CuGenDBv2

Gene ID	PI0013833
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Protein TonB isoform X1
Genome location	chr08:23288682..23289070
RNA-Seq Expression	PI0013833
Synteny	PI0013833
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6580427.1 hypothetical protein SDJN03_20429, partial [Cucurbita argyrosperma subsp. sororia]

4.9e-19

54.05

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Query:  KTLFLRLPSLDQLPTPVNGVYFLILAVLIFGGSWACCK-------------IFLSLKLLKVGIRVGMMIGMN---------KNSVKSPGRRHIGNISPNG
        + LFL LPS DQL TPVNG YFLILAVLIFGGSWACCK             + ++L      + V    G +         +N+VKSPG RHIG+IS NG
Subjt:  KTLFLRLPSLDQLPTPVNGVYFLILAVLIFGGSWACCK-------------IFLSLKLLKVGIRVGMMIGMN---------KNSVKSPGRRHIGNISPNG

Query:  LTARSNKDGWE
        LTARSNKDGWE
Subjt:  LTARSNKDGWE

KAG7017185.1 hypothetical protein SDJN02_19047 [Cucurbita argyrosperma subsp. argyrosperma]

4.9e-19

54.05

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Query:  KTLFLRLPSLDQLPTPVNGVYFLILAVLIFGGSWACCK-------------IFLSLKLLKVGIRVGMMIGMN---------KNSVKSPGRRHIGNISPNG
        + LFL LPS DQL TPVNG YFLILAVLIFGGSWACCK             + ++L      + V    G +         +N+VKSPG RHIG+IS NG
Subjt:  KTLFLRLPSLDQLPTPVNGVYFLILAVLIFGGSWACCK-------------IFLSLKLLKVGIRVGMMIGMN---------KNSVKSPGRRHIGNISPNG

Query:  LTARSNKDGWE
        LTARSNKDGWE
Subjt:  LTARSNKDGWE

XP_022935129.1 uncharacterized protein LOC111442092 [Cucurbita moschata]

4.9e-19

54.05

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Query:  KTLFLRLPSLDQLPTPVNGVYFLILAVLIFGGSWACCK-------------IFLSLKLLKVGIRVGMMIGMN---------KNSVKSPGRRHIGNISPNG
        + LFL LPS DQL TPVNG YFLILAVLIFGGSWACCK             + ++L      + V    G +         +N+VKSPG RHIG+IS NG
Subjt:  KTLFLRLPSLDQLPTPVNGVYFLILAVLIFGGSWACCK-------------IFLSLKLLKVGIRVGMMIGMN---------KNSVKSPGRRHIGNISPNG

Query:  LTARSNKDGWE
        LTARSNKDGWE
Subjt:  LTARSNKDGWE

XP_023528429.1 uncharacterized protein LOC111791362 [Cucurbita pepo subsp. pepo]

1.9e-18

52.25

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Query:  KTLFLRLPSLDQLPTPVNGVYFLILAVLIFGGSWACCK-------------IFLSLKLLKVGIRVGMMIGMN---------KNSVKSPGRRHIGNISPNG
        + LFL LPS DQL TPVNG YFL LAVLIFGGSWACCK             + ++L      + +    G +         +N+VKSPG RHIG+IS NG
Subjt:  KTLFLRLPSLDQLPTPVNGVYFLILAVLIFGGSWACCK-------------IFLSLKLLKVGIRVGMMIGMN---------KNSVKSPGRRHIGNISPNG

Query:  LTARSNKDGWE
        LTARSNKDGWE
Subjt:  LTARSNKDGWE

XP_038904076.1 uncharacterized protein LOC120090465 [Benincasa hispida]

4.2e-18

54.13

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Query:  LFLRLPSLDQLPTPVNGVYFLILAVLIFGGSWACCK-------------IFLSLKLLKVGIRVGMMIGMN---------KNSVKSPGRRHIGNISPNGLT
        LFL LPS DQL TPVNG YFLILAVLIFGGSWA CK             + +++      + +    G +         +NSVKSPG RHIGNIS NGLT
Subjt:  LFLRLPSLDQLPTPVNGVYFLILAVLIFGGSWACCK-------------IFLSLKLLKVGIRVGMMIGMN---------KNSVKSPGRRHIGNISPNGLT

Query:  ARSNKDGWE
        ARSNKDGWE
Subjt:  ARSNKDGWE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LD85 Uncharacterized protein

2.4e-35

81.9

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Query:  MESACFTQALLFLDKTLFLRLPSLDQLPTPVNGVYFLILAVLIFGGSWACC--KIFLSLKLLKVGIRVGMMIGMNKNSVKSPGRRHIGNISPNGLTARSN
        MESAC TQALLFLDKTLFLRLPSLDQL TPV G YFLILAVLI   SWACC  +IFLSL+LLK    VGMMIGMNKNSV SPGR HIGNIS N LTARSN
Subjt:  MESACFTQALLFLDKTLFLRLPSLDQLPTPVNGVYFLILAVLIFGGSWACC--KIFLSLKLLKVGIRVGMMIGMNKNSVKSPGRRHIGNISPNGLTARSN

Query:  KDGWE
        KDGWE
Subjt:  KDGWE

A0A6J1F4I5 uncharacterized protein LOC111442092

2.4e-19

54.05

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Query:  KTLFLRLPSLDQLPTPVNGVYFLILAVLIFGGSWACCK-------------IFLSLKLLKVGIRVGMMIGMN---------KNSVKSPGRRHIGNISPNG
        + LFL LPS DQL TPVNG YFLILAVLIFGGSWACCK             + ++L      + V    G +         +N+VKSPG RHIG+IS NG
Subjt:  KTLFLRLPSLDQLPTPVNGVYFLILAVLIFGGSWACCK-------------IFLSLKLLKVGIRVGMMIGMN---------KNSVKSPGRRHIGNISPNG

Query:  LTARSNKDGWE
        LTARSNKDGWE
Subjt:  LTARSNKDGWE

A0A6J1FLM5 uncharacterized protein LOC111446930

1.3e-17

55.05

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Query:  LFLRLPSLDQLPTPVNGVYFLILAVLIFGGSWACCKI---------FLSLKL--------LKVGIRVGMMIGMN-----KNSVKSPGRRHIGNISPNGLT
        LFL LPS DQL TPVNG YFLILAVLIFGGSWAC K+         +  L++        +KV    G   G +     +N+VKSPG RHIG+IS NGLT
Subjt:  LFLRLPSLDQLPTPVNGVYFLILAVLIFGGSWACCKI---------FLSLKL--------LKVGIRVGMMIGMN-----KNSVKSPGRRHIGNISPNGLT

Query:  ARSNKDGWE
        AR NKDGWE
Subjt:  ARSNKDGWE

A0A6J1I2Q4 uncharacterized protein LOC111470002

2.6e-18

53.91

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Query:  LFLDKTLFLRLPSLDQLPTPVNGVYFLILAVLIFGGSWACCKI---------FLSLKL--------LKVGIRVGMMIGMN-----KNSVKSPGRRHIGNI
        L   + LFL LPS DQL TPVNG YFLILAVLIFGGSWAC K+         +  L++        +KV   VG   G +     +N+VKSPG RHIG+I
Subjt:  LFLDKTLFLRLPSLDQLPTPVNGVYFLILAVLIFGGSWACCKI---------FLSLKL--------LKVGIRVGMMIGMN-----KNSVKSPGRRHIGNI

Query:  SPNGLTARSNKDGWE
        S NGLTAR NKDGWE
Subjt:  SPNGLTARSNKDGWE

A0A6J1J516 uncharacterized protein LOC111481426

1.7e-17

53.15

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Query:  KTLFLRLPSLDQLPTPVNGVYFLILAVLIFGGSWACCK-------------IFLSLKLLKVGIRVGMMIGMN---------KNSVKSPGRRHIGNISPNG
        + LFL LPS DQL TPVNG YFLILAVL FGGSWACCK             + ++L      + V    G +         +N+VKSPG RHIG+IS NG
Subjt:  KTLFLRLPSLDQLPTPVNGVYFLILAVLIFGGSWACCK-------------IFLSLKLLKVGIRVGMMIGMN---------KNSVKSPGRRHIGNISPNG

Query:  LTARSNKDGWE
        LTARSNKDGWE
Subjt:  LTARSNKDGWE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G51580.1 unknown protein

4.2e-08

35.29

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Query:  DKTLFLRLPSLDQLPTPVNGVYFLILAVLIFGGSWACCKIFLSLKL----------LKVGIRVGMMIGMN-----------------KNSVKSPGRRHIG
        + TL    PS ++L TP+NG YFLI++V+IFGG WA C    + +           L  G  +    G++                  N+VKSPG     
Subjt:  DKTLFLRLPSLDQLPTPVNGVYFLILAVLIFGGSWACCKIFLSLKL----------LKVGIRVGMMIGMN-----------------KNSVKSPGRRHIG

Query:  -NISPNGLTARS-NKDGWE
         +IS NGLTAR+ N+DGW+
Subjt:  -NISPNGLTARS-NKDGWE

AT3G51580.2 unknown protein

4.2e-08

35.29

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Query:  DKTLFLRLPSLDQLPTPVNGVYFLILAVLIFGGSWACCKIFLSLKL----------LKVGIRVGMMIGMN-----------------KNSVKSPGRRHIG
        + TL    PS ++L TP+NG YFLI++V+IFGG WA C    + +           L  G  +    G++                  N+VKSPG     
Subjt:  DKTLFLRLPSLDQLPTPVNGVYFLILAVLIFGGSWACCKIFLSLKL----------LKVGIRVGMMIGMN-----------------KNSVKSPGRRHIG

Query:  -NISPNGLTARS-NKDGWE
         +IS NGLTAR+ N+DGW+
Subjt:  -NISPNGLTARS-NKDGWE

Sequences

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CDS sequence

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ATGGAGAGTGCGTGCTTTACACAAGCCCTCTTGTTTCTGGACAAGACACTTTTTCTGCGTCTCCCCTCATTAGACCAGCTACCAACACCAGTAAACGGTGTGTATTTCTT
AATTCTTGCAGTCCTAATCTTTGGGGGGTCTTGGGCTTGCTGCAAAATCTTCCTCAGCTTGAAACTGCTGAAGGTTGGGATCAGGGTTGGGATGATGATTGGGATGAATA
AAAATTCTGTGAAATCACCAGGGAGGCGTCATATTGGAAACATTTCACCAAATGGCCTTACTGCTAGGTCCAATAAAGATGGGTGGGAGATGATTGGGATGTTTAGTTAA

mRNA sequence

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Protein sequence

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MESACFTQALLFLDKTLFLRLPSLDQLPTPVNGVYFLILAVLIFGGSWACCKIFLSLKLLKVGIRVGMMIGMNKNSVKSPGRRHIGNISPNGLTARSNKDGWEMIGMFS

PI0013833 (gene) of Melon (PI 482460) v1 genome