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PI0013815 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013815
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr12:13891564..13893191
RNA-Seq ExpressionPI0013815
SyntenyPI0013815
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049609.1 transposase [Cucumis melo var. makuwa]2.1e-1943.57Show/hide
Query:  KVSFNAKSINDLYNLPNDAETPKNE----------------YVVW----LTKKMAREALELHLHQLTTKANVWVFFIKKKIFPTRHDSSINLESAMLMYC
        KV F  + IN+LY+LPND      +                 +VW     T    R  L+L  HQLT +ANVW+FFIKKKIFPT HDS+I  E A+++YC
Subjt:  KVSFNAKSINDLYNLPNDAETPKNE----------------YVVW----LTKKMAREALELHLHQLTTKANVWVFFIKKKIFPTRHDSSINLESAMLMYC

Query:  ILKKWCINLGDLIANTILSWMEAPKGAMPFPSIMEALCLR
        I  K   NLG ++    LSWM  PK A PFP+ ++ LCL+
Subjt:  ILKKWCINLGDLIANTILSWMEAPKGAMPFPSIMEALCLR

KAA0050752.1 hypothetical protein E6C27_scaffold46449G00010 [Cucumis melo var. makuwa]7.9e-1944.06Show/hide
Query:  TRHDSSINLESAMLMYCILKKWCINLGDLIANTILSWMEAPKGAMPFPSIMEALCLRAHPYICAVTQMPISGDLCSLVALNHMITLHVHKEIERRLKTLG
        TRHD++I L  AM++YCI KK  +NLG +I N+ILS M+APK  MPFP  ++ALCL+  P +   +Q PI   +CS V LN  ITLH +KE +R LKTL 
Subjt:  TRHDSSINLESAMLMYCILKKWCINLGDLIANTILSWMEAPKGAMPFPSIMEALCLRAHPYICAVTQMPISGDLCSLVALNHMITLHVHKEIERRLKTLG

Query:  QEDKEEDETQVESLKRKAPSTASTSKPIVKKSKVDAKAQHHNK
        +   EE E        K   +  ++  + KK K + +A+H +K
Subjt:  QEDKEEDETQVESLKRKAPSTASTSKPIVKKSKVDAKAQHHNK

KAA0057279.1 hypothetical protein E6C27_scaffold280G001200 [Cucumis melo var. makuwa]9.4e-2045.39Show/hide
Query:  PTRHDSSINLESAMLMYCILKKWCINLGDLIANTILSWMEAPKGAMPFPSIMEALCLRAHPYICAVTQMPISGDLCSLVALNHMITLHVHKEIERRLKTL
        PTRHD++I LE AM++YCI KK  +NLG +I N+ILS MEAPK  MPFP  ++ALCL+A P +    Q PIS  +C    LN  I LH +KE ER +KTL
Subjt:  PTRHDSSINLESAMLMYCILKKWCINLGDLIANTILSWMEAPKGAMPFPSIMEALCLRAHPYICAVTQMPISGDLCSLVALNHMITLHVHKEIERRLKTL

Query:  GQEDKEEDETQVESLKRKAPSTASTSKPIVKKSKVDAKAQH
         +   EE+E        K   +  +   + KK K + +A+H
Subjt:  GQEDKEEDETQVESLKRKAPSTASTSKPIVKKSKVDAKAQH

KAA0062900.1 gag/pol protein [Cucumis melo var. makuwa]1.7e-2946.15Show/hide
Query:  RLRMGVVKKFYVAKPDVKDFSMQLSGMKVSFNAKSINDLYNLPNDAETPKNEYVVWLTKKMAREAL-------------------ELHLHQLTTKANVWV
        ++RM VV KFY  K +  D  + +   K  FN + IN+LYN PNDAE    E V   TK +A+EAL                   +L+ H LTTKANVW+
Subjt:  RLRMGVVKKFYVAKPDVKDFSMQLSGMKVSFNAKSINDLYNLPNDAETPKNEYVVWLTKKMAREAL-------------------ELHLHQLTTKANVWV

Query:  FFIKKKIFPTRHDSSINLESAMLMYCILKKWCINLGDLIANTILSWMEAPKGAMPFPSIMEALCLRAHP
        FF K KIFPT +DS+I+++  +++YCI+ K  INL ++I   IL+WME PK AMPFPS+ME LCL+  P
Subjt:  FFIKKKIFPTRHDSSINLESAMLMYCILKKWCINLGDLIANTILSWMEAPKGAMPFPSIMEALCLRAHP

TYK15967.1 hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa]2.1e-1943.57Show/hide
Query:  KVSFNAKSINDLYNLPNDAETPKNE----------------YVVW----LTKKMAREALELHLHQLTTKANVWVFFIKKKIFPTRHDSSINLESAMLMYC
        KV F  + IN+LY+LPND      +                 +VW     T    R  L+L  HQLT +ANVW+FFIKKKIFPT HDS+I  E A+++YC
Subjt:  KVSFNAKSINDLYNLPNDAETPKNE----------------YVVW----LTKKMAREALELHLHQLTTKANVWVFFIKKKIFPTRHDSSINLESAMLMYC

Query:  ILKKWCINLGDLIANTILSWMEAPKGAMPFPSIMEALCLR
        I  K   NLG ++    LSWM  PK A PFP+ ++ LCL+
Subjt:  ILKKWCINLGDLIANTILSWMEAPKGAMPFPSIMEALCLR

TrEMBL top hitse value%identityAlignment
A0A5A7SLS8 Uncharacterized protein3.8e-1950.39Show/hide
Query:  MLMYCILKKWCINLGDLIANTILSWMEAPKGAMPFPSIMEALCLRAHPYICAVTQMPISGDLCSLVALNHMITLHVHKEIERRLKTLGQEDKEEDETQV-
        M++Y I KK  +NLG +I N+ILSWM+ P+G MPFPS +EALCL+A P + A +Q PI G + S   LN  ITLH +KE ER LKTL +   EE+E  + 
Subjt:  MLMYCILKKWCINLGDLIANTILSWMEAPKGAMPFPSIMEALCLRAHPYICAVTQMPISGDLCSLVALNHMITLHVHKEIERRLKTLGQEDKEEDETQV-

Query:  ---ESLKR-KAPSTASTSKPIVKKSKVDA
             LKR KA   AS+SK   K+ K DA
Subjt:  ---ESLKR-KAPSTASTSKPIVKKSKVDA

A0A5A7U806 Transposase1.0e-1943.57Show/hide
Query:  KVSFNAKSINDLYNLPNDAETPKNE----------------YVVW----LTKKMAREALELHLHQLTTKANVWVFFIKKKIFPTRHDSSINLESAMLMYC
        KV F  + IN+LY+LPND      +                 +VW     T    R  L+L  HQLT +ANVW+FFIKKKIFPT HDS+I  E A+++YC
Subjt:  KVSFNAKSINDLYNLPNDAETPKNE----------------YVVW----LTKKMAREALELHLHQLTTKANVWVFFIKKKIFPTRHDSSINLESAMLMYC

Query:  ILKKWCINLGDLIANTILSWMEAPKGAMPFPSIMEALCLR
        I  K   NLG ++    LSWM  PK A PFP+ ++ LCL+
Subjt:  ILKKWCINLGDLIANTILSWMEAPKGAMPFPSIMEALCLR

A0A5A7UUR1 Uncharacterized protein4.5e-2045.39Show/hide
Query:  PTRHDSSINLESAMLMYCILKKWCINLGDLIANTILSWMEAPKGAMPFPSIMEALCLRAHPYICAVTQMPISGDLCSLVALNHMITLHVHKEIERRLKTL
        PTRHD++I LE AM++YCI KK  +NLG +I N+ILS MEAPK  MPFP  ++ALCL+A P +    Q PIS  +C    LN  I LH +KE ER +KTL
Subjt:  PTRHDSSINLESAMLMYCILKKWCINLGDLIANTILSWMEAPKGAMPFPSIMEALCLRAHPYICAVTQMPISGDLCSLVALNHMITLHVHKEIERRLKTL

Query:  GQEDKEEDETQVESLKRKAPSTASTSKPIVKKSKVDAKAQH
         +   EE+E        K   +  +   + KK K + +A+H
Subjt:  GQEDKEEDETQVESLKRKAPSTASTSKPIVKKSKVDAKAQH

A0A5A7V6M5 Gag/pol protein8.2e-3046.15Show/hide
Query:  RLRMGVVKKFYVAKPDVKDFSMQLSGMKVSFNAKSINDLYNLPNDAETPKNEYVVWLTKKMAREAL-------------------ELHLHQLTTKANVWV
        ++RM VV KFY  K +  D  + +   K  FN + IN+LYN PNDAE    E V   TK +A+EAL                   +L+ H LTTKANVW+
Subjt:  RLRMGVVKKFYVAKPDVKDFSMQLSGMKVSFNAKSINDLYNLPNDAETPKNEYVVWLTKKMAREAL-------------------ELHLHQLTTKANVWV

Query:  FFIKKKIFPTRHDSSINLESAMLMYCILKKWCINLGDLIANTILSWMEAPKGAMPFPSIMEALCLRAHP
        FF K KIFPT +DS+I+++  +++YCI+ K  INL ++I   IL+WME PK AMPFPS+ME LCL+  P
Subjt:  FFIKKKIFPTRHDSSINLESAMLMYCILKKWCINLGDLIANTILSWMEAPKGAMPFPSIMEALCLRAHP

A0A5D3CVL7 Uncharacterized protein1.0e-1943.57Show/hide
Query:  KVSFNAKSINDLYNLPNDAETPKNE----------------YVVW----LTKKMAREALELHLHQLTTKANVWVFFIKKKIFPTRHDSSINLESAMLMYC
        KV F  + IN+LY+LPND      +                 +VW     T    R  L+L  HQLT +ANVW+FFIKKKIFPT HDS+I  E A+++YC
Subjt:  KVSFNAKSINDLYNLPNDAETPKNE----------------YVVW----LTKKMAREALELHLHQLTTKANVWVFFIKKKIFPTRHDSSINLESAMLMYC

Query:  ILKKWCINLGDLIANTILSWMEAPKGAMPFPSIMEALCLR
        I  K   NLG ++    LSWM  PK A PFP+ ++ LCL+
Subjt:  ILKKWCINLGDLIANTILSWMEAPKGAMPFPSIMEALCLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACTTCATCCATCCCGCAAGATACGAATCAACAAGTGCGTTCTGACGGTCCTGATGTGGAACAAGCTCAATCACGAGGCATAGATGAACAAGTAGTGCCTAGTTA
CACCTTTCTAAAGCACGGTAAAAGGAAGGTGTTGCTGGAGCCCATGCTGGAGCCTGAAGAGTTAGCTAATGAATTGGAAGTGGACATGGATGATAGGAGTGCAGAGCTTG
TGTTCCTCGTAGAGCGAAAACAAAAGAGAGAAGCGGAAGGAAAAGAGAAAAAGGTGGTAGAAGAATGCCAAAAAGAAGAAGAGCAAGAACGAAAAAGATTCGAGGAACGT
CGGAGGGCAGAGGTTGTCTTGATTCAAAAGAAAATCAATGAGAAGCTCTCCAATGTCTCCTTTGCAAAGACGAAGGAGATAATGGCAGCGTTAAAGACCGCCATTCAAAA
GAAGGAACATAAGAAAAAGATGCTCGTCCAATTGGACGAGCAGGTTGCGGAGCTCCCAACGAAGTGCAAGGCGTTGAGAGAAGAGAAGGATGACCTCGAAGCCTTGGCAG
AGGAGTTCAAGGAAGAGTTGAAGGCGATGAGCCTAATTGATCAAGGGCCACCGCCTAAGAAACAAAAGGAGGTCGCCAGGCCATCTAAGATAAAGAAGAAAATAGGGGCA
TCCAGACCTGCGGAACCCCTATCTGGCGGCGAAACCAAGGGAAAAGAGCTCTCAATTCACACGATCATAAAATTGAGAAATGGATTTTTCCCTTTAATGGTACCTTCCCG
AACTTCCTCTACGTGTCGATCCAGGCATTTGGATGGATTTTTTTTTCAAAGGCTGAGGATGGGTGTGGTCAAGAAGTTTTACGTCGCTAAGCCTGATGTCAAGGATTTTA
GCATGCAGTTAAGTGGGATGAAGGTGAGTTTCAACGCGAAATCAATTAATGATCTGTATAACTTGCCTAATGACGCCGAGACACCCAAGAATGAGTATGTGGTCTGGCTT
ACGAAGAAAATGGCCCGTGAAGCATTGGAATTGCATCTCCACCAGCTGACTACTAAGGCAAATGTGTGGGTTTTCTTCATAAAAAAGAAGATATTTCCCACGCGCCATGA
TAGCTCCATCAACCTGGAATCTGCAATGCTTATGTATTGCATATTGAAGAAATGGTGCATCAACCTTGGCGATCTGATTGCTAACACCATCCTTTCTTGGATGGAAGCTC
CCAAGGGCGCCATGCCCTTCCCTTCTATTATGGAGGCTCTTTGCCTAAGGGCTCACCCGTATATATGTGCCGTCACCCAAATGCCAATTTCGGGCGACCTTTGTAGTCTG
GTGGCTTTAAATCACATGATCACTCTCCATGTGCACAAGGAGATTGAGAGGCGGTTAAAGACACTTGGTCAAGAAGACAAAGAGGAGGACGAGACTCAGGTAGAATCCCT
CAAGAGAAAAGCCCCTTCTACCGCATCAACCTCCAAGCCAATCGTAAAAAAATCAAAGGTTGATGCGAAGGCCCAACACCACAACAAAATGGCCCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAACTTCATCCATCCCGCAAGATACGAATCAACAAGTGCGTTCTGACGGTCCTGATGTGGAACAAGCTCAATCACGAGGCATAGATGAACAAGTAGTGCCTAGTTA
CACCTTTCTAAAGCACGGTAAAAGGAAGGTGTTGCTGGAGCCCATGCTGGAGCCTGAAGAGTTAGCTAATGAATTGGAAGTGGACATGGATGATAGGAGTGCAGAGCTTG
TGTTCCTCGTAGAGCGAAAACAAAAGAGAGAAGCGGAAGGAAAAGAGAAAAAGGTGGTAGAAGAATGCCAAAAAGAAGAAGAGCAAGAACGAAAAAGATTCGAGGAACGT
CGGAGGGCAGAGGTTGTCTTGATTCAAAAGAAAATCAATGAGAAGCTCTCCAATGTCTCCTTTGCAAAGACGAAGGAGATAATGGCAGCGTTAAAGACCGCCATTCAAAA
GAAGGAACATAAGAAAAAGATGCTCGTCCAATTGGACGAGCAGGTTGCGGAGCTCCCAACGAAGTGCAAGGCGTTGAGAGAAGAGAAGGATGACCTCGAAGCCTTGGCAG
AGGAGTTCAAGGAAGAGTTGAAGGCGATGAGCCTAATTGATCAAGGGCCACCGCCTAAGAAACAAAAGGAGGTCGCCAGGCCATCTAAGATAAAGAAGAAAATAGGGGCA
TCCAGACCTGCGGAACCCCTATCTGGCGGCGAAACCAAGGGAAAAGAGCTCTCAATTCACACGATCATAAAATTGAGAAATGGATTTTTCCCTTTAATGGTACCTTCCCG
AACTTCCTCTACGTGTCGATCCAGGCATTTGGATGGATTTTTTTTTCAAAGGCTGAGGATGGGTGTGGTCAAGAAGTTTTACGTCGCTAAGCCTGATGTCAAGGATTTTA
GCATGCAGTTAAGTGGGATGAAGGTGAGTTTCAACGCGAAATCAATTAATGATCTGTATAACTTGCCTAATGACGCCGAGACACCCAAGAATGAGTATGTGGTCTGGCTT
ACGAAGAAAATGGCCCGTGAAGCATTGGAATTGCATCTCCACCAGCTGACTACTAAGGCAAATGTGTGGGTTTTCTTCATAAAAAAGAAGATATTTCCCACGCGCCATGA
TAGCTCCATCAACCTGGAATCTGCAATGCTTATGTATTGCATATTGAAGAAATGGTGCATCAACCTTGGCGATCTGATTGCTAACACCATCCTTTCTTGGATGGAAGCTC
CCAAGGGCGCCATGCCCTTCCCTTCTATTATGGAGGCTCTTTGCCTAAGGGCTCACCCGTATATATGTGCCGTCACCCAAATGCCAATTTCGGGCGACCTTTGTAGTCTG
GTGGCTTTAAATCACATGATCACTCTCCATGTGCACAAGGAGATTGAGAGGCGGTTAAAGACACTTGGTCAAGAAGACAAAGAGGAGGACGAGACTCAGGTAGAATCCCT
CAAGAGAAAAGCCCCTTCTACCGCATCAACCTCCAAGCCAATCGTAAAAAAATCAAAGGTTGATGCGAAGGCCCAACACCACAACAAAATGGCCCTTTAA
Protein sequenceShow/hide protein sequence
MATSSIPQDTNQQVRSDGPDVEQAQSRGIDEQVVPSYTFLKHGKRKVLLEPMLEPEELANELEVDMDDRSAELVFLVERKQKREAEGKEKKVVEECQKEEEQERKRFEER
RRAEVVLIQKKINEKLSNVSFAKTKEIMAALKTAIQKKEHKKKMLVQLDEQVAELPTKCKALREEKDDLEALAEEFKEELKAMSLIDQGPPPKKQKEVARPSKIKKKIGA
SRPAEPLSGGETKGKELSIHTIIKLRNGFFPLMVPSRTSSTCRSRHLDGFFFQRLRMGVVKKFYVAKPDVKDFSMQLSGMKVSFNAKSINDLYNLPNDAETPKNEYVVWL
TKKMAREALELHLHQLTTKANVWVFFIKKKIFPTRHDSSINLESAMLMYCILKKWCINLGDLIANTILSWMEAPKGAMPFPSIMEALCLRAHPYICAVTQMPISGDLCSL
VALNHMITLHVHKEIERRLKTLGQEDKEEDETQVESLKRKAPSTASTSKPIVKKSKVDAKAQHHNKMAL