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PI0013769 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013769
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr12:19749291..19749902
RNA-Seq ExpressionPI0013769
SyntenyPI0013769
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034014.1 uncharacterized protein E6C27_scaffold400G00820 [Cucumis melo var. makuwa]4.1e-5979.47Show/hide
Query:  MVGLSLGVDISSNQIEIIYRHPNLTPSGSVSFIPFPISNEQAMNTMFSIALPFPNMVHLYVTVSRVDLGIDLNVKSRPVEEYVDVDPESDAEPVCVEEEI
        MVGLSLGVD+SS+QIEIIYRHPNLT SG+V FIPFPISNEQ MNTMFSIALPFPNMVHLYVTVS VD  I+LNV+ R VEEYVDV+PESDA PVC EEE+
Subjt:  MVGLSLGVDISSNQIEIIYRHPNLTPSGSVSFIPFPISNEQAMNTMFSIALPFPNMVHLYVTVSRVDLGIDLNVKSRPVEEYVDVDPESDAEPVCVEEEI

Query:  VANNDYRDFRTKTDDEFEEMEFDEREHEFPSNTFTDLDMNVVDSVREHDPI
        VA N+Y +FRT+TDDEFEEM+FD  E+E PSNTFTDLDMN VD+++EHDPI
Subjt:  VANNDYRDFRTKTDDEFEEMEFDEREHEFPSNTFTDLDMNVVDSVREHDPI

KAA0036768.1 uncharacterized protein E6C27_scaffold20G00510 [Cucumis melo var. makuwa]2.5e-5677.48Show/hide
Query:  MVGLSLGVDISSNQIEIIYRHPNLTPSGSVSFIPFPISNEQAMNTMFSIALPFPNMVHLYVTVSRVDLGIDLNVKSRPVEEYVDVDPESDAEPVCVEEEI
        MVGLSLGVD+SS+QIEIIYRHPNLT SG+V F+PFPISNEQ MNTMFSIAL FPNMVHLYVTVS VD  I+LNV+ R VEEYVDV+PESDA  VC EEE+
Subjt:  MVGLSLGVDISSNQIEIIYRHPNLTPSGSVSFIPFPISNEQAMNTMFSIALPFPNMVHLYVTVSRVDLGIDLNVKSRPVEEYVDVDPESDAEPVCVEEEI

Query:  VANNDYRDFRTKTDDEFEEMEFDEREHEFPSNTFTDLDMNVVDSVREHDPI
        VA N+Y +FRT+TDDEFEEM+FD  E+E PSNTFTDLDMN VD ++EHDPI
Subjt:  VANNDYRDFRTKTDDEFEEMEFDEREHEFPSNTFTDLDMNVVDSVREHDPI

KAA0040476.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.4e-5475.5Show/hide
Query:  MVGLSLGVDISSNQIEIIYRHPNLTPSGSVSFIPFPISNEQAMNTMFSIALPFPNMVHLYVTVSRVDLGIDLNVKSRPVEEYVDVDPESDAEPVCVEEEI
        MVGLSLGVD+SS+QIEIIYRH NLT SG+V F+PFPISNEQ MNTMFSI LPF NMVHLYVTVS VD  I+LNV+ R VEEYVDV+PES+A PVC EEE+
Subjt:  MVGLSLGVDISSNQIEIIYRHPNLTPSGSVSFIPFPISNEQAMNTMFSIALPFPNMVHLYVTVSRVDLGIDLNVKSRPVEEYVDVDPESDAEPVCVEEEI

Query:  VANNDYRDFRTKTDDEFEEMEFDEREHEFPSNTFTDLDMNVVDSVREHDPI
        VA N+Y +FRT+TDDEFEEM+FD  E+E PSN FTDLDMN VD ++EHDPI
Subjt:  VANNDYRDFRTKTDDEFEEMEFDEREHEFPSNTFTDLDMNVVDSVREHDPI

KAA0041167.1 uncharacterized protein E6C27_scaffold128G00980 [Cucumis melo var. makuwa]4.7e-6364.08Show/hide
Query:  MADKYVSFMLFTNGNMIDGVDGVDYDQPPCGNFSINANSGIVYEQFIQMVGLSLGVDISSNQIEIIYRHPNLTPSGSVSFIPFPISNEQAMNTMFSIALP
        MADK + FMLF NGNMIDG DG+DYDQP CG F+I+ NSGIV+EQFI++VG S+G+DI  + IEIIYRHP+LTPSG + F+PFPI NEQAM TMFSIA+P
Subjt:  MADKYVSFMLFTNGNMIDGVDGVDYDQPPCGNFSINANSGIVYEQFIQMVGLSLGVDISSNQIEIIYRHPNLTPSGSVSFIPFPISNEQAMNTMFSIALP

Query:  FPNMVHLYVTVSRVDLGIDLNVKS-RPVEEYVDV---DPESDAEPVCVEEEIVANNDYRDFRTKTD---DEFEEMEFDEREHEFPSNTFTDLDMNVVDSV
          NMVHLYV VSRV L I+LN KS   +E+   V   D E  A  V  +EE++ANND  DFRT+ D   DEFEE +FD REHE PSNT T +DM+V+DS+
Subjt:  FPNMVHLYVTVSRVDLGIDLNVKS-RPVEEYVDV---DPESDAEPVCVEEEIVANNDYRDFRTKTD---DEFEEMEFDEREHEFPSNTFTDLDMNVVDSV

Query:  REHDPI
        REHDPI
Subjt:  REHDPI

TYJ95836.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]2.0e-5878.81Show/hide
Query:  MVGLSLGVDISSNQIEIIYRHPNLTPSGSVSFIPFPISNEQAMNTMFSIALPFPNMVHLYVTVSRVDLGIDLNVKSRPVEEYVDVDPESDAEPVCVEEEI
        MVGLSLGVD+SS+QIEIIYRHPNLT SG+V F+PFPISNEQ MNTMFSIALPFPNMVHLYVTVS VD  I+LNV+ R VEEYVDV+PESDA PVC EEE+
Subjt:  MVGLSLGVDISSNQIEIIYRHPNLTPSGSVSFIPFPISNEQAMNTMFSIALPFPNMVHLYVTVSRVDLGIDLNVKSRPVEEYVDVDPESDAEPVCVEEEI

Query:  VANNDYRDFRTKTDDEFEEMEFDEREHEFPSNTFTDLDMNVVDSVREHDPI
        VA N+Y +FRT+TDDEFEEM+FD  E+E PSNTFTDLDMN VD ++EHDPI
Subjt:  VANNDYRDFRTKTDDEFEEMEFDEREHEFPSNTFTDLDMNVVDSVREHDPI

TrEMBL top hitse value%identityAlignment
A0A5A7SS31 DBD_Tnp_Mut domain-containing protein2.0e-5979.47Show/hide
Query:  MVGLSLGVDISSNQIEIIYRHPNLTPSGSVSFIPFPISNEQAMNTMFSIALPFPNMVHLYVTVSRVDLGIDLNVKSRPVEEYVDVDPESDAEPVCVEEEI
        MVGLSLGVD+SS+QIEIIYRHPNLT SG+V FIPFPISNEQ MNTMFSIALPFPNMVHLYVTVS VD  I+LNV+ R VEEYVDV+PESDA PVC EEE+
Subjt:  MVGLSLGVDISSNQIEIIYRHPNLTPSGSVSFIPFPISNEQAMNTMFSIALPFPNMVHLYVTVSRVDLGIDLNVKSRPVEEYVDVDPESDAEPVCVEEEI

Query:  VANNDYRDFRTKTDDEFEEMEFDEREHEFPSNTFTDLDMNVVDSVREHDPI
        VA N+Y +FRT+TDDEFEEM+FD  E+E PSNTFTDLDMN VD+++EHDPI
Subjt:  VANNDYRDFRTKTDDEFEEMEFDEREHEFPSNTFTDLDMNVVDSVREHDPI

A0A5A7T1X8 SWIM-type domain-containing protein1.2e-5677.48Show/hide
Query:  MVGLSLGVDISSNQIEIIYRHPNLTPSGSVSFIPFPISNEQAMNTMFSIALPFPNMVHLYVTVSRVDLGIDLNVKSRPVEEYVDVDPESDAEPVCVEEEI
        MVGLSLGVD+SS+QIEIIYRHPNLT SG+V F+PFPISNEQ MNTMFSIAL FPNMVHLYVTVS VD  I+LNV+ R VEEYVDV+PESDA  VC EEE+
Subjt:  MVGLSLGVDISSNQIEIIYRHPNLTPSGSVSFIPFPISNEQAMNTMFSIALPFPNMVHLYVTVSRVDLGIDLNVKSRPVEEYVDVDPESDAEPVCVEEEI

Query:  VANNDYRDFRTKTDDEFEEMEFDEREHEFPSNTFTDLDMNVVDSVREHDPI
        VA N+Y +FRT+TDDEFEEM+FD  E+E PSNTFTDLDMN VD ++EHDPI
Subjt:  VANNDYRDFRTKTDDEFEEMEFDEREHEFPSNTFTDLDMNVVDSVREHDPI

A0A5A7THR5 Uncharacterized protein2.3e-6364.08Show/hide
Query:  MADKYVSFMLFTNGNMIDGVDGVDYDQPPCGNFSINANSGIVYEQFIQMVGLSLGVDISSNQIEIIYRHPNLTPSGSVSFIPFPISNEQAMNTMFSIALP
        MADK + FMLF NGNMIDG DG+DYDQP CG F+I+ NSGIV+EQFI++VG S+G+DI  + IEIIYRHP+LTPSG + F+PFPI NEQAM TMFSIA+P
Subjt:  MADKYVSFMLFTNGNMIDGVDGVDYDQPPCGNFSINANSGIVYEQFIQMVGLSLGVDISSNQIEIIYRHPNLTPSGSVSFIPFPISNEQAMNTMFSIALP

Query:  FPNMVHLYVTVSRVDLGIDLNVKS-RPVEEYVDV---DPESDAEPVCVEEEIVANNDYRDFRTKTD---DEFEEMEFDEREHEFPSNTFTDLDMNVVDSV
          NMVHLYV VSRV L I+LN KS   +E+   V   D E  A  V  +EE++ANND  DFRT+ D   DEFEE +FD REHE PSNT T +DM+V+DS+
Subjt:  FPNMVHLYVTVSRVDLGIDLNVKS-RPVEEYVDV---DPESDAEPVCVEEEIVANNDYRDFRTKTD---DEFEEMEFDEREHEFPSNTFTDLDMNVVDSV

Query:  REHDPI
        REHDPI
Subjt:  REHDPI

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein9.8e-5978.81Show/hide
Query:  MVGLSLGVDISSNQIEIIYRHPNLTPSGSVSFIPFPISNEQAMNTMFSIALPFPNMVHLYVTVSRVDLGIDLNVKSRPVEEYVDVDPESDAEPVCVEEEI
        MVGLSLGVD+SS+QIEIIYRHPNLT SG+V F+PFPISNEQ MNTMFSIALPFPNMVHLYVTVS VD  I+LNV+ R VEEYVDV+PESDA PVC EEE+
Subjt:  MVGLSLGVDISSNQIEIIYRHPNLTPSGSVSFIPFPISNEQAMNTMFSIALPFPNMVHLYVTVSRVDLGIDLNVKSRPVEEYVDVDPESDAEPVCVEEEI

Query:  VANNDYRDFRTKTDDEFEEMEFDEREHEFPSNTFTDLDMNVVDSVREHDPI
        VA N+Y +FRT+TDDEFEEM+FD  E+E PSNTFTDLDMN VD ++EHDPI
Subjt:  VANNDYRDFRTKTDDEFEEMEFDEREHEFPSNTFTDLDMNVVDSVREHDPI

A0A5D3DIM2 Serine/threonine-protein phosphatase 7 long form-like protein6.6e-5575.5Show/hide
Query:  MVGLSLGVDISSNQIEIIYRHPNLTPSGSVSFIPFPISNEQAMNTMFSIALPFPNMVHLYVTVSRVDLGIDLNVKSRPVEEYVDVDPESDAEPVCVEEEI
        MVGLSLGVD+SS+QIEIIYRH NLT SG+V F+PFPISNEQ MNTMFSI LPF NMVHLYVTVS VD  I+LNV+ R VEEYVDV+PES+A PVC EEE+
Subjt:  MVGLSLGVDISSNQIEIIYRHPNLTPSGSVSFIPFPISNEQAMNTMFSIALPFPNMVHLYVTVSRVDLGIDLNVKSRPVEEYVDVDPESDAEPVCVEEEI

Query:  VANNDYRDFRTKTDDEFEEMEFDEREHEFPSNTFTDLDMNVVDSVREHDPI
        VA N+Y +FRT+TDDEFEEM+FD  E+E PSN FTDLDMN VD ++EHDPI
Subjt:  VANNDYRDFRTKTDDEFEEMEFDEREHEFPSNTFTDLDMNVVDSVREHDPI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGACAAATACGTGTCATTTATGTTGTTTACAAATGGCAATATGATTGACGGTGTCGATGGGGTTGATTATGATCAACCTCCATGTGGGAATTTTAGTATAAATGC
AAACAGTGGGATTGTTTATGAACAATTCATCCAAATGGTGGGGTTATCACTTGGTGTAGATATAAGTTCGAACCAAATAGAGATAATATATAGACACCCTAATTTAACCC
CATCTGGATCCGTAAGCTTTATACCATTCCCTATTTCGAATGAACAAGCAATGAACACCATGTTTTCAATTGCACTACCGTTTCCAAACATGGTGCATTTGTACGTGACT
GTGAGTAGGGTAGATTTGGGCATCGATTTAAATGTAAAATCACGACCAGTTGAAGAATATGTTGATGTTGATCCTGAGTCAGATGCAGAACCAGTGTGCGTTGAAGAAGA
AATAGTTGCTAATAACGACTATAGAGATTTTAGAACAAAAACTGATGATGAATTCGAAGAGATGGAATTTGATGAGCGTGAACATGAATTTCCCTCAAATACATTCACTG
ACCTGGACATGAATGTAGTAGATAGCGTTCGTGAGCACGATCCAATACAGTCCCAGTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGACAAATACGTGTCATTTATGTTGTTTACAAATGGCAATATGATTGACGGTGTCGATGGGGTTGATTATGATCAACCTCCATGTGGGAATTTTAGTATAAATGC
AAACAGTGGGATTGTTTATGAACAATTCATCCAAATGGTGGGGTTATCACTTGGTGTAGATATAAGTTCGAACCAAATAGAGATAATATATAGACACCCTAATTTAACCC
CATCTGGATCCGTAAGCTTTATACCATTCCCTATTTCGAATGAACAAGCAATGAACACCATGTTTTCAATTGCACTACCGTTTCCAAACATGGTGCATTTGTACGTGACT
GTGAGTAGGGTAGATTTGGGCATCGATTTAAATGTAAAATCACGACCAGTTGAAGAATATGTTGATGTTGATCCTGAGTCAGATGCAGAACCAGTGTGCGTTGAAGAAGA
AATAGTTGCTAATAACGACTATAGAGATTTTAGAACAAAAACTGATGATGAATTCGAAGAGATGGAATTTGATGAGCGTGAACATGAATTTCCCTCAAATACATTCACTG
ACCTGGACATGAATGTAGTAGATAGCGTTCGTGAGCACGATCCAATACAGTCCCAGTGGTGA
Protein sequenceShow/hide protein sequence
MADKYVSFMLFTNGNMIDGVDGVDYDQPPCGNFSINANSGIVYEQFIQMVGLSLGVDISSNQIEIIYRHPNLTPSGSVSFIPFPISNEQAMNTMFSIALPFPNMVHLYVT
VSRVDLGIDLNVKSRPVEEYVDVDPESDAEPVCVEEEIVANNDYRDFRTKTDDEFEEMEFDEREHEFPSNTFTDLDMNVVDSVREHDPIQSQW