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PI0013766 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013766
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr01:19079771..19079983
RNA-Seq ExpressionPI0013766
SyntenyPI0013766
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003723 - RNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041225.1 uncharacterized protein E6C27_scaffold128G001860 [Cucumis melo var. makuwa]3.2e-1155.88Show/hide
Query:  MAQQQLEERMTSTEKEIVDLKEILLGLKMSIDRLAKDMKENSYTRKKEESGTSNTSVLKLKGKVEDVD
        MAQ+Q+EER+  TEKE++ LKE++L +K S+DRLA +++EN   +KKEESGTS+ S++K+KGK+E+ D
Subjt:  MAQQQLEERMTSTEKEIVDLKEILLGLKMSIDRLAKDMKENSYTRKKEESGTSNTSVLKLKGKVEDVD

KAA0056659.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]1.2e-1055.88Show/hide
Query:  MAQQQLEERMTSTEKEIVDLKEILLGLKMSIDRLAKDMKENSYTRKKEESGTSNTSVLKLKGKVEDVD
        MAQ+Q+EER+  TEKE++ LKE++L +K S+DRLA ++++ SY +KKEESGTS+ S++K+KGK+E+ D
Subjt:  MAQQQLEERMTSTEKEIVDLKEILLGLKMSIDRLAKDMKENSYTRKKEESGTSNTSVLKLKGKVEDVD

KAA0063363.1 retrotransposon protein [Cucumis melo var. makuwa]2.2e-1258.82Show/hide
Query:  MAQQQLEERMTSTEKEIVDLKEILLGLKMSIDRLAKDMKENSYTRKKEESGTSNTSVLKLKGKVEDVD
        MAQQQ+EER+  TEKE++ LKE++L +K S+DRLA +++EN   +KKEESGTSN S++K+KGK+E+ D
Subjt:  MAQQQLEERMTSTEKEIVDLKEILLGLKMSIDRLAKDMKENSYTRKKEESGTSNTSVLKLKGKVEDVD

KAA0063772.1 retrotransposon protein [Cucumis melo var. makuwa]7.1e-1157.35Show/hide
Query:  MAQQQLEERMTSTEKEIVDLKEILLGLKMSIDRLAKDMKENSYTRKKEESGTSNTSVLKLKGKVEDVD
        MAQ+Q+EER+  TEKEI+ LKE++L +K +++RLA +MKE+   +KKEESGTSN SV+K+KGK+E+ +
Subjt:  MAQQQLEERMTSTEKEIVDLKEILLGLKMSIDRLAKDMKENSYTRKKEESGTSNTSVLKLKGKVEDVD

TYK16028.1 uncharacterized protein E5676_scaffold32G00230 [Cucumis melo var. makuwa]3.2e-1155.88Show/hide
Query:  MAQQQLEERMTSTEKEIVDLKEILLGLKMSIDRLAKDMKENSYTRKKEESGTSNTSVLKLKGKVEDVD
        MAQ+Q+EER+  TEKE++ LKE++L +K S+DRLA +++EN   +KKEESGTS+ S++K+KGK+E+ D
Subjt:  MAQQQLEERMTSTEKEIVDLKEILLGLKMSIDRLAKDMKENSYTRKKEESGTSNTSVLKLKGKVEDVD

TrEMBL top hitse value%identityAlignment
A0A5A7TII1 Uncharacterized protein1.5e-1155.88Show/hide
Query:  MAQQQLEERMTSTEKEIVDLKEILLGLKMSIDRLAKDMKENSYTRKKEESGTSNTSVLKLKGKVEDVD
        MAQ+Q+EER+  TEKE++ LKE++L +K S+DRLA +++EN   +KKEESGTS+ S++K+KGK+E+ D
Subjt:  MAQQQLEERMTSTEKEIVDLKEILLGLKMSIDRLAKDMKENSYTRKKEESGTSNTSVLKLKGKVEDVD

A0A5A7TYN3 Ty3/gypsy retrotransposon protein5.8e-1157.35Show/hide
Query:  MAQQQLEERMTSTEKEIVDLKEILLGLKMSIDRLAKDMKENSYTRKKEESGTSNTSVLKLKGKVEDVD
        MAQ+Q+EER+  TEKE++ LKE++L +K S+DRLA ++++ SY +KKEESGTS+ SV+K+KGK+E+ D
Subjt:  MAQQQLEERMTSTEKEIVDLKEILLGLKMSIDRLAKDMKENSYTRKKEESGTSNTSVLKLKGKVEDVD

A0A5A7V689 Retrotransposon protein3.4e-1157.35Show/hide
Query:  MAQQQLEERMTSTEKEIVDLKEILLGLKMSIDRLAKDMKENSYTRKKEESGTSNTSVLKLKGKVEDVD
        MAQ+Q+EER+  TEKEI+ LKE++L +K +++RLA +MKE+   +KKEESGTSN SV+K+KGK+E+ +
Subjt:  MAQQQLEERMTSTEKEIVDLKEILLGLKMSIDRLAKDMKENSYTRKKEESGTSNTSVLKLKGKVEDVD

A0A5D3CXP0 Uncharacterized protein1.5e-1155.88Show/hide
Query:  MAQQQLEERMTSTEKEIVDLKEILLGLKMSIDRLAKDMKENSYTRKKEESGTSNTSVLKLKGKVEDVD
        MAQ+Q+EER+  TEKE++ LKE++L +K S+DRLA +++EN   +KKEESGTS+ S++K+KGK+E+ D
Subjt:  MAQQQLEERMTSTEKEIVDLKEILLGLKMSIDRLAKDMKENSYTRKKEESGTSNTSVLKLKGKVEDVD

A0A5D3DXK6 Retrotransposon protein1.1e-1258.82Show/hide
Query:  MAQQQLEERMTSTEKEIVDLKEILLGLKMSIDRLAKDMKENSYTRKKEESGTSNTSVLKLKGKVEDVD
        MAQQQ+EER+  TEKE++ LKE++L +K S+DRLA +++EN   +KKEESGTSN S++K+KGK+E+ D
Subjt:  MAQQQLEERMTSTEKEIVDLKEILLGLKMSIDRLAKDMKENSYTRKKEESGTSNTSVLKLKGKVEDVD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACAACAACAACTAGAAGAAAGAATGACATCCACAGAGAAAGAGATAGTGGACTTGAAAGAGATACTGCTAGGATTGAAAATGAGCATTGACCGCCTTGCAAAAGA
CATGAAGGAAAATAGTTATACGCGGAAGAAGGAAGAATCAGGGACATCTAATACCTCTGTGCTGAAGCTGAAGGGGAAGGTAGAGGATGTGGATACTGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCACAACAACAACTAGAAGAAAGAATGACATCCACAGAGAAAGAGATAGTGGACTTGAAAGAGATACTGCTAGGATTGAAAATGAGCATTGACCGCCTTGCAAAAGA
CATGAAGGAAAATAGTTATACGCGGAAGAAGGAAGAATCAGGGACATCTAATACCTCTGTGCTGAAGCTGAAGGGGAAGGTAGAGGATGTGGATACTGCTTAA
Protein sequenceShow/hide protein sequence
MAQQQLEERMTSTEKEIVDLKEILLGLKMSIDRLAKDMKENSYTRKKEESGTSNTSVLKLKGKVEDVDTA