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PI0013812 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013812
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr12:24158249..24158917
RNA-Seq ExpressionPI0013812
SyntenyPI0013812
Gene Ontology termsGO:0048507 - meristem development (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025972.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.0e-5062.77Show/hide
Query:  RLYITRSGAVVGHLRSNNRRLRDVADDPQQALDICNNNERYMEEIHYMYDVPIVPPPVHRGHVRVEEPKLDEVYHNVEEVPLVIHTQSQTGYG-------
        RLYIT+ GA     RSNN RLRDVADD QQ LDICNNN+R+MEEIH MY +PIVPP +HRG V+VEE +LDEVYHNVEE+      Q+QTGYG       
Subjt:  RLYITRSGAVVGHLRSNNRRLRDVADDPQQALDICNNNERYMEEIHYMYDVPIVPPPVHRGHVRVEEPKLDEVYHNVEEVPLVIHTQSQTGYG-------

Query:  --------------YYDSGVGPLSSYMDVGPSTSYMHGHGHGHGHGCGRREYDEYLYYEAPTDVPDPQEYQQEPENQEKPGQPRVQSR
                      YYDSGVGP SSYMDVGPSTSYMHGH H +G      E++EYLY+EAPT+V D QEYQQEPENQE+  Q RVQSR
Subjt:  --------------YYDSGVGPLSSYMDVGPSTSYMHGHGHGHGHGCGRREYDEYLYYEAPTDVPDPQEYQQEPENQEKPGQPRVQSR

KAA0062642.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.9e-5867.69Show/hide
Query:  RLYITRSGAVVGHLRSNNRRLRDVADDPQQALDICNNNERYMEEIHYMYDVPIVPPPVHRGHVRVEEPKLDEVYHNVEEVPLVIHTQSQTGY--------
        RLYITR GA VG  RSNN RLRDVADD QQ LDICNNNERYMEEIH MYD+PIVPPPVHRG VRVEE +LD+VYHNVEEVP    TQSQTGY        
Subjt:  RLYITRSGAVVGHLRSNNRRLRDVADDPQQALDICNNNERYMEEIHYMYDVPIVPPPVHRGHVRVEEPKLDEVYHNVEEVPLVIHTQSQTGY--------

Query:  -------------GYYDSGVGPLSSYMDVGPSTSYMHGHGHGHGHGCGRREYDEYLYYEAPTDVPDPQEYQQEPENQEKPGQPRVQSRRQQPARN
                     GYYD+GVGP SSY+DV PSTSYMHGH  G+G      E++EYLY+EAP DV D QEYQQEPENQE   Q RVQSRR+QP RN
Subjt:  -------------GYYDSGVGPLSSYMDVGPSTSYMHGHGHGHGHGCGRREYDEYLYYEAPTDVPDPQEYQQEPENQEKPGQPRVQSRRQQPARN

TYK01176.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]1.3e-5367.4Show/hide
Query:  RSNNRRLRDVADDPQQALDICNNNERYMEEIHYMYDVPIVPPPVHRGHVRVEEPKLDEVYHNVEEVPLVIHTQSQTGY---------------------G
        RSNN RLRDVADD QQ LDICNNNERYMEEIH MYD+PIVPPPVHRG VRVEE +LD+VYHNVEEVP    TQSQTGY                     G
Subjt:  RSNNRRLRDVADDPQQALDICNNNERYMEEIHYMYDVPIVPPPVHRGHVRVEEPKLDEVYHNVEEVPLVIHTQSQTGY---------------------G

Query:  YYDSGVGPLSSYMDVGPSTSYMHGHGHGHGHGCGRREYDEYLYYEAPTDVPDPQEYQQEPENQEKPGQPRVQSRRQQPARN
        YYD+GVGP SSY+DV PSTSYMHGH  G+G      E++EYLY+EAP DV D QEYQQEPENQE   Q RVQSRR+QP RN
Subjt:  YYDSGVGPLSSYMDVGPSTSYMHGHGHGHGHGCGRREYDEYLYYEAPTDVPDPQEYQQEPENQEKPGQPRVQSRRQQPARN

TYK22189.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]8.4e-5370.41Show/hide
Query:  RSGAVVGHLRSNNRRLRDVADDPQQALDICNNNERYMEEIHYMYDVPIVPPPVHRGHVRVEEPKLDEVYHNVEEVPLVIHTQSQTGYGYYDSGVGPLSSY
        RS   V  LRSNN RLRDVADDPQQ LDICNNNERYMEEIH +YD+PIVPPP+HRG VRVEE +LDEVYH V+EV  +  TQSQTGY     GVGP SSY
Subjt:  RSGAVVGHLRSNNRRLRDVADDPQQALDICNNNERYMEEIHYMYDVPIVPPPVHRGHVRVEEPKLDEVYHNVEEVPLVIHTQSQTGYGYYDSGVGPLSSY

Query:  MDVGPSTSYMHGHGHGHGHGCGRREYDEYLYYEAPTDVPDPQEYQQEPENQEKPGQPRVQSRRQQPARN
        MDV PSTSYMHGH  G+       E++EYLY+EAP DV D QEYQQEPENQE   Q RVQSRR+QPA+N
Subjt:  MDVGPSTSYMHGHGHGHGHGCGRREYDEYLYYEAPTDVPDPQEYQQEPENQEKPGQPRVQSRRQQPARN

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]2.2e-6168.21Show/hide
Query:  RLYITRSGAVVGHLRSNNRRLRDVADDPQQALDICNNNERYMEEIHYMYDVPIVPPPVHRGHVRVEEPKLDEVYHNVEEVPLVIHTQSQTGY--------
        RLYITR GA+VGHLRSNN RLRDV +DPQQ LDICNNNERYME+IH +YD+PIVPPPVHR   RVEE +LDEVYHNVEEVP    TQSQTGY        
Subjt:  RLYITRSGAVVGHLRSNNRRLRDVADDPQQALDICNNNERYMEEIHYMYDVPIVPPPVHRGHVRVEEPKLDEVYHNVEEVPLVIHTQSQTGY--------

Query:  -------------GYYDSGVGPLSSYMDVGPSTSYMHGHGHGHGHGCGRREYDEYLYYEAPTDVPDPQEYQQEPENQEKPGQPRVQSRRQQPARN
                     GYYD+ VGPLSSYMDVGPSTSYM+GHG G+G      E++EYLY+EAPTDV D QEYQQEP+NQE   Q RVQSRR+QPARN
Subjt:  -------------GYYDSGVGPLSSYMDVGPSTSYMHGHGHGHGHGCGRREYDEYLYYEAPTDVPDPQEYQQEPENQEKPGQPRVQSRRQQPARN

TrEMBL top hitse value%identityAlignment
A0A5A7SLF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X15.0e-5162.77Show/hide
Query:  RLYITRSGAVVGHLRSNNRRLRDVADDPQQALDICNNNERYMEEIHYMYDVPIVPPPVHRGHVRVEEPKLDEVYHNVEEVPLVIHTQSQTGYG-------
        RLYIT+ GA     RSNN RLRDVADD QQ LDICNNN+R+MEEIH MY +PIVPP +HRG V+VEE +LDEVYHNVEE+      Q+QTGYG       
Subjt:  RLYITRSGAVVGHLRSNNRRLRDVADDPQQALDICNNNERYMEEIHYMYDVPIVPPPVHRGHVRVEEPKLDEVYHNVEEVPLVIHTQSQTGYG-------

Query:  --------------YYDSGVGPLSSYMDVGPSTSYMHGHGHGHGHGCGRREYDEYLYYEAPTDVPDPQEYQQEPENQEKPGQPRVQSR
                      YYDSGVGP SSYMDVGPSTSYMHGH H +G      E++EYLY+EAPT+V D QEYQQEPENQE+  Q RVQSR
Subjt:  --------------YYDSGVGPLSSYMDVGPSTSYMHGHGHGHGHGCGRREYDEYLYYEAPTDVPDPQEYQQEPENQEKPGQPRVQSR

A0A5A7V342 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.9e-5867.69Show/hide
Query:  RLYITRSGAVVGHLRSNNRRLRDVADDPQQALDICNNNERYMEEIHYMYDVPIVPPPVHRGHVRVEEPKLDEVYHNVEEVPLVIHTQSQTGY--------
        RLYITR GA VG  RSNN RLRDVADD QQ LDICNNNERYMEEIH MYD+PIVPPPVHRG VRVEE +LD+VYHNVEEVP    TQSQTGY        
Subjt:  RLYITRSGAVVGHLRSNNRRLRDVADDPQQALDICNNNERYMEEIHYMYDVPIVPPPVHRGHVRVEEPKLDEVYHNVEEVPLVIHTQSQTGY--------

Query:  -------------GYYDSGVGPLSSYMDVGPSTSYMHGHGHGHGHGCGRREYDEYLYYEAPTDVPDPQEYQQEPENQEKPGQPRVQSRRQQPARN
                     GYYD+GVGP SSY+DV PSTSYMHGH  G+G      E++EYLY+EAP DV D QEYQQEPENQE   Q RVQSRR+QP RN
Subjt:  -------------GYYDSGVGPLSSYMDVGPSTSYMHGHGHGHGHGCGRREYDEYLYYEAPTDVPDPQEYQQEPENQEKPGQPRVQSRRQQPARN

A0A5D3BSG8 GATA zinc finger domain-containing protein 10-like isoform X26.3e-5467.4Show/hide
Query:  RSNNRRLRDVADDPQQALDICNNNERYMEEIHYMYDVPIVPPPVHRGHVRVEEPKLDEVYHNVEEVPLVIHTQSQTGY---------------------G
        RSNN RLRDVADD QQ LDICNNNERYMEEIH MYD+PIVPPPVHRG VRVEE +LD+VYHNVEEVP    TQSQTGY                     G
Subjt:  RSNNRRLRDVADDPQQALDICNNNERYMEEIHYMYDVPIVPPPVHRGHVRVEEPKLDEVYHNVEEVPLVIHTQSQTGY---------------------G

Query:  YYDSGVGPLSSYMDVGPSTSYMHGHGHGHGHGCGRREYDEYLYYEAPTDVPDPQEYQQEPENQEKPGQPRVQSRRQQPARN
        YYD+GVGP SSY+DV PSTSYMHGH  G+G      E++EYLY+EAP DV D QEYQQEPENQE   Q RVQSRR+QP RN
Subjt:  YYDSGVGPLSSYMDVGPSTSYMHGHGHGHGHGCGRREYDEYLYYEAPTDVPDPQEYQQEPENQEKPGQPRVQSRRQQPARN

A0A5D3DFZ9 GATA zinc finger domain-containing protein 10-like isoform X24.1e-5370.41Show/hide
Query:  RSGAVVGHLRSNNRRLRDVADDPQQALDICNNNERYMEEIHYMYDVPIVPPPVHRGHVRVEEPKLDEVYHNVEEVPLVIHTQSQTGYGYYDSGVGPLSSY
        RS   V  LRSNN RLRDVADDPQQ LDICNNNERYMEEIH +YD+PIVPPP+HRG VRVEE +LDEVYH V+EV  +  TQSQTGY     GVGP SSY
Subjt:  RSGAVVGHLRSNNRRLRDVADDPQQALDICNNNERYMEEIHYMYDVPIVPPPVHRGHVRVEEPKLDEVYHNVEEVPLVIHTQSQTGYGYYDSGVGPLSSY

Query:  MDVGPSTSYMHGHGHGHGHGCGRREYDEYLYYEAPTDVPDPQEYQQEPENQEKPGQPRVQSRRQQPARN
        MDV PSTSYMHGH  G+       E++EYLY+EAP DV D QEYQQEPENQE   Q RVQSRR+QPA+N
Subjt:  MDVGPSTSYMHGHGHGHGHGCGRREYDEYLYYEAPTDVPDPQEYQQEPENQEKPGQPRVQSRRQQPARN

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein1.1e-6168.21Show/hide
Query:  RLYITRSGAVVGHLRSNNRRLRDVADDPQQALDICNNNERYMEEIHYMYDVPIVPPPVHRGHVRVEEPKLDEVYHNVEEVPLVIHTQSQTGY--------
        RLYITR GA+VGHLRSNN RLRDV +DPQQ LDICNNNERYME+IH +YD+PIVPPPVHR   RVEE +LDEVYHNVEEVP    TQSQTGY        
Subjt:  RLYITRSGAVVGHLRSNNRRLRDVADDPQQALDICNNNERYMEEIHYMYDVPIVPPPVHRGHVRVEEPKLDEVYHNVEEVPLVIHTQSQTGY--------

Query:  -------------GYYDSGVGPLSSYMDVGPSTSYMHGHGHGHGHGCGRREYDEYLYYEAPTDVPDPQEYQQEPENQEKPGQPRVQSRRQQPARN
                     GYYD+ VGPLSSYMDVGPSTSYM+GHG G+G      E++EYLY+EAPTDV D QEYQQEP+NQE   Q RVQSRR+QPARN
Subjt:  -------------GYYDSGVGPLSSYMDVGPSTSYMHGHGHGHGHGCGRREYDEYLYYEAPTDVPDPQEYQQEPENQEKPGQPRVQSRRQQPARN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCTCTACATCACTCGATCGGGAGCAGTTGTGGGTCATCTGAGATCGAACAACAGAAGACTTCGTGATGTTGCAGATGATCCACAACAAGCCCTTGATATATGTAA
TAATAATGAGAGGTACATGGAGGAGATACATTATATGTACGATGTACCTATTGTACCTCCACCAGTTCACAGGGGACATGTTCGAGTGGAAGAACCTAAACTTGATGAAG
TTTACCATAATGTAGAAGAAGTACCTCTAGTGATACATACACAGAGCCAAACTGGTTATGGATATTATGACTCAGGGGTCGGTCCATTGTCTTCATACATGGATGTCGGT
CCATCAACTTCTTACATGCATGGACATGGACATGGACACGGACACGGATGTGGCCGTAGAGAATATGACGAATATCTGTACTATGAAGCACCTACAGACGTCCCAGATCC
ACAAGAGTACCAACAAGAACCAGAGAATCAAGAGAAGCCAGGGCAACCTAGAGTTCAGAGTCGACGACAACAACCAGCTCGAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGCTCTACATCACTCGATCGGGAGCAGTTGTGGGTCATCTGAGATCGAACAACAGAAGACTTCGTGATGTTGCAGATGATCCACAACAAGCCCTTGATATATGTAA
TAATAATGAGAGGTACATGGAGGAGATACATTATATGTACGATGTACCTATTGTACCTCCACCAGTTCACAGGGGACATGTTCGAGTGGAAGAACCTAAACTTGATGAAG
TTTACCATAATGTAGAAGAAGTACCTCTAGTGATACATACACAGAGCCAAACTGGTTATGGATATTATGACTCAGGGGTCGGTCCATTGTCTTCATACATGGATGTCGGT
CCATCAACTTCTTACATGCATGGACATGGACATGGACACGGACACGGATGTGGCCGTAGAGAATATGACGAATATCTGTACTATGAAGCACCTACAGACGTCCCAGATCC
ACAAGAGTACCAACAAGAACCAGAGAATCAAGAGAAGCCAGGGCAACCTAGAGTTCAGAGTCGACGACAACAACCAGCTCGAAATTGA
Protein sequenceShow/hide protein sequence
MRLYITRSGAVVGHLRSNNRRLRDVADDPQQALDICNNNERYMEEIHYMYDVPIVPPPVHRGHVRVEEPKLDEVYHNVEEVPLVIHTQSQTGYGYYDSGVGPLSSYMDVG
PSTSYMHGHGHGHGHGCGRREYDEYLYYEAPTDVPDPQEYQQEPENQEKPGQPRVQSRRQQPARN