; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0013791 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013791
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol polyprotein
Genome locationchr07:19158299..19158535
RNA-Seq ExpressionPI0013791
SyntenyPI0013791
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0006810 - transport (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0016020 - membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
GO:0008233 - peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0022857 - transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAO73523.1 gag-pol polyprotein [Glycine max]2.4e-2061.73Show/hide
Query:  MMAFLKSIDNKTWKSVVTGWEHPS-VNTESKTT--LKLEIDWNDVEDQVSLGNSRALNAIYNGVDQNVFKLINTCTFAKEA
        M+AFLKS+D++TWK+V+ GWEHP  ++TE K T  LK E DW   ED+++LGNS+ALNA++NGVD+N+F+LINTCT AK+A
Subjt:  MMAFLKSIDNKTWKSVVTGWEHPS-VNTESKTT--LKLEIDWNDVEDQVSLGNSRALNAIYNGVDQNVFKLINTCTFAKEA

AAO73525.1 gag-pol polyprotein [Glycine max]2.4e-2061.73Show/hide
Query:  MMAFLKSIDNKTWKSVVTGWEHPS-VNTESKTT--LKLEIDWNDVEDQVSLGNSRALNAIYNGVDQNVFKLINTCTFAKEA
        M+AFLKS+D++TWK+V+ GWEHP  ++TE K T  LK E DW   ED+++LGNS+ALNA++NGVD+N+F+LINTCT AK+A
Subjt:  MMAFLKSIDNKTWKSVVTGWEHPS-VNTESKTT--LKLEIDWNDVEDQVSLGNSRALNAIYNGVDQNVFKLINTCTFAKEA

KAA0032368.1 gag-pol polyprotein [Cucumis melo var. makuwa]2.0e-2271.79Show/hide
Query:  MMAFLKSIDNKTWKSVVTGWEHPSVNTESKTTLKLEIDWNDVEDQVSLGNSRALNAIYNGVDQNVFKLINTCTFAKEA
        M AFLKSIDNKTWK+V++ WE P++  + K+T K E DW D EDQ SLGNSRALNAIYN  DQNVFKLINTCT AKEA
Subjt:  MMAFLKSIDNKTWKSVVTGWEHPSVNTESKTTLKLEIDWNDVEDQVSLGNSRALNAIYNGVDQNVFKLINTCTFAKEA

KAA0058905.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]2.4e-2064.56Show/hide
Query:  MMAFLKSIDNKTWKSVVTGWEHP-SVNTESKTTLKLEIDWNDVEDQVSLGNSRALNAIYNGVDQNVFKLINTCTFAKEA
        M+AFLKSIDNK+WK+VV G EHP  ++   K +LK E+ W+  ED+ +LGNSR LNA +NGVDQNVF+LINTCTF KEA
Subjt:  MMAFLKSIDNKTWKSVVTGWEHP-SVNTESKTTLKLEIDWNDVEDQVSLGNSRALNAIYNGVDQNVFKLINTCTFAKEA

XP_031740742.1 uncharacterized protein LOC116403561 [Cucumis sativus]8.4e-2165.38Show/hide
Query:  MMAFLKSIDNKTWKSVVTGWEHPSVNTESKTTLKLEIDWNDVEDQVSLGNSRALNAIYNGVDQNVFKLINTCTFAKEA
        M +FLKSID+++WK+V++GWE P +  E K+T K E DW D EDQ S GN+ ALNAIYNGVDQNVFKLI+TC+ AKEA
Subjt:  MMAFLKSIDNKTWKSVVTGWEHPSVNTESKTTLKLEIDWNDVEDQVSLGNSRALNAIYNGVDQNVFKLINTCTFAKEA

TrEMBL top hitse value%identityAlignment
A0A5A7SP99 Gag-pol polyprotein9.7e-2371.79Show/hide
Query:  MMAFLKSIDNKTWKSVVTGWEHPSVNTESKTTLKLEIDWNDVEDQVSLGNSRALNAIYNGVDQNVFKLINTCTFAKEA
        M AFLKSIDNKTWK+V++ WE P++  + K+T K E DW D EDQ SLGNSRALNAIYN  DQNVFKLINTCT AKEA
Subjt:  MMAFLKSIDNKTWKSVVTGWEHPSVNTESKTTLKLEIDWNDVEDQVSLGNSRALNAIYNGVDQNVFKLINTCTFAKEA

A0A5A7UZ92 Gag-proteinase polyprotein1.2e-2064.56Show/hide
Query:  MMAFLKSIDNKTWKSVVTGWEHP-SVNTESKTTLKLEIDWNDVEDQVSLGNSRALNAIYNGVDQNVFKLINTCTFAKEA
        M+AFLKSIDNK+WK+VV G EHP  ++   K +LK E+ W+  ED+ +LGNSR LNA +NGVDQNVF+LINTCTF KEA
Subjt:  MMAFLKSIDNKTWKSVVTGWEHP-SVNTESKTTLKLEIDWNDVEDQVSLGNSRALNAIYNGVDQNVFKLINTCTFAKEA

O65147 Gag-pol polyprotein1.2e-2061.73Show/hide
Query:  MMAFLKSIDNKTWKSVVTGWEHPS-VNTESKTT--LKLEIDWNDVEDQVSLGNSRALNAIYNGVDQNVFKLINTCTFAKEA
        M+AFLKS+D++TWK+V+ GWEHP  ++TE K T  LK E DW   ED+++LGNS+ALNA++NGVD+N+F+LINTCT AK+A
Subjt:  MMAFLKSIDNKTWKSVVTGWEHPS-VNTESKTT--LKLEIDWNDVEDQVSLGNSRALNAIYNGVDQNVFKLINTCTFAKEA

Q84VI0 Gag-pol polyprotein1.2e-2061.73Show/hide
Query:  MMAFLKSIDNKTWKSVVTGWEHPS-VNTESKTT--LKLEIDWNDVEDQVSLGNSRALNAIYNGVDQNVFKLINTCTFAKEA
        M+AFLKS+D++TWK+V+ GWEHP  ++TE K T  LK E DW   ED+++LGNS+ALNA++NGVD+N+F+LINTCT AK+A
Subjt:  MMAFLKSIDNKTWKSVVTGWEHPS-VNTESKTT--LKLEIDWNDVEDQVSLGNSRALNAIYNGVDQNVFKLINTCTFAKEA

Q84VI4 Gag-pol polyprotein1.2e-2061.73Show/hide
Query:  MMAFLKSIDNKTWKSVVTGWEHPS-VNTESKTT--LKLEIDWNDVEDQVSLGNSRALNAIYNGVDQNVFKLINTCTFAKEA
        M+AFLKS+D++TWK+V+ GWEHP  ++TE K T  LK E DW   ED+++LGNS+ALNA++NGVD+N+F+LINTCT AK+A
Subjt:  MMAFLKSIDNKTWKSVVTGWEHPS-VNTESKTT--LKLEIDWNDVEDQVSLGNSRALNAIYNGVDQNVFKLINTCTFAKEA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGCTTTTCTTAAATCAATTGATAATAAAACTTGGAAATCTGTGGTCACAGGTTGGGAACACCCCTCTGTCAATACTGAAAGTAAAACTACTCTTAAACTAGAAAT
AGATTGGAATGATGTTGAAGATCAAGTTTCTCTTGGTAATTCACGAGCTCTAAATGCAATCTATAATGGAGTTGATCAAAATGTGTTCAAATTGATAAATACTTGTACCT
TTGCTAAAGAAGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGGCTTTTCTTAAATCAATTGATAATAAAACTTGGAAATCTGTGGTCACAGGTTGGGAACACCCCTCTGTCAATACTGAAAGTAAAACTACTCTTAAACTAGAAAT
AGATTGGAATGATGTTGAAGATCAAGTTTCTCTTGGTAATTCACGAGCTCTAAATGCAATCTATAATGGAGTTGATCAAAATGTGTTCAAATTGATAAATACTTGTACCT
TTGCTAAAGAAGCTTGA
Protein sequenceShow/hide protein sequence
MMAFLKSIDNKTWKSVVTGWEHPSVNTESKTTLKLEIDWNDVEDQVSLGNSRALNAIYNGVDQNVFKLINTCTFAKEA