CuGenDBv2

Gene ID	PI0013779
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	30S ribosomal protein S7, chloroplastic
Genome location	tig00003622:103675..103929
RNA-Seq Expression	PI0013779
Synteny	PI0013779
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0009507 - chloroplast (cellular component) GO:0015935 - small ribosomal subunit (cellular component) GO:0016020 - membrane (cellular component) GO:0003735 - structural constituent of ribosome (molecular function) GO:0019843 - rRNA binding (molecular function)
InterPro domains	IPR000235 - Ribosomal protein S5/S7 IPR023798 - Ribosomal protein S7 domain IPR036823 - Ribosomal protein S7 domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KZV39874.1 hypothetical protein F511_18678 [Dorcoceras hygrometricum]

2.9e-19

96.36

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Query:  MKKIQQKTERNPLSLLRQGIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI
        MKKIQQKTERNPLS+LRQ IRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI
Subjt:  MKKIQQKTERNPLSLLRQGIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI

QTT78339.1 ribosomal protein S7 [Strobilanthes biocullata]

2.9e-19

96.36

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Query:  MKKIQQKTERNPLSLLRQGIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI
        MKKIQQKTERNPLS+LRQ IRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI
Subjt:  MKKIQQKTERNPLSLLRQGIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI

YP_009478672.1 ribosomal protein S7 [Strobilanthes cusia]

2.9e-19

96.36

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Query:  MKKIQQKTERNPLSLLRQGIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI
        MKKIQQKTERNPLS+LRQ IRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI
Subjt:  MKKIQQKTERNPLSLLRQGIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI

YP_009646972.1 30S ribosomal protein S7 [Cephalotus follicularis]

3.8e-19

94.55

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Query:  MKKIQQKTERNPLSLLRQGIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI
        MKKIQQKTE NPLS+LRQGIRGVTPDIAVKARRVGGSTHQVP+EIGSTQGKALAI
Subjt:  MKKIQQKTERNPLSLLRQGIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI

YP_009826428.1 ribosomal protein S7 [Barleria prionitis]

2.9e-19

96.36

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Query:  MKKIQQKTERNPLSLLRQGIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI
        MKKIQQKTERNPLS+LRQ IRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI
Subjt:  MKKIQQKTERNPLSLLRQGIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI

TrEMBL top hits

e value

%identity

Alignment

A0A2H4NSB3 30S ribosomal protein S7, chloroplastic

1.4e-19

96.36

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Query:  MKKIQQKTERNPLSLLRQGIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI
        MKKIQQKTERNPLS+LRQ IRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI
Subjt:  MKKIQQKTERNPLSLLRQGIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI

A0A2P1N7I1 30S ribosomal protein S7, chloroplastic

1.4e-19

96.36

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Query:  MKKIQQKTERNPLSLLRQGIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI
        MKKIQQKTERNPLS+LRQ IRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI
Subjt:  MKKIQQKTERNPLSLLRQGIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI

A0A2Z7BZN3 Ribosomal protein S7

1.4e-19

96.36

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Query:  MKKIQQKTERNPLSLLRQGIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI
        MKKIQQKTERNPLS+LRQ IRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI
Subjt:  MKKIQQKTERNPLSLLRQGIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI

A0A4Y5QKB7 Ribosomal protein S7

1.8e-19

94.55

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Query:  MKKIQQKTERNPLSLLRQGIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI
        MKKIQQKTE NPLS+LRQGIRGVTPDIAVKARRVGGSTHQVP+EIGSTQGKALAI
Subjt:  MKKIQQKTERNPLSLLRQGIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI

A0A6M3FZU1 30S ribosomal protein S7, chloroplastic

1.4e-19

96.36

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Query:  MKKIQQKTERNPLSLLRQGIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI
        MKKIQQKTERNPLS+LRQ IRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI
Subjt:  MKKIQQKTERNPLSLLRQGIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI

SwissProt top hits

e value

%identity

Alignment

O63057 30S ribosomal protein S7, plastid

1.9e-21

94.55

Show/hide

Query:  MKKIQQKTERNPLSLLRQGIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI
        MKKIQQKTE NPLS+LRQ IRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI
Subjt:  MKKIQQKTERNPLSLLRQGIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI

Q49KT8 30S ribosomal protein S7, chloroplastic

1.9e-21

94.55

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Query:  MKKIQQKTERNPLSLLRQGIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI
        MKKIQQKTE NPLS+LRQ IRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI
Subjt:  MKKIQQKTERNPLSLLRQGIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI

Q4VZK9 30S ribosomal protein S7, chloroplastic

1.9e-21

94.55

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Query:  MKKIQQKTERNPLSLLRQGIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI
        MKKIQQKTE NPLS+LRQ IRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI
Subjt:  MKKIQQKTERNPLSLLRQGIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI

Q6EM99 30S ribosomal protein S7, chloroplastic

1.9e-21

94.55

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Query:  MKKIQQKTERNPLSLLRQGIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI
        MKKIQQKTE NPLS+LRQ IRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI
Subjt:  MKKIQQKTERNPLSLLRQGIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI

Q6KGY2 30S ribosomal protein S7, chloroplastic

1.9e-21

94.55

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Query:  MKKIQQKTERNPLSLLRQGIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI
        MKKIQQKTE NPLS+LRQ IRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI
Subjt:  MKKIQQKTERNPLSLLRQGIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI

Arabidopsis top hits

e value

%identity

Alignment

ATCG00900.1 Ribosomal protein S7p/S5e family protein

3.0e-22

92.73

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Query:  MKKIQQKTERNPLSLLRQGIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI
        +KKIQQKTE NPLS+LRQ IRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI
Subjt:  MKKIQQKTERNPLSLLRQGIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI

ATCG01240.1 ribosomal protein S7

3.0e-22

92.73

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Query:  MKKIQQKTERNPLSLLRQGIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI
        +KKIQQKTE NPLS+LRQ IRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI
Subjt:  MKKIQQKTERNPLSLLRQGIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAI

Sequences

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CDS sequence

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ATGAAAAAGATTCAACAAAAGACAGAAAGAAATCCACTATCTCTTTTACGTCAAGGAATACGTGGAGTAACTCCCGATATAGCAGTAAAGGCAAGACGTGTAGGCGGATC
AACTCATCAAGTTCCCATTGAAATAGGATCCACACAAGGAAAAGCACTTGCCATTCCGCTAGTTCCTACAAAGGATCGGACTAATGACGTATACAAGACTTTCATTCTCG
ATGTGAAAAGACAGAGACAAAAGGCTGATCTTTGA

mRNA sequence

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Protein sequence

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MKKIQQKTERNPLSLLRQGIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIPLVPTKDRTNDVYKTFILDVKRQRQKADL

PI0013779 (gene) of Melon (PI 482460) v1 genome