CuGenDBv2

Gene ID	PI0013798
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Rab5-interacting
Genome location	chr11:6694929..6697980
RNA-Seq Expression	PI0013798
Synteny	PI0013798
Gene Ontology terms	GO:0006996 - organelle organization (biological process) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR010742 - Rab5-interacting protein IPR029008 - Rab5-interacting protein family

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004143124.1 uncharacterized protein RAB5IF homolog [Cucumis sativus]

1.1e-65

98.45

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Query:  MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
        MKEAKPVKFNLHQHQDHQNGHLAPFKLAKL DPEASWDKDQLGDVLHWIRQAVAV+LGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWILVYSLAHF
        HGALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWILVYSLAHF

XP_008464121.1 PREDICTED: uncharacterized protein C20orf24 homolog [Cucumis melo]

8.3e-66

99.22

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Query:  MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
        MKEAKPVKFNLHQHQDHQNGHLAPFKLAKL DPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWILVYSLAHF
        HGALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWILVYSLAHF

XP_022947918.1 uncharacterized protein C20orf24 homolog isoform X2 [Cucurbita moschata]

4.1e-65

97.67

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Query:  MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
        MKEA PVKFNLHQHQ+HQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWG+IPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWILVYSLAHF
        HGALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWILVYSLAHF

XP_022986965.1 uncharacterized protein C20orf24 homolog [Cucurbita maxima]

3.2e-65

96.9

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Query:  MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
        MKE+KP+K NLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTS+VYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWILVYSLAHF
        HGALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWILVYSLAHF

XP_038900616.1 respirasome Complex Assembly Factor 1-like [Benincasa hispida]

3.7e-66

99.22

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Query:  MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
        MKE+KPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWILVYSLAHF
        HGALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWILVYSLAHF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KFE5 Uncharacterized protein

5.3e-66

98.45

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Query:  MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
        MKEAKPVKFNLHQHQDHQNGHLAPFKLAKL DPEASWDKDQLGDVLHWIRQAVAV+LGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWILVYSLAHF
        HGALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWILVYSLAHF

A0A1S4E4J0 uncharacterized protein C20orf24 homolog

4.0e-66

99.22

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Query:  MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
        MKEAKPVKFNLHQHQDHQNGHLAPFKLAKL DPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWILVYSLAHF
        HGALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWILVYSLAHF

A0A5D3DK85 Rab5-interacting

4.0e-66

99.22

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Query:  MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
        MKEAKPVKFNLHQHQDHQNGHLAPFKLAKL DPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWILVYSLAHF
        HGALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWILVYSLAHF

A0A6J1G7Y2 uncharacterized protein C20orf24 homolog isoform X2

2.0e-65

97.67

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Query:  MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
        MKEA PVKFNLHQHQ+HQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWG+IPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWILVYSLAHF
        HGALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWILVYSLAHF

A0A6J1JFH8 uncharacterized protein C20orf24 homolog

1.5e-65

96.9

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Query:  MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
        MKE+KP+K NLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTS+VYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWILVYSLAHF
        HGALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWILVYSLAHF

SwissProt top hits

e value

%identity

Alignment

Q9BUV8 Respirasome Complex Assembly Factor 1

3.1e-15

38.74

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Query:  NGHLAPFKLAKLFDPEASW-DKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL
        NG L     +K+   +A+W DKD+  DV++W RQ +AVVLG++WG +PL G +    F  I+  V+Y Y++  L++DEEE+GG   L +EG   S  LF+
Subjt:  NGHLAPFKLAKLFDPEASW-DKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL

Query:  LAWILVYSLAH
        +     ++  H
Subjt:  LAWILVYSLAH

Q9CQT9 Respirasome Complex Assembly Factor 1

3.0e-18

40.18

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Query:  NGHLAPFKLAKLFDPEASW-DKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL
        NG L     +K+   +A+W DKD+  DV++W RQ +A+VLG++WG +PL G +    F  I+  V+Y Y++  L++DEEE+GG   L +EG   S  LF+
Subjt:  NGHLAPFKLAKLFDPEASW-DKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL

Query:  LAWILVYSLAHF
        + WI+ Y+  H+
Subjt:  LAWILVYSLAHF

Arabidopsis top hits

e value

%identity

Alignment

AT2G29020.1 Rab5-interacting family protein

3.4e-49

69.92

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Query:  MKEAKPVKFNLHQHQD----HQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEE
        MKE K  K +  Q Q     HQN HL  F  AKLFD EASWDKDQLGDVLHWIRQ V ++ GLLWG+IPLVGGIW L+FLAIS+ +VYGYYA++LK+DEE
Subjt:  MKEAKPVKFNLHQHQD----HQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEE

Query:  EFGGHGALLQEGLFASITLFLLAWILVYSLAHF
        +FGGH ALLQ+GLFAS++LFLLAWILVYSL+ F
Subjt:  EFGGHGALLQEGLFASITLFLLAWILVYSLAHF

AT5G59410.1 Rab5-interacting family protein

4.9e-56

79.23

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Query:  MKEAKPVKFN-LHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFG
        MKE+K  K N L Q ++HQN HL+P KLAKLFDP+ASWDKDQLGDVLHWIRQ V ++ GLLWGSIPLVGGIW ++FLAIS+ +VYGYYAMILKVDEE+FG
Subjt:  MKEAKPVKFN-LHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFG

Query:  GHGALLQEGLFASITLFLLAWILVYSLAHF
        GH ALLQEGLFAS+TLFLLAWILVYSLAHF
Subjt:  GHGALLQEGLFASITLFLLAWILVYSLAHF

Sequences

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CDS sequence

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ATGAAAGAAGCAAAACCGGTTAAGTTCAATCTTCATCAGCATCAAGATCATCAGAATGGTCATTTGGCTCCATTCAAGCTCGCTAAATTATTCGATCCAGAAGCCTCCTG
GGACAAGGACCAACTGGGAGATGTTTTGCACTGGATTCGACAAGCAGTGGCCGTTGTACTTGGACTGTTGTGGGGATCCATACCTTTGGTTGGAGGCATTTGGTTTCTAA
TTTTCTTGGCGATATCAACAAGCGTTGTATATGGATACTATGCAATGATATTAAAAGTCGATGAAGAAGAATTTGGAGGTCATGGAGCTCTCCTCCAAGAGGGCCTTTTT
GCTTCTATAACTCTCTTTCTGCTTGCTTGGATTCTCGTATACAGCTTGGCACACTTTTGA

mRNA sequence

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CGAGAGACGACGATCCATTTTTGCTTTGCAGTGATTTGACCGCAAATGAATCCTTCAAATCCAAGTTTCTTCCTCGTTGATCCAACCGTTTTTCTCAATCTTCTTCTCTG
AAATACAGTGTTTCTATTCCGACTGTAGCATTTTATCTGCACTTTTTTCCGGAATCTAGATCTAAGCTTACTGTAGATTCTTTGGTTGTTTCTGTTCGATTTTCCCGAAG
AGTGATTGATTGAATTATCCGGTATGAAAGAAGCAAAACCGGTTAAGTTCAATCTTCATCAGCATCAAGATCATCAGAATGGTCATTTGGCTCCATTCAAGCTCGCTAAA
TTATTCGATCCAGAAGCCTCCTGGGACAAGGACCAACTGGGAGATGTTTTGCACTGGATTCGACAAGCAGTGGCCGTTGTACTTGGACTGTTGTGGGGATCCATACCTTT
GGTTGGAGGCATTTGGTTTCTAATTTTCTTGGCGATATCAACAAGCGTTGTATATGGATACTATGCAATGATATTAAAAGTCGATGAAGAAGAATTTGGAGGTCATGGAG
CTCTCCTCCAAGAGGGCCTTTTTGCTTCTATAACTCTCTTTCTGCTTGCTTGGATTCTCGTATACAGCTTGGCACACTTTTGATTGGCAAAGAATGATTTGACATCCTGA
AAATTACTTGGAAGAGGGAAAGAAAGGCTGCTGCTAACTGCCAGAAACACAACTTGAGACTACTTAATCGAGACCAAGGAGGTGGAGGTTCGAATCATTAATATGTTTTT
ATAATTAACTTTTGTTGGTTGAAGTTTCTTTATAGATTAGAATCATTGTTGGGATTCTGGAGAATATTATTGGCGATAGACTGATAGTTCTTTTTTTCAAATGTATAGTT
AAATGTTAGATCCATCCACTTTATACTCCATCTCTAGTTAGTTTTGTTTCTTAGAATCTTTTTTATGTCTGTAGCTTTCTTTGCTGAAATGGAAGATTTTAAGATAATCT
AATTAAAAATTGACTGCAGTTAA

Protein sequence

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MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLF
ASITLFLLAWILVYSLAHF

PI0013798 (gene) of Melon (PI 482460) v1 genome