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PI0013811 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013811
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr07:10163209..10163976
RNA-Seq ExpressionPI0013811
SyntenyPI0013811
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045021.1 hypothetical protein E6C27_scaffold30G00060 [Cucumis melo var. makuwa]2.4e-1251.72Show/hide
Query:  FYFGLNKATQQNVNAVFVGG-MLKSTYNLIKATLATMTSNNEEWDEDDFGN------SRGRRERSDEGMDKNVVVALQGQMIAMNLL
        FYFGL++ TQQ V A+FVGG ML+S+YN I+ TL  MT+N++EW +D FG+      +RG ++R D+G+D+NV+VAL+GQ+  M+ L
Subjt:  FYFGLNKATQQNVNAVFVGG-MLKSTYNLIKATLATMTSNNEEWDEDDFGN------SRGRRERSDEGMDKNVVVALQGQMIAMNLL

KAA0046468.1 hypothetical protein E6C27_scaffold543G00470 [Cucumis melo var. makuwa]8.6e-1047.73Show/hide
Query:  MEVFYFGLNKATQQNVNAVFVGGMLKSTYNLIKATLATMTSNNEEWDEDDFGNSR---GRRERSDEGMDKNVVVALQGQMIAMNLLKS
        ME FYF L++  QQ V+ VFVGG+L+++YN  K  L TM SN++E  +D   + +     R R+DEGMD+N +V LQGQ+  MN L S
Subjt:  MEVFYFGLNKATQQNVNAVFVGGMLKSTYNLIKATLATMTSNNEEWDEDDFGNSR---GRRERSDEGMDKNVVVALQGQMIAMNLLKS

KAA0048713.1 hypothetical protein E6C27_scaffold43G00050 [Cucumis melo var. makuwa]3.8e-1835.75Show/hide
Query:  MEVFYFGLNKATQQNVNAVFVGGMLKSTYNLIKATLATMTSNNEEWDEDDFGN------SRGRRERSDEGMDKNVVVALQGQMIAMNLLKSMTISQ----
        ME FYFGL+K T Q+ N VF GGML+S+YN IK  L TM SN++EW ++ FG+      ++G R R ++G+D +++VALQGQ+I MN+L+SM + Q    
Subjt:  MEVFYFGLNKATQQNVNAVFVGGMLKSTYNLIKATLATMTSNNEEWDEDDFGN------SRGRRERSDEGMDKNVVVALQGQMIAMNLLKSMTISQ----

Query:  -------------------------------------KNDA-----------------------LKVQLGQLANDFFGRPQGSLLSNTKTPNQ
                                             KND                        +++QLGQL +DF  RP+ S  SNT+TPNQ
Subjt:  -------------------------------------KNDA-----------------------LKVQLGQLANDFFGRPQGSLLSNTKTPNQ

KGN44484.1 hypothetical protein Csa_015918 [Cucumis sativus]1.1e-2064.21Show/hide
Query:  MEVFYFGLNKATQQNVNAVFVGGMLKSTYNLIKATLATMTSNNEEWDEDDFGNSRGRRERSDEGMDKNVVVALQGQMIAM-NLLKSMTISQKNDA
        MEVFYFGL+K T Q VN +FVGGML+S+YN IKATL +M++N++EWD+  FG+    R R+ EG+DK+VVV LQGQMIAM NLL+SMT+SQ N A
Subjt:  MEVFYFGLNKATQQNVNAVFVGGMLKSTYNLIKATLATMTSNNEEWDEDDFGNSRGRRERSDEGMDKNVVVALQGQMIAM-NLLKSMTISQKNDA

KGN53801.1 hypothetical protein Csa_014772 [Cucumis sativus]5.4e-1247.47Show/hide
Query:  MEVFYFGLNKATQQNVNAVFVGGMLKSTYNLIKATLATMTSNNEEWDEDDFGN---SRGRRE---RSDEGMDKNVVVALQGQMIAMN-LLKSMTISQKN
        +E FYFGL++ TQQ V+AVF+GGML+ + N IK TL  M SN++EW +++FG+   S+G R    R+++G + N ++ LQ Q+  MN LL+SM +SQ N
Subjt:  MEVFYFGLNKATQQNVNAVFVGGMLKSTYNLIKATLATMTSNNEEWDEDDFGN---SRGRRE---RSDEGMDKNVVVALQGQMIAMN-LLKSMTISQKN

TrEMBL top hitse value%identityAlignment
A0A0A0K6F9 Uncharacterized protein5.2e-2164.21Show/hide
Query:  MEVFYFGLNKATQQNVNAVFVGGMLKSTYNLIKATLATMTSNNEEWDEDDFGNSRGRRERSDEGMDKNVVVALQGQMIAM-NLLKSMTISQKNDA
        MEVFYFGL+K T Q VN +FVGGML+S+YN IKATL +M++N++EWD+  FG+    R R+ EG+DK+VVV LQGQMIAM NLL+SMT+SQ N A
Subjt:  MEVFYFGLNKATQQNVNAVFVGGMLKSTYNLIKATLATMTSNNEEWDEDDFGNSRGRRERSDEGMDKNVVVALQGQMIAM-NLLKSMTISQKNDA

A0A0A0L0Y4 Uncharacterized protein2.6e-1247.47Show/hide
Query:  MEVFYFGLNKATQQNVNAVFVGGMLKSTYNLIKATLATMTSNNEEWDEDDFGN---SRGRRE---RSDEGMDKNVVVALQGQMIAMN-LLKSMTISQKN
        +E FYFGL++ TQQ V+AVF+GGML+ + N IK TL  M SN++EW +++FG+   S+G R    R+++G + N ++ LQ Q+  MN LL+SM +SQ N
Subjt:  MEVFYFGLNKATQQNVNAVFVGGMLKSTYNLIKATLATMTSNNEEWDEDDFGN---SRGRRE---RSDEGMDKNVVVALQGQMIAMN-LLKSMTISQKN

A0A5A7TUE1 Uncharacterized protein4.2e-1047.73Show/hide
Query:  MEVFYFGLNKATQQNVNAVFVGGMLKSTYNLIKATLATMTSNNEEWDEDDFGNSR---GRRERSDEGMDKNVVVALQGQMIAMNLLKS
        ME FYF L++  QQ V+ VFVGG+L+++YN  K  L TM SN++E  +D   + +     R R+DEGMD+N +V LQGQ+  MN L S
Subjt:  MEVFYFGLNKATQQNVNAVFVGGMLKSTYNLIKATLATMTSNNEEWDEDDFGNSR---GRRERSDEGMDKNVVVALQGQMIAMNLLKS

A0A5D3CC26 Uncharacterized protein1.9e-1835.75Show/hide
Query:  MEVFYFGLNKATQQNVNAVFVGGMLKSTYNLIKATLATMTSNNEEWDEDDFGN------SRGRRERSDEGMDKNVVVALQGQMIAMNLLKSMTISQ----
        ME FYFGL+K T Q+ N VF GGML+S+YN IK  L TM SN++EW ++ FG+      ++G R R ++G+D +++VALQGQ+I MN+L+SM + Q    
Subjt:  MEVFYFGLNKATQQNVNAVFVGGMLKSTYNLIKATLATMTSNNEEWDEDDFGN------SRGRRERSDEGMDKNVVVALQGQMIAMNLLKSMTISQ----

Query:  -------------------------------------KNDA-----------------------LKVQLGQLANDFFGRPQGSLLSNTKTPNQ
                                             KND                        +++QLGQL +DF  RP+ S  SNT+TPNQ
Subjt:  -------------------------------------KNDA-----------------------LKVQLGQLANDFFGRPQGSLLSNTKTPNQ

A0A5D3CV99 Uncharacterized protein1.2e-1251.72Show/hide
Query:  FYFGLNKATQQNVNAVFVGG-MLKSTYNLIKATLATMTSNNEEWDEDDFGN------SRGRRERSDEGMDKNVVVALQGQMIAMNLL
        FYFGL++ TQQ V A+FVGG ML+S+YN I+ TL  MT+N++EW +D FG+      +RG ++R D+G+D+NV+VAL+GQ+  M+ L
Subjt:  FYFGLNKATQQNVNAVFVGG-MLKSTYNLIKATLATMTSNNEEWDEDDFGN------SRGRRERSDEGMDKNVVVALQGQMIAMNLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGTGTTCTATTTTGGTCTCAACAAGGCGACACAGCAGAATGTTAATGCAGTGTTTGTAGGCGGTATGTTGAAAAGCACATATAACCTGATTAAGGCAACGTTGGC
TACAATGACCAGCAACAATGAAGAATGGGATGAAGACGATTTCGGCAATAGCCGAGGAAGACGAGAAAGAAGTGATGAGGGAATGGATAAGAACGTCGTGGTGGCATTGC
AAGGACAAATGATTGCGATGAACCTGTTAAAGTCAATGACAATATCGCAGAAGAATGATGCCCTGAAGGTACAGTTGGGGCAGTTGGCCAACGATTTCTTCGGAAGGCCA
CAAGGATCACTCCTTAGCAATACAAAAACGCCTAATCAGGTTGGAGGATCTGAAAAAGAGAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGTGTTCTATTTTGGTCTCAACAAGGCGACACAGCAGAATGTTAATGCAGTGTTTGTAGGCGGTATGTTGAAAAGCACATATAACCTGATTAAGGCAACGTTGGC
TACAATGACCAGCAACAATGAAGAATGGGATGAAGACGATTTCGGCAATAGCCGAGGAAGACGAGAAAGAAGTGATGAGGGAATGGATAAGAACGTCGTGGTGGCATTGC
AAGGACAAATGATTGCGATGAACCTGTTAAAGTCAATGACAATATCGCAGAAGAATGATGCCCTGAAGGTACAGTTGGGGCAGTTGGCCAACGATTTCTTCGGAAGGCCA
CAAGGATCACTCCTTAGCAATACAAAAACGCCTAATCAGGTTGGAGGATCTGAAAAAGAGAAGTAA
Protein sequenceShow/hide protein sequence
MEVFYFGLNKATQQNVNAVFVGGMLKSTYNLIKATLATMTSNNEEWDEDDFGNSRGRRERSDEGMDKNVVVALQGQMIAMNLLKSMTISQKNDALKVQLGQLANDFFGRP
QGSLLSNTKTPNQVGGSEKEK