFYLDQKA+LLFKSG
Subjt:  TNHFVYFYLDQKAILLFKSG

XP_038904701.1 dynein light chain 1, cytoplasmic-like [Benincasa hispida]7.0e-5190Show/hide
Query:  MNQDSHRTTNHPPPPMVKPESTDDRKPSSAASLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
        MNQ+SHR  ++PPP MVKPES DDRKPSSAA++SKKIVIKSADMF+DMQKEAID AIAAFEKHSVEKDIAEQIKK+FDKNHGPTWHCIVGRNFGSYVTHE
Subjt:  MNQDSHRTTNHPPPPMVKPESTDDRKPSSAASLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE

Query:  TNHFVYFYLDQKAILLFKSG
        TNHFVYFYLDQKAILLFKSG
Subjt:  TNHFVYFYLDQKAILLFKSG

TrEMBL top hitse value%identityAlignment
A0A0A0LAM1 Dynein light chain1.2e-5695Show/hide
Query:  MNQDSHRTTNHPPPPMVKPESTDDRKPSSAASLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
        MNQDS R TNHPPPP+VK ESTDDRKPSS A LSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
Subjt:  MNQDSHRTTNHPPPPMVKPESTDDRKPSSAASLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE

Query:  TNHFVYFYLDQKAILLFKSG
        TNHFVYFYLDQKAILLFKSG
Subjt:  TNHFVYFYLDQKAILLFKSG

A0A1S4DSP2 Dynein light chain1.9e-5491.67Show/hide
Query:  MNQDSHRTTNHPPPPMVKPESTDDRKPSSAASLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
        MN +S RTTNHPPP +VK ESTDDRKPSS + LSKKIVIKSADMFTDMQKEAID AIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
Subjt:  MNQDSHRTTNHPPPPMVKPESTDDRKPSSAASLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE

Query:  TNHFVYFYLDQKAILLFKSG
        TNHFVYFYLDQKAILLFKSG
Subjt:  TNHFVYFYLDQKAILLFKSG

A0A6J1C8U0 Dynein light chain8.1e-4580Show/hide
Query:  MNQDSHRTTNHPPPPMVKPESTDDRKPSSAASLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
        MNQD+ RT  +P   MVKPES +DRKPSSA  L++K+VIKSADMF DMQKEA+D AIAAFEK++VEKD+AEQIK+EFDK HGPTWHCIVGRNFGSYVTHE
Subjt:  MNQDSHRTTNHPPPPMVKPESTDDRKPSSAASLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE

Query:  TNHFVYFYLDQKAILLFKSG
        TNHFVYFYLDQKA+LLFKSG
Subjt:  TNHFVYFYLDQKAILLFKSG

A0A6J1G0U9 Dynein light chain1.1e-4682.5Show/hide
Query:  MNQDSHRTTNHPPPPMVKPESTDDRKPSSAASLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
        MN DS R  ++P P MVKPES +DRKPSSAA + KKIVIKSADMF DMQKEA+D AIAAFEKHSVEKD+AEQIKKEFDK HGPTWHC++GRNFGSYVTHE
Subjt:  MNQDSHRTTNHPPPPMVKPESTDDRKPSSAASLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE

Query:  TNHFVYFYLDQKAILLFKSG
        TNHFVYFYLDQKA+LLFKSG
Subjt:  TNHFVYFYLDQKAILLFKSG

A0A6J1IC60 Dynein light chain7.3e-4681.67Show/hide
Query:  MNQDSHRTTNHPPPPMVKPESTDDRKPSSAASLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
        MN DS R+    P  MVKPES +DRKPSSAA + KKIVIKSADMF DMQKEA+D AIAAFEKHSVEKD+AEQIKKEFDK HGPTWHC++GRNFGSYVTHE
Subjt:  MNQDSHRTTNHPPPPMVKPESTDDRKPSSAASLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE

Query:  TNHFVYFYLDQKAILLFKSG
        TNHFVYFYLDQKA+LLFKSG
Subjt:  TNHFVYFYLDQKAILLFKSG

SwissProt top hitse value%identityAlignment
Q22799 Dynein light chain 1, cytoplasmic1.1e-3071.59Show/hide
Query:  LSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG
        + +K VIK+ADM  DMQ++AID A  A EK+++EKDIA  IKKEFDK + PTWHCIVGRNFGSYVTHET HF+YFYL Q AILLFKSG
Subjt:  LSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG

Q39580 Dynein 8 kDa light chain, flagellar outer arm8.4e-3171.11Show/hide
Query:  ASLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG
        AS S K VIK+ADM  +MQ +A+D A  A EK+++EKDIA  IKKEFD+ H PTWHCIVGRNFGSYVTHET HF+YFYL Q AILLFKSG
Subjt:  ASLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG

Q3MHR3 Dynein light chain 2, cytoplasmic1.4e-3072.09Show/hide
Query:  KKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG
        +K VIK+ADM  DMQ++A+D A  A EK+++EKDIA  IKKEFDK + PTWHCIVGRNFGSYVTHET HF+YFYL Q AILLFKSG
Subjt:  KKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG

Q96FJ2 Dynein light chain 2, cytoplasmic1.4e-3072.09Show/hide
Query:  KKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG
        +K VIK+ADM  DMQ++A+D A  A EK+++EKDIA  IKKEFDK + PTWHCIVGRNFGSYVTHET HF+YFYL Q AILLFKSG
Subjt:  KKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG

Q9D0M5 Dynein light chain 2, cytoplasmic1.4e-3072.09Show/hide
Query:  KKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG
        +K VIK+ADM  DMQ++A+D A  A EK+++EKDIA  IKKEFDK + PTWHCIVGRNFGSYVTHET HF+YFYL Q AILLFKSG
Subjt:  KKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG

Arabidopsis top hitse value%identityAlignment
AT1G23220.1 Dynein light chain type 1 family protein2.1e-1341.67Show/hide
Query:  IKSADMFTDMQKEAIDTA---IAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKS
        ++++DM    Q  A   +   + A    +  K +A  +KK+FD  +GP WHCIVG +FGSYVTH T  F+YF +D+  +LLFK+
Subjt:  IKSADMFTDMQKEAIDTA---IAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKS

AT1G52240.2 RHO guanyl-nucleotide exchange factor 116.9e-1240.91Show/hide
Query:  LSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVE--KDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFK
        L  K +++ +DM   MQ +A+  A  A +   V   K IA  IKKEFD+ +G  W C+VG NFG + TH    F+YF L+    L+FK
Subjt:  LSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVE--KDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFK

AT4G15930.1 Dynein light chain type 1 family protein4.3e-3875.73Show/hide
Query:  DDRKPS-----SAASLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLF
        DDR+ S     ++    K+ VIKSADM  DMQKEAI+ AI+AFEK+SVEKDIAE IKKEFDK HG TWHCIVGRNFGSYVTHETNHFVYFYLDQKA+LLF
Subjt:  DDRKPS-----SAASLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLF

Query:  KSG
        KSG
Subjt:  KSG

AT4G27360.1 Dynein light chain type 1 family protein2.0e-1142.05Show/hide
Query:  LSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEK--DIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFK
        L  K V+   DM   M+++A+  A  A +   V +   IA  IKKEFD+++G  W CIVG +FGS+VTH +  F++F +    ILLFK
Subjt:  LSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEK--DIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFK

AT5G20110.1 Dynein light chain type 1 family protein8.7e-1547.31Show/hide
Query:  AASLSKKIVIKSADMFTDMQKEAIDTA---IAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKS
        AA+    + I +ADM   MQ  A   A   + + EK S  K +A  +KKEFDK +GP WHCIVG +FGS+VTH T  F+YF +D+  +LLFK+
Subjt:  AASLSKKIVIKSADMFTDMQKEAIDTA---IAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCAAGATTCTCACCGCACCACCAATCATCCTCCGCCTCCAATGGTGAAGCCTGAATCTACAGATGATCGCAAACCCTCATCTGCCGCTTCCCTCTCCAAGAAAAT
CGTCATCAAGAGCGCCGATATGTTCACCGACATGCAGAAGGAAGCTATTGACACTGCCATAGCCGCATTTGAGAAGCATTCCGTTGAGAAGGATATTGCCGAACAGATAA
AGAAAGAGTTTGATAAGAATCATGGACCCACCTGGCATTGCATCGTCGGTCGTAATTTTGGTTCTTACGTGACACACGAAACAAACCATTTTGTTTACTTCTACCTTGAT
CAGAAAGCAATTCTACTTTTCAAATCTGGTTGA
mRNA sequenceShow/hide mRNA sequence
TCTTCTTCTTCTTCTTCTTCTTCATCTCTCACCACCAAAACCAAACAATATTCTCTCCCAAAACTCCATCAAAGTCATGAACCAAGATTCTCACCGCACCACCAATCATC
CTCCGCCTCCAATGGTGAAGCCTGAATCTACAGATGATCGCAAACCCTCATCTGCCGCTTCCCTCTCCAAGAAAATCGTCATCAAGAGCGCCGATATGTTCACCGACATG
CAGAAGGAAGCTATTGACACTGCCATAGCCGCATTTGAGAAGCATTCCGTTGAGAAGGATATTGCCGAACAGATAAAGAAAGAGTTTGATAAGAATCATGGACCCACCTG
GCATTGCATCGTCGGTCGTAATTTTGGTTCTTACGTGACACACGAAACAAACCATTTTGTTTACTTCTACCTTGATCAGAAAGCAATTCTACTTTTCAAATCTGGTTGAG
GATTATTGTCCCCTTGAAAAAGATGCCACCAGCTACTATGGCCAGCTTGCGATAATGATGCTACTACAACTATTTCTTGTATGTATAATCTAGTCTGCCAGTGTATGTAA
GTAAATCACCTGGTGTAGCATTTTCTATATTATAATAATAATAATTATATATATATATCACTGGGGGAGTAGATTAAATGGTGAAACAAGAAGTTCAATATGCCATACAC
ATAATGTCTAAAAAAAGGGCCTCTTTGTCAATATCATTAAAACAAAAGGGTGCAGTAAAAGCTTCAAAAAGAAAAAGAAAATGCTTTGTCATTGGCTAAACGGTCAATGT
CGCTTGAAATTTTGTCATTACTTCTTGATGGATGAGTTTATGTTGGTTTTTCTTTTGTGGTTCAATTTTCAAATACTGCCTTGGAAGTTGATTTGGTTTAGAAGAGTAAA
TGCACTGGTGGAGTAGAACAAGTACAATACAAAGATAGGGTTGTAGTAAAAAGGGGTAAAGCAGACTGGAATTTTGAAATAAGAAAGAATTTTTGTACCGTTGCTGAATA
AAGGAAGGAGTTAAAGGTGATGAGTATCTTTAGTAGTAGAGAAATGAGATTTTGCAGCATATTTTTGTGTTGATTTGATTTATTACTCTTCATCATTTCTTTTTATTTCA
TGTAATGGTTTGCTCTTTTACACAGCTTAGCAGCACCCTACCCTCAACTTTCTTAGGCAGGGAGGAACTTTGGGGCCTTTGTTCTTGAAAATTATGGTTGAGTCATGAGT
GTGTTGTAATATTAAGGATTTGTAGTCTTAAATTTTGTTTTATATTCACTTTTGCTTAATTTGGTG
Protein sequenceShow/hide protein sequence
MNQDSHRTTNHPPPPMVKPESTDDRKPSSAASLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLD
QKAILLFKSG