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PI0013824 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013824
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr10:12259710..12264938
RNA-Seq ExpressionPI0013824
SyntenyPI0013824
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066251.1 uncharacterized protein E6C27_scaffold21G002810 [Cucumis melo var. makuwa]2.5e-1873.44Show/hide
Query:  MIQNVGQFGDHPGEDPHKYIRSFYSICASFHMSGISPKELRFALFPLTLRDEAKRWANALEDGK
        MIQN  QF DHPG+DPHKYI SFYSI  SFHM GI   ELRFALFP T+ DEAKRWAN+L+ GK
Subjt:  MIQNVGQFGDHPGEDPHKYIRSFYSICASFHMSGISPKELRFALFPLTLRDEAKRWANALEDGK

XP_038874908.1 uncharacterized protein LOC120067411 [Benincasa hispida]4.3e-1841.44Show/hide
Query:  MLQMIQNVGQFGDHPGEDPHKYIRSFYSICASFHMSGISPKELRFALFPLTLRDEAKRWANALEDGKATQQIADVVFVGGILKSIYNQIKATLDRMASNN
        MLQM+Q  GQF    GEDPH +++ F   C SF + GI+P+ +R +LFP +LRD+AK+W    +  +A+Q +AD    G I+   Y + K  LD +A +N
Subjt:  MLQMIQNVGQFGDHPGEDPHKYIRSFYSICASFHMSGISPKELRFALFPLTLRDEAKRWANALEDGKATQQIADVVFVGGILKSIYNQIKATLDRMASNN

Query:  EEWDEDDFGNR
         EW +D +  R
Subjt:  EEWDEDDFGNR

XP_038874987.1 uncharacterized protein LOC120067509 [Benincasa hispida]8.6e-1941.18Show/hide
Query:  MLQMIQNVGQFGDHPGEDPHKYIRSFYSICASFHMSGISPKELRFALFPLTLRDEAKRWANALEDG----------KATQQIADVVFVGGILKSIYNQIK
        MLQ+IQNVGQF    GEDPH ++ +F  +C +F +  ++P+ +R  LFP TLRDE KRWA +L+            +ATQ I D    GG +   Y + K
Subjt:  MLQMIQNVGQFGDHPGEDPHKYIRSFYSICASFHMSGISPKELRFALFPLTLRDEAKRWANALEDG----------KATQQIADVVFVGGILKSIYNQIK

Query:  ATLDRMASNNEEWDEDDFG
        A L+R++ N ++W +D +G
Subjt:  ATLDRMASNNEEWDEDDFG

XP_038889254.1 uncharacterized protein LOC120079150 [Benincasa hispida]8.0e-1742.86Show/hide
Query:  MLQMIQNVGQFGDHPGEDPHKYIRSFYSICASFHMSGISPKELRFALFPLTLRDEAKRWANALEDGKATQQIADVVFVGGILKSIYNQIKATLDRMASNN
        MLQM+Q   QFG   GEDPH +++ F   C SF + GI+P+ +R +LFP +LRD+AK+WA++LE  + T           I+   YN+ K  LDR+A +N
Subjt:  MLQMIQNVGQFGDHPGEDPHKYIRSFYSICASFHMSGISPKELRFALFPLTLRDEAKRWANALEDGKATQQIADVVFVGGILKSIYNQIKATLDRMASNN

Query:  EEWDE
         EW++
Subjt:  EEWDE

XP_038896304.1 uncharacterized protein LOC120084573 [Benincasa hispida]6.6e-1937.16Show/hide
Query:  MLQMIQNVGQFGDHPGEDPHKYIRSFYSICASFHMSGISPKELRFALFPLTLRDEAKRWANALED-------------GKATQQIADVVFVGGILKSIYN
        MLQMIQN G+FG   GED H ++ SF  +C +F +  ++P+ +R  LFP TL+DEAKRWA +LE               ++TQ +AD    GG++   Y 
Subjt:  MLQMIQNVGQFGDHPGEDPHKYIRSFYSICASFHMSGISPKELRFALFPLTLRDEAKRWANALED-------------GKATQQIADVVFVGGILKSIYN

Query:  QIKATLDRMASNNEEWDEDDFGNRQGGRGRSDEG-MDKTTMVALQRQM
        + K  LDR++ N  EW ++ +  R   + R++   +   TM  L  QM
Subjt:  QIKATLDRMASNNEEWDEDDFGNRQGGRGRSDEG-MDKTTMVALQRQM

TrEMBL top hitse value%identityAlignment
A0A5A7TNS8 Uncharacterized protein2.1e-1542.72Show/hide
Query:  MLQMIQNVGQFGDHPGEDPHKYIRSFYSICASFHMSGISPKELRFALFPLTLRDEAKRWANALEDGKATQQIADVVF--VGGILKSIYNQIKATLDRMAS
        ML MIQ   QFG +  EDP  +I+S Y +C+SFH+  +S ++L    F  TL+D+ K+W   LE  +ATQ   D +F   G +++  Y QIK TLD M+ 
Subjt:  MLQMIQNVGQFGDHPGEDPHKYIRSFYSICASFHMSGISPKELRFALFPLTLRDEAKRWANALEDGKATQQIADVVF--VGGILKSIYNQIKATLDRMAS

Query:  NNE
        N+E
Subjt:  NNE

A0A5A7TRN6 Retrotrans_gag domain-containing protein1.4e-1156.25Show/hide
Query:  MLQMIQNVGQFGDHPGEDPHKYIRSFYSICASFHMSGISPKELRFALFPLTLRDEAKRWANALE
        ML  IQN GQF  +PGED + YI+SFYSI +SFH+S I+  ELR  LFP TL+D+ + W +A+E
Subjt:  MLQMIQNVGQFGDHPGEDPHKYIRSFYSICASFHMSGISPKELRFALFPLTLRDEAKRWANALE

A0A5A7V2U7 Putative disease resistance RPP13-like protein 11.9e-1172Show/hide
Query:  MLQMIQNVGQFGDHPGEDPHKYIRSFYSICASFHMSGISPKELRFALFPL
        MLQ+IQN GQF  HP +DPH YIR+FYSICASFHM GIS +ELRF  F L
Subjt:  MLQMIQNVGQFGDHPGEDPHKYIRSFYSICASFHMSGISPKELRFALFPL

A0A5D3BCV5 Uncharacterized protein1.2e-1873.44Show/hide
Query:  MIQNVGQFGDHPGEDPHKYIRSFYSICASFHMSGISPKELRFALFPLTLRDEAKRWANALEDGK
        MIQN  QF DHPG+DPHKYI SFYSI  SFHM GI   ELRFALFP T+ DEAKRWAN+L+ GK
Subjt:  MIQNVGQFGDHPGEDPHKYIRSFYSICASFHMSGISPKELRFALFPLTLRDEAKRWANALEDGK

U5CUK7 Uncharacterized protein1.4e-1150.72Show/hide
Query:  MLQMIQNVGQFGDHPGEDPHKYIRSFYSICASFHMSGISPKELRFALFPLTLRDEAKRWANALEDGKAT
        M QM+Q VGQFG  P EDPH +IRSF  +  SF + G+S + LR  LFP +LRD A+ W N L     T
Subjt:  MLQMIQNVGQFGDHPGEDPHKYIRSFYSICASFHMSGISPKELRFALFPLTLRDEAKRWANALEDGKAT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGCAGATGATCCAGAACGTTGGACAATTTGGCGATCATCCTGGGGAGGATCCACACAAGTATATCAGAAGTTTCTACTCTATTTGCGCTTCCTTCCATATGTCTGG
CATATCGCCTAAAGAGCTGCGGTTTGCCCTCTTCCCATTAACCCTAAGAGATGAGGCAAAGAGATGGGCGAATGCCTTGGAAGACGGGAAGGCGACACAACAAATTGCTG
ATGTTGTGTTTGTGGGTGGTATTTTGAAAAGCATATACAACCAGATTAAGGCGACACTAGATAGAATGGCCAGCAACAATGAAGAATGGGATGAAGATGATTTTGGCAAT
CGCCAAGGAGGACGAGGAAGAAGTGATGAGGGAATGGATAAGACCACGATGGTGGCATTGCAAAGACAGATGACTGATAAAGGCATACCAAACGAGGATGTGGACAGCAT
GAGTGGGCTTGGGCTTGGGCTTGTGGGCTTGGCACTTATGGTAGATTGCAATGCGTTTTGGTCTTGCTTGCAGAGTAGGCGAGCTTGGCGTCTGCGGCAAAGCACGCGAG
CTTGTCAGGTAGATGTTGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTGCAGATGATCCAGAACGTTGGACAATTTGGCGATCATCCTGGGGAGGATCCACACAAGTATATCAGAAGTTTCTACTCTATTTGCGCTTCCTTCCATATGTCTGG
CATATCGCCTAAAGAGCTGCGGTTTGCCCTCTTCCCATTAACCCTAAGAGATGAGGCAAAGAGATGGGCGAATGCCTTGGAAGACGGGAAGGCGACACAACAAATTGCTG
ATGTTGTGTTTGTGGGTGGTATTTTGAAAAGCATATACAACCAGATTAAGGCGACACTAGATAGAATGGCCAGCAACAATGAAGAATGGGATGAAGATGATTTTGGCAAT
CGCCAAGGAGGACGAGGAAGAAGTGATGAGGGAATGGATAAGACCACGATGGTGGCATTGCAAAGACAGATGACTGATAAAGGCATACCAAACGAGGATGTGGACAGCAT
GAGTGGGCTTGGGCTTGGGCTTGTGGGCTTGGCACTTATGGTAGATTGCAATGCGTTTTGGTCTTGCTTGCAGAGTAGGCGAGCTTGGCGTCTGCGGCAAAGCACGCGAG
CTTGTCAGGTAGATGTTGAATGA
Protein sequenceShow/hide protein sequence
MLQMIQNVGQFGDHPGEDPHKYIRSFYSICASFHMSGISPKELRFALFPLTLRDEAKRWANALEDGKATQQIADVVFVGGILKSIYNQIKATLDRMASNNEEWDEDDFGN
RQGGRGRSDEGMDKTTMVALQRQMTDKGIPNEDVDSMSGLGLGLVGLALMVDCNAFWSCLQSRRAWRLRQSTRACQVDVE