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PI0013733 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013733
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr05:20123278..20124638
RNA-Seq ExpressionPI0013733
SyntenyPI0013733
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025972.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.1e-7774.76Show/hide
Query:  IATGASIQQFDQDMTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLHICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVY
        +A G  IQQFD D+TQEYIH Y NITRLYIT+ GA     RSNN RLRDVADD QQVL ICNNN+R+MEEIH MY +PIVPP ++RGRV+VEE ELDEVY
Subjt:  IATGASIQQFDQDMTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLHICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVY

Query:  HNVEEIPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSGVGPSSSYMDVRPSTSYMHGHGHGRGRGEHNEYLYYEAPTDVPDPQEYQQEPDNQE
        HNVEE+ P TQ Q+QTGYGSPM+MMP FG GYCD EV T Y DSGVGPSSSYMDV PSTSYMHGH H    GEHNEYLY+EAPT+V D QEYQQEP+NQE
Subjt:  HNVEEIPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSGVGPSSSYMDVRPSTSYMHGHGHGRGRGEHNEYLYYEAPTDVPDPQEYQQEPDNQE

Query:  ELGQPRVQSR
        EL Q RVQSR
Subjt:  ELGQPRVQSR

KAA0038951.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]4.1e-7782.86Show/hide
Query:  GASIQQFDQDMTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLHICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNV
        G SIQQFD D+TQEYIHWYNNITRLYITRP AAVGHLRSNN RLRDVADDPQQVL+ICNNN+RYMEEIH MYD+ IVPPPV+RGRVRVEE ELDEVYHNV
Subjt:  GASIQQFDQDMTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLHICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNV

Query:  EEIPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSGVGPSSSYMDVRPSTSYMHGHGHGRGRGEHNEYL
        EE+PP TQTQSQTGYGSPM MMP FGAGY DSEVGTGY D+G+ PSS YMDV PS  YM  HGH RG GEHN+YL
Subjt:  EEIPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSGVGPSSSYMDVRPSTSYMHGHGHGRGRGEHNEYL

KAA0062642.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.5e-9580.53Show/hide
Query:  IATGASIQQFDQDMTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLHICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVY
        +A   SIQQFD+D+TQEYIHWY+NITRLYITRPGAAVG  RSNN RLRDVADD QQ L ICNNNERYMEEIH MYD+PIVPPPV+RG VRVEE ELD+VY
Subjt:  IATGASIQQFDQDMTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLHICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVY

Query:  HNVEEIPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSGVGPSSSYMDVRPSTSYMHGHGHGRGRGEHNEYLYYEAPTDVPDPQEYQQEPDNQE
        HNVEE+P  TQTQSQTGYGSPM MMP F AGYCD EVG GY D+GVGPSSSY+DV PSTSYM  HGH RG GEHNEYLY+EAP DV D QEYQQEP+NQE
Subjt:  HNVEEIPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSGVGPSSSYMDVRPSTSYMHGHGHGRGRGEHNEYLYYEAPTDVPDPQEYQQEPDNQE

Query:  ELGQPRVQSRRRQPTRNRRRPGCGTH
        +  Q RVQSRRRQPTRNRRRPGCGTH
Subjt:  ELGQPRVQSRRRQPTRNRRRPGCGTH

TYK11193.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]4.8e-7883.43Show/hide
Query:  GASIQQFDQDMTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLHICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNV
        G SIQQFD D+TQEYIHWYNNITRLYITRPGAAVGHLRSNN RLRDVADDPQQVL+ICNNN+RYMEEIH MYD+ IVPPPV+RGRVRVEE ELDEVYHNV
Subjt:  GASIQQFDQDMTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLHICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNV

Query:  EEIPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSGVGPSSSYMDVRPSTSYMHGHGHGRGRGEHNEYL
        EE+PP TQTQSQTGYGSPM MMP FGAGY DSEVGTGY D+G+ PSS YMDV PS  YM  HGH RG GEHN+YL
Subjt:  EEIPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSGVGPSSSYMDVRPSTSYMHGHGHGRGRGEHNEYL

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.5e-9579.04Show/hide
Query:  RRFIATGASIQQFDQDMTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLHICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELD
        RRF+    SIQQFD D+TQEYIH YNNITRLYITRPGA VGHLRSNN RLRDV +DPQQVL ICNNNERYME+IH +YD+PIVPPPV+R R RVEE ELD
Subjt:  RRFIATGASIQQFDQDMTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLHICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELD

Query:  EVYHNVEEIPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSGVGPSSSYMDVRPSTSYMHGHGHGRGRGEHNEYLYYEAPTDVPDPQEYQQEPD
        EVYHNVEE+PP TQTQSQTGYGSPM MMP FGAGYCDSEV  GY D+ VGP SSYMDV PSTSYM  +GHGRG GEHNEYLY+EAPTDV D QEYQQEP 
Subjt:  EVYHNVEEIPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSGVGPSSSYMDVRPSTSYMHGHGHGRGRGEHNEYLYYEAPTDVPDPQEYQQEPD

Query:  NQEELGQPRVQSRRRQPTRNRRRPGCGTH
        NQE+  Q RVQSRRRQP RNR+  GCGTH
Subjt:  NQEELGQPRVQSRRRQPTRNRRRPGCGTH

TrEMBL top hitse value%identityAlignment
A0A5A7SLF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.5e-7774.76Show/hide
Query:  IATGASIQQFDQDMTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLHICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVY
        +A G  IQQFD D+TQEYIH Y NITRLYIT+ GA     RSNN RLRDVADD QQVL ICNNN+R+MEEIH MY +PIVPP ++RGRV+VEE ELDEVY
Subjt:  IATGASIQQFDQDMTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLHICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVY

Query:  HNVEEIPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSGVGPSSSYMDVRPSTSYMHGHGHGRGRGEHNEYLYYEAPTDVPDPQEYQQEPDNQE
        HNVEE+ P TQ Q+QTGYGSPM+MMP FG GYCD EV T Y DSGVGPSSSYMDV PSTSYMHGH H    GEHNEYLY+EAPT+V D QEYQQEP+NQE
Subjt:  HNVEEIPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSGVGPSSSYMDVRPSTSYMHGHGHGRGRGEHNEYLYYEAPTDVPDPQEYQQEPDNQE

Query:  ELGQPRVQSR
        EL Q RVQSR
Subjt:  ELGQPRVQSR

A0A5A7TBF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.0e-7782.86Show/hide
Query:  GASIQQFDQDMTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLHICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNV
        G SIQQFD D+TQEYIHWYNNITRLYITRP AAVGHLRSNN RLRDVADDPQQVL+ICNNN+RYMEEIH MYD+ IVPPPV+RGRVRVEE ELDEVYHNV
Subjt:  GASIQQFDQDMTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLHICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNV

Query:  EEIPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSGVGPSSSYMDVRPSTSYMHGHGHGRGRGEHNEYL
        EE+PP TQTQSQTGYGSPM MMP FGAGY DSEVGTGY D+G+ PSS YMDV PS  YM  HGH RG GEHN+YL
Subjt:  EEIPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSGVGPSSSYMDVRPSTSYMHGHGHGRGRGEHNEYL

A0A5A7V342 Mediator of RNA polymerase II transcription subunit 12-like isoform X17.2e-9680.53Show/hide
Query:  IATGASIQQFDQDMTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLHICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVY
        +A   SIQQFD+D+TQEYIHWY+NITRLYITRPGAAVG  RSNN RLRDVADD QQ L ICNNNERYMEEIH MYD+PIVPPPV+RG VRVEE ELD+VY
Subjt:  IATGASIQQFDQDMTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLHICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVY

Query:  HNVEEIPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSGVGPSSSYMDVRPSTSYMHGHGHGRGRGEHNEYLYYEAPTDVPDPQEYQQEPDNQE
        HNVEE+P  TQTQSQTGYGSPM MMP F AGYCD EVG GY D+GVGPSSSY+DV PSTSYM  HGH RG GEHNEYLY+EAP DV D QEYQQEP+NQE
Subjt:  HNVEEIPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSGVGPSSSYMDVRPSTSYMHGHGHGRGRGEHNEYLYYEAPTDVPDPQEYQQEPDNQE

Query:  ELGQPRVQSRRRQPTRNRRRPGCGTH
        +  Q RVQSRRRQPTRNRRRPGCGTH
Subjt:  ELGQPRVQSRRRQPTRNRRRPGCGTH

A0A5D3CH23 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.3e-7883.43Show/hide
Query:  GASIQQFDQDMTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLHICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNV
        G SIQQFD D+TQEYIHWYNNITRLYITRPGAAVGHLRSNN RLRDVADDPQQVL+ICNNN+RYMEEIH MYD+ IVPPPV+RGRVRVEE ELDEVYHNV
Subjt:  GASIQQFDQDMTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLHICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNV

Query:  EEIPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSGVGPSSSYMDVRPSTSYMHGHGHGRGRGEHNEYL
        EE+PP TQTQSQTGYGSPM MMP FGAGY DSEVGTGY D+G+ PSS YMDV PS  YM  HGH RG GEHN+YL
Subjt:  EEIPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSGVGPSSSYMDVRPSTSYMHGHGHGRGRGEHNEYL

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein7.2e-9679.04Show/hide
Query:  RRFIATGASIQQFDQDMTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLHICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELD
        RRF+    SIQQFD D+TQEYIH YNNITRLYITRPGA VGHLRSNN RLRDV +DPQQVL ICNNNERYME+IH +YD+PIVPPPV+R R RVEE ELD
Subjt:  RRFIATGASIQQFDQDMTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLHICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELD

Query:  EVYHNVEEIPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSGVGPSSSYMDVRPSTSYMHGHGHGRGRGEHNEYLYYEAPTDVPDPQEYQQEPD
        EVYHNVEE+PP TQTQSQTGYGSPM MMP FGAGYCDSEV  GY D+ VGP SSYMDV PSTSYM  +GHGRG GEHNEYLY+EAPTDV D QEYQQEP 
Subjt:  EVYHNVEEIPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSGVGPSSSYMDVRPSTSYMHGHGHGRGRGEHNEYLYYEAPTDVPDPQEYQQEPD

Query:  NQEELGQPRVQSRRRQPTRNRRRPGCGTH
        NQE+  Q RVQSRRRQP RNR+  GCGTH
Subjt:  NQEELGQPRVQSRRRQPTRNRRRPGCGTH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCACAACTAAGACATGCAAACGATCATCTACTACCTGGACGAGCACACGGTTCACGAAGATTCATTGCCACTGGAGCTTCGATTCAACAATTTGATCAGGATAT
GACTCAAGAATACATCCACTGGTATAATAATATTACGAGGCTCTACATCACTCGACCAGGAGCAGCTGTGGGTCATCTGAGATCGAACAACAGAAGACTTCGTGATGTTG
CAGATGATCCGCAACAAGTCCTTCATATATGTAATAATAATGAGAGGTACATGGAGGAGATACATTATATGTACGATGTACCTATTGTACCTCCACCAGTTAACAGGGGA
CGTGTTCGAGTGGAAGAACCTGAACTCGATGAAGTTTACCATAACGTAGAAGAAATACCTCCAGTGACACAAACACAGAGCCAAACTGGTTATGGTAGCCCGATGATGAT
GATGCCAGCTTTTGGAGCAGGATATTGTGATTCTGAGGTCGGTACAGGATATAATGACTCAGGGGTTGGTCCATCGTCTTCATACATGGATGTCAGACCATCAACTTCTT
ACATGCATGGACATGGACACGGACGCGGCCGCGGAGAACATAACGAATATCTGTACTATGAAGCACCTACAGACGTTCCAGATCCACAAGAGTACCAACAAGAACCAGAT
AATCAAGAGGAGCTAGGGCAACCAAGAGTTCAGAGTCGACGACGACAACCAACCCGAAATCGACGACGTCCGGGTTGTGGAACACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCACAACTAAGACATGCAAACGATCATCTACTACCTGGACGAGCACACGGTTCACGAAGATTCATTGCCACTGGAGCTTCGATTCAACAATTTGATCAGGATAT
GACTCAAGAATACATCCACTGGTATAATAATATTACGAGGCTCTACATCACTCGACCAGGAGCAGCTGTGGGTCATCTGAGATCGAACAACAGAAGACTTCGTGATGTTG
CAGATGATCCGCAACAAGTCCTTCATATATGTAATAATAATGAGAGGTACATGGAGGAGATACATTATATGTACGATGTACCTATTGTACCTCCACCAGTTAACAGGGGA
CGTGTTCGAGTGGAAGAACCTGAACTCGATGAAGTTTACCATAACGTAGAAGAAATACCTCCAGTGACACAAACACAGAGCCAAACTGGTTATGGTAGCCCGATGATGAT
GATGCCAGCTTTTGGAGCAGGATATTGTGATTCTGAGGTCGGTACAGGATATAATGACTCAGGGGTTGGTCCATCGTCTTCATACATGGATGTCAGACCATCAACTTCTT
ACATGCATGGACATGGACACGGACGCGGCCGCGGAGAACATAACGAATATCTGTACTATGAAGCACCTACAGACGTTCCAGATCCACAAGAGTACCAACAAGAACCAGAT
AATCAAGAGGAGCTAGGGCAACCAAGAGTTCAGAGTCGACGACGACAACCAACCCGAAATCGACGACGTCCGGGTTGTGGAACACATTGA
Protein sequenceShow/hide protein sequence
MAPQLRHANDHLLPGRAHGSRRFIATGASIQQFDQDMTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLHICNNNERYMEEIHYMYDVPIVPPPVNRG
RVRVEEPELDEVYHNVEEIPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSGVGPSSSYMDVRPSTSYMHGHGHGRGRGEHNEYLYYEAPTDVPDPQEYQQEPD
NQEELGQPRVQSRRRQPTRNRRRPGCGTH